Guide to the Human Genome
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Name: NUDT3 Sequence: fasta or formatted (172aa) NCBI GI: 5729804
Description:

nudix-type motif 3

Referenced in:

Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         10           2
 C cysteine            1.7          3           1
 D aspartate           3.5          6           1
 E glutamate          11.0         19           3
 F phenylalanine       2.3          4           1
 G glycine             7.6         13           3
 H histidine           1.7          3           1
 I isoleucine          4.1          7           1
 K lysine              5.8         10           2
 L leucine             5.8         10           2
 M methionine          2.3          4           2
 N asparagine          2.9          5           2
 P proline             3.5          6           1
 Q glutamine           3.5          6           1
 R arginine            7.6         13           1
 S serine              8.7         15           3
 T threonine           5.2          9           2
 V valine             10.5         18           2
 W tryptophan          1.7          3           1
 Y tyrosine            4.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nudix-type motif 3 
NUDT4                 0.719   nudix-type motif 4 isoform alpha 
NUDT4                 0.704   nudix-type motif 4 isoform beta 
NUDT11                0.691   nudix-type motif 11 
NUDT10                0.682   nudix-type motif 10 
NUDT6                 0.052   nudix-type motif 6 isoform a 
NUDT2                 0.049   nudix-type motif 2 
NUDT2                 0.049   nudix-type motif 2 
NUDT2                 0.049   nudix-type motif 2 
NUDT6                 0.043   nudix-type motif 6 isoform b 
NUDT17                0.037   nudix (nucleoside diphosphate linked moiety X)-type ...
NUDT18                0.037   nudix (nucleoside diphosphate linked moiety X)-type...
DCP2                  0.025   DCP2 decapping enzyme 
NUDT5                 0.012   nudix-type motif 5 
LARP6                 0.009   La ribonucleoprotein domain family, member 6 isoform...
LARP6                 0.009   La ribonucleoprotein domain family, member 6 isoform...
UBN1                  0.009   ubinuclein 1 
UBN1                  0.009   ubinuclein 1 
NUDT9                 0.009   nudix-type motif 9 isoform b 
NUDT9                 0.009   nudix-type motif 9 isoform a 
KIAA1688              0.009   KIAA1688 protein 
SIPA1L3               0.006   signal-induced proliferation-associated 1 like 3 [Ho...
BIN2                  0.006   bridging integrator 2 
ARHGAP29              0.006   PTPL1-associated RhoGAP 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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