Guide to the Human Genome
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Name: NUDT6 Sequence: fasta or formatted (316aa) NCBI GI: 20149583
Description:

nudix-type motif 6 isoform a

Referenced in:

Fibroblast Growth Factors
Nucleotide Pathways

Other entries for this name:
alt prot [147aa] nudix-type motif 6 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         26           3
 C cysteine            1.9          6           1
 D aspartate           5.1         16           1
 E glutamate           6.6         21           2
 F phenylalanine       4.4         14           1
 G glycine             8.5         27           2
 H histidine           1.9          6           2
 I isoleucine          4.4         14           2
 K lysine              4.4         14           1
 L leucine            10.1         32           3
 M methionine          1.9          6           1
 N asparagine          2.5          8           1
 P proline             5.1         16           2
 Q glutamine           4.1         13           2
 R arginine            7.9         25           1
 S serine              6.3         20           2
 T threonine           5.1         16           2
 V valine              5.1         16           2
 W tryptophan          2.5          8           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nudix-type motif 6 isoform a 
NUDT6                 0.451   nudix-type motif 6 isoform b 
NUDT10                0.040   nudix-type motif 10 
NUDT4                 0.038   nudix-type motif 4 isoform beta 
NUDT11                0.035   nudix-type motif 11 
NUDT4                 0.033   nudix-type motif 4 isoform alpha 
NUDT3                 0.027   nudix-type motif 3 
NUDT18                0.026   nudix (nucleoside diphosphate linked moiety X)-type...
DCP2                  0.024   DCP2 decapping enzyme 
NUDT17                0.019   nudix (nucleoside diphosphate linked moiety X)-type ...
NUDT2                 0.016   nudix-type motif 2 
NUDT2                 0.016   nudix-type motif 2 
NUDT2                 0.016   nudix-type motif 2 
NUDT13                0.011   nudix-type motif 13 
CD36                  0.008   CD36 antigen 
CD36                  0.008   CD36 antigen 
CD36                  0.008   CD36 antigen 
CD36                  0.008   CD36 antigen 
CD36                  0.008   CD36 antigen 
CHSY1                 0.008   chondroitin sulfate synthase 1 
RHPN1                 0.006   rhophilin 1 
NUDT8                 0.005   nudix-type motif 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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