Guide to the Human Genome
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Name: NUDT22 Sequence: fasta or formatted (270aa) NCBI GI: 190684699
Description:

nudix (nucleoside diphosphate linked moiety X)-type motif 22 isoform b

Referenced in:

Nucleotide Pathways

Other entries for this name:
alt prot [303aa] nudix (nucleoside diphosphate linked moiety X)-type motif 22 isof...
alt prot [303aa] nudix (nucleoside diphosphate linked moiety X)-type motif 22 isof...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1         30           2
 C cysteine            1.1          3           1
 D aspartate           4.1         11           2
 E glutamate           5.9         16           1
 F phenylalanine       3.0          8           2
 G glycine             9.3         25           3
 H histidine           1.9          5           1
 I isoleucine          3.0          8           2
 K lysine              1.5          4           1
 L leucine            14.4         39           3
 M methionine          0.7          2           1
 N asparagine          1.9          5           1
 P proline             8.9         24           2
 Q glutamine           5.9         16           2
 R arginine            6.3         17           2
 S serine              6.7         18           3
 T threonine           5.9         16           1
 V valine              4.4         12           1
 W tryptophan          2.2          6           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nudix (nucleoside diphosphate linked moiety X)-type... 
NUDT22                0.967   nudix (nucleoside diphosphate linked moiety X)-type...
NUDT22                0.967   nudix (nucleoside diphosphate linked moiety X)-type ...
AHDC1                 0.015   AT hook, DNA binding motif, containing 1 
NUDT17                0.013   nudix (nucleoside diphosphate linked moiety X)-type ...
TRAP1                 0.011   TNF receptor-associated protein 1 
PKHD1                 0.008   fibrocystin isoform 2 
PKHD1                 0.008   fibrocystin isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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