Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NUDT2 Sequence: fasta or formatted (147aa) NCBI GI: 4502125
Description:

nudix-type motif 2

Referenced in:

Nucleotide Pathways

Other entries for this name:
alt mRNA [147aa] nudix-type motif 2
alt mRNA [147aa] nudix-type motif 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         15           2
 C cysteine            2.7          4           1
 D aspartate           4.1          6           2
 E glutamate          12.2         18           2
 F phenylalanine       3.4          5           1
 G glycine             6.1          9           1
 H histidine           4.1          6           2
 I isoleucine          7.5         11           2
 K lysine              5.4          8           1
 L leucine            11.6         17           3
 M methionine          1.4          2           1
 N asparagine          2.7          4           2
 P proline             3.4          5           2
 Q glutamine           5.4          8           1
 R arginine            5.4          8           2
 S serine              2.0          3           1
 T threonine           3.4          5           1
 V valine              4.1          6           1
 W tryptophan          2.0          3           1
 Y tyrosine            2.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nudix-type motif 2 
NUDT2                 1.000   nudix-type motif 2 
NUDT2                 1.000   nudix-type motif 2 
NUDT3                 0.058   nudix-type motif 3 
NUDT4                 0.050   nudix-type motif 4 isoform beta 
NUDT11                0.050   nudix-type motif 11 
NUDT4                 0.050   nudix-type motif 4 isoform alpha 
NUDT10                0.047   nudix-type motif 10 
NUDT17                0.036   nudix (nucleoside diphosphate linked moiety X)-type ...
NUDT6                 0.036   nudix-type motif 6 isoform a 
NUDT18                0.036   nudix (nucleoside diphosphate linked moiety X)-type...
NUDT6                 0.032   nudix-type motif 6 isoform b 
HSPG2                 0.022   heparan sulfate proteoglycan 2 
NUDT15                0.022   nudix-type motif 15 
SKIV2L                0.022   superkiller viralicidic activity 2-like homolog [Hom...
NUDT7                 0.022   nudix motif 7 
NUDT12                0.018   nudix-type motif 12 
NUDT9                 0.011   nudix-type motif 9 isoform b 
NUDT9                 0.011   nudix-type motif 9 isoform a 
ECD                   0.011   suppressor of S. cerevisiae gcr2 isoform 3 
ECD                   0.011   suppressor of S. cerevisiae gcr2 isoform 2 
ECD                   0.011   suppressor of S. cerevisiae gcr2 isoform 1 
NUDT8                 0.011   nudix-type motif 8 
CENPF                 0.011   centromere protein F 
SYNE1                 0.007   spectrin repeat containing, nuclear envelope 1 isof...
SYNE1                 0.007   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.007   spectrin repeat containing, nuclear envelope 1 isof...
CT47A1                0.007   cancer/testis antigen family 47, member A1 
CT47A2                0.007   cancer/testis antigen family 47, member A2 
CT47A3                0.007   cancer/testis antigen family 47, member A3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press