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Search of human proteins with 62530391
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62530391 selenoprotein P isoform 1 precursor [Homo sapiens]
(381 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148277018 selenoprotein P isoform 1 precursor [Homo sapiens] 773 0.0
gi|148277022 selenoprotein P isoform 2 [Homo sapiens] 773 0.0
gi|62530391 selenoprotein P isoform 1 precursor [Homo sapiens] 773 0.0
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 44 3e-04
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 44 3e-04
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 44 3e-04
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa... 44 3e-04
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 43 4e-04
gi|61966923 forkhead box B2 [Homo sapiens] 43 5e-04
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 41 0.002
gi|27894361 nuclear receptor subfamily 4, group A, member 3 isof... 40 0.003
gi|27894359 nuclear receptor subfamily 4, group A, member 3 isof... 40 0.003
gi|27894357 nuclear receptor subfamily 4, group A, member 3 isof... 40 0.003
gi|27894355 nuclear receptor subfamily 4, group A, member 3 isof... 40 0.003
gi|18765752 dual-specificity tyrosine-(Y)-phosphorylation regula... 40 0.005
gi|18765758 dual-specificity tyrosine-(Y)-phosphorylation regula... 40 0.005
gi|32698730 nuclear fragile X mental retardation protein interac... 39 0.006
gi|17978466 cyclin T1 [Homo sapiens] 38 0.013
gi|119220564 one cut domain, family member 2 [Homo sapiens] 37 0.023
gi|23308699 transcription factor MAFB [Homo sapiens] 37 0.030
gi|40288197 GATA binding protein 6 [Homo sapiens] 37 0.030
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 37 0.030
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 37 0.039
gi|5031761 homeobox A1 isoform a [Homo sapiens] 37 0.039
gi|55770830 chromobox homolog 4 [Homo sapiens] 37 0.039
gi|59938776 cAMP responsive element binding protein 5 isoform de... 36 0.050
gi|59938774 cAMP responsive element binding protein 5 isoform be... 36 0.050
gi|59938772 cAMP responsive element binding protein 5 isoform ga... 36 0.050
gi|59938770 cAMP responsive element binding protein 5 isoform al... 36 0.050
gi|4504489 histidine-rich glycoprotein precursor [Homo sapiens] 36 0.050
>gi|148277018 selenoprotein P isoform 1 precursor [Homo sapiens]
Length = 381
Score = 773 bits (1997), Expect = 0.0
Identities = 381/381 (100%), Positives = 381/381 (100%)
Query: 1 MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASUY 60
MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQAS Y
Sbjct: 1 MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASUY 60
Query: 61 LCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQ 120
LCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQ
Sbjct: 61 LCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQ 120
Query: 121 TDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTL 180
TDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTL
Sbjct: 121 TDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTL 180
Query: 181 KDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP 240
KDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP
Sbjct: 181 KDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP 240
Query: 241 PGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRSU 300
PGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRS
Sbjct: 241 PGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRSU 300
Query: 301 CCHCRHLIFEKTGSAITUQCKENLPSLCSUQGLRAEENITESCQURLPPAAUQISQQLIP 360
CCHCRHLIFEKTGSAIT QCKENLPSLCS QGLRAEENITESCQ RLPPAA QISQQLIP
Sbjct: 301 CCHCRHLIFEKTGSAITUQCKENLPSLCSUQGLRAEENITESCQURLPPAAUQISQQLIP 360
Query: 361 TEASASURUKNQAKKUEUPSN 381
TEASAS R KNQAKK E PSN
Sbjct: 361 TEASASURUKNQAKKUEUPSN 381
>gi|148277022 selenoprotein P isoform 2 [Homo sapiens]
Length = 411
Score = 773 bits (1997), Expect = 0.0
Identities = 381/381 (100%), Positives = 381/381 (100%)
Query: 1 MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASUY 60
MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQAS Y
Sbjct: 31 MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASUY 90
Query: 61 LCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQ 120
LCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQ
Sbjct: 91 LCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQ 150
Query: 121 TDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTL 180
TDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTL
Sbjct: 151 TDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTL 210
Query: 181 KDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP 240
KDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP
Sbjct: 211 KDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP 270
Query: 241 PGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRSU 300
PGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRS
Sbjct: 271 PGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRSU 330
Query: 301 CCHCRHLIFEKTGSAITUQCKENLPSLCSUQGLRAEENITESCQURLPPAAUQISQQLIP 360
CCHCRHLIFEKTGSAIT QCKENLPSLCS QGLRAEENITESCQ RLPPAA QISQQLIP
Sbjct: 331 CCHCRHLIFEKTGSAITUQCKENLPSLCSUQGLRAEENITESCQURLPPAAUQISQQLIP 390
Query: 361 TEASASURUKNQAKKUEUPSN 381
TEASAS R KNQAKK E PSN
Sbjct: 391 TEASASURUKNQAKKUEUPSN 411
>gi|62530391 selenoprotein P isoform 1 precursor [Homo sapiens]
Length = 381
Score = 773 bits (1997), Expect = 0.0
Identities = 381/381 (100%), Positives = 381/381 (100%)
Query: 1 MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASUY 60
MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQAS Y
Sbjct: 1 MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASUY 60
Query: 61 LCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQ 120
LCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQ
Sbjct: 61 LCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQ 120
Query: 121 TDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTL 180
TDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTL
Sbjct: 121 TDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTL 180
Query: 181 KDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP 240
KDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP
Sbjct: 181 KDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP 240
Query: 241 PGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRSU 300
PGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRS
Sbjct: 241 PGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRSU 300
Query: 301 CCHCRHLIFEKTGSAITUQCKENLPSLCSUQGLRAEENITESCQURLPPAAUQISQQLIP 360
CCHCRHLIFEKTGSAIT QCKENLPSLCS QGLRAEENITESCQ RLPPAA QISQQLIP
Sbjct: 301 CCHCRHLIFEKTGSAITUQCKENLPSLCSUQGLRAEENITESCQURLPPAAUQISQQLIP 360
Query: 361 TEASASURUKNQAKKUEUPSN 381
TEASAS R KNQAKK E PSN
Sbjct: 361 TEASASURUKNQAKKUEUPSN 381
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 43.5 bits (101), Expect = 3e-04
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 13/62 (20%)
Query: 203 PHYHHEHHHNHGHQH-------------LGSSELSENQQPGAPNAPTHPAPPGLHHHHKH 249
PH+HH HH+H H H SE P P P P PP L H H
Sbjct: 654 PHHHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHH 713
Query: 250 KG 251
+G
Sbjct: 714 RG 715
Score = 35.4 bits (80), Expect = 0.086
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 12/76 (15%)
Query: 201 PSPHYHH----------EHHHNHGHQHLGSSELSEN--QQPGAPNAPTHPAPPGLHHHHK 248
P+PH+ H +HH+ + +G + +E+ + GA H A HHHH
Sbjct: 600 PAPHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKLHGASAGAPHSAQTHPHHHHH 659
Query: 249 HKGQHRQGHPENRDMP 264
H HP P
Sbjct: 660 PHHHHHHHHPPQPPSP 675
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 43.5 bits (101), Expect = 3e-04
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 13/62 (20%)
Query: 203 PHYHHEHHHNHGHQH-------------LGSSELSENQQPGAPNAPTHPAPPGLHHHHKH 249
PH+HH HH+H H H SE P P P P PP L H H
Sbjct: 654 PHHHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHH 713
Query: 250 KG 251
+G
Sbjct: 714 RG 715
Score = 35.4 bits (80), Expect = 0.086
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 12/76 (15%)
Query: 201 PSPHYHH----------EHHHNHGHQHLGSSELSEN--QQPGAPNAPTHPAPPGLHHHHK 248
P+PH+ H +HH+ + +G + +E+ + GA H A HHHH
Sbjct: 600 PAPHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKLHGASAGAPHSAQTHPHHHHH 659
Query: 249 HKGQHRQGHPENRDMP 264
H HP P
Sbjct: 660 PHHHHHHHHPPQPPSP 675
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 43.5 bits (101), Expect = 3e-04
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 13/62 (20%)
Query: 203 PHYHHEHHHNHGHQH-------------LGSSELSENQQPGAPNAPTHPAPPGLHHHHKH 249
PH+HH HH+H H H SE P P P P PP L H H
Sbjct: 654 PHHHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHH 713
Query: 250 KG 251
+G
Sbjct: 714 RG 715
Score = 35.4 bits (80), Expect = 0.086
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 12/76 (15%)
Query: 201 PSPHYHH----------EHHHNHGHQHLGSSELSEN--QQPGAPNAPTHPAPPGLHHHHK 248
P+PH+ H +HH+ + +G + +E+ + GA H A HHHH
Sbjct: 600 PAPHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKLHGASAGAPHSAQTHPHHHHH 659
Query: 249 HKGQHRQGHPENRDMP 264
H HP P
Sbjct: 660 PHHHHHHHHPPQPPSP 675
>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
sapiens]
Length = 443
Score = 43.5 bits (101), Expect = 3e-04
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 16/75 (21%)
Query: 206 HHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPENRDMPA 265
HH HH H H H +QQP P P PPG H G H H + D P
Sbjct: 223 HHADHHPHPHSH-------PHQQPPPPPPPQ--GPPG------HPGAHHDPH-SDEDTPT 266
Query: 266 SEDLQDLQKKLCRKR 280
S+DL+ K+ ++R
Sbjct: 267 SDDLEQFAKQFKQRR 281
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 43.1 bits (100), Expect = 4e-04
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 11/82 (13%)
Query: 199 ETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHP 258
+TP HH HHH+H H H Q P A PGL+ H H
Sbjct: 263 DTPELAEHHHHHHHHAHPH--PPHPHHAQGPPHHGGGGGGAGPGLNSHDPH--------- 311
Query: 259 ENRDMPASEDLQDLQKKLCRKR 280
+ D P S+DL+ K+ ++R
Sbjct: 312 SDEDTPTSDDLEQFAKQFKQRR 333
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 42.7 bits (99), Expect = 5e-04
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 204 HYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGL-HHHHKHKGQHRQGHPENRD 262
H HH HH +H H H ++ + P P P P PP + H+ H+ Q P
Sbjct: 137 HPHHHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPS 196
Query: 263 MPASEDLQDLQ 273
P + Q Q
Sbjct: 197 QPPQQPPQQSQ 207
Score = 37.0 bits (84), Expect = 0.030
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 212 NHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGH 257
+H H H GS++ + PG P H P HHHH H H H
Sbjct: 115 DHTHLHAGSTKSAPGAGPGGHLHPHHHHHPH-HHHHHHAAAHHHHH 159
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 41.2 bits (95), Expect = 0.002
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 15/60 (25%)
Query: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPEN 260
P PH+HH HHH+H H H QP P HP HHH+ + H PE+
Sbjct: 334 PPPHHHHHHHHHHHHHH-------HRAQP--PQQSHHPP-----HHHRPQ-PHLGSFPES 378
>gi|27894361 nuclear receptor subfamily 4, group A, member 3 isoform
b [Homo sapiens]
Length = 637
Score = 40.0 bits (92), Expect = 0.003
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 196 KTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNA 234
K E +P YHH HHH+H H H ++QQP P A
Sbjct: 96 KVEEGRAPSYHHHHHHHHHHHH---HHQQQHQQPSIPPA 131
Score = 29.6 bits (65), Expect = 4.7
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 241 PGLHHHHKHKGQHRQGHPENRDMPA 265
P HHHH H H H + P+
Sbjct: 103 PSYHHHHHHHHHHHHHHQQQHQQPS 127
Score = 29.3 bits (64), Expect = 6.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 244 HHHHKHKGQHRQGHPENRDMPAS 266
HHHH H H+Q H + PAS
Sbjct: 110 HHHHHHHHHHQQQHQQPSIPPAS 132
>gi|27894359 nuclear receptor subfamily 4, group A, member 3 isoform
c [Homo sapiens]
Length = 443
Score = 40.0 bits (92), Expect = 0.003
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 196 KTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNA 234
K E +P YHH HHH+H H H ++QQP P A
Sbjct: 85 KVEEGRAPSYHHHHHHHHHHHH---HHQQQHQQPSIPPA 120
Score = 29.6 bits (65), Expect = 4.7
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 241 PGLHHHHKHKGQHRQGHPENRDMPA 265
P HHHH H H H + P+
Sbjct: 92 PSYHHHHHHHHHHHHHHQQQHQQPS 116
Score = 29.3 bits (64), Expect = 6.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 244 HHHHKHKGQHRQGHPENRDMPAS 266
HHHH H H+Q H + PAS
Sbjct: 99 HHHHHHHHHHQQQHQQPSIPPAS 121
>gi|27894357 nuclear receptor subfamily 4, group A, member 3 isoform
a [Homo sapiens]
Length = 626
Score = 40.0 bits (92), Expect = 0.003
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 196 KTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNA 234
K E +P YHH HHH+H H H ++QQP P A
Sbjct: 85 KVEEGRAPSYHHHHHHHHHHHH---HHQQQHQQPSIPPA 120
Score = 29.6 bits (65), Expect = 4.7
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 241 PGLHHHHKHKGQHRQGHPENRDMPA 265
P HHHH H H H + P+
Sbjct: 92 PSYHHHHHHHHHHHHHHQQQHQQPS 116
Score = 29.3 bits (64), Expect = 6.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 244 HHHHKHKGQHRQGHPENRDMPAS 266
HHHH H H+Q H + PAS
Sbjct: 99 HHHHHHHHHHQQQHQQPSIPPAS 121
>gi|27894355 nuclear receptor subfamily 4, group A, member 3 isoform
a [Homo sapiens]
Length = 626
Score = 40.0 bits (92), Expect = 0.003
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 196 KTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNA 234
K E +P YHH HHH+H H H ++QQP P A
Sbjct: 85 KVEEGRAPSYHHHHHHHHHHHH---HHQQQHQQPSIPPA 120
Score = 29.6 bits (65), Expect = 4.7
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 241 PGLHHHHKHKGQHRQGHPENRDMPA 265
P HHHH H H H + P+
Sbjct: 92 PSYHHHHHHHHHHHHHHQQQHQQPS 116
Score = 29.3 bits (64), Expect = 6.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 244 HHHHKHKGQHRQGHPENRDMPAS 266
HHHH H H+Q H + PAS
Sbjct: 99 HHHHHHHHHHQQQHQQPSIPPAS 121
>gi|18765752 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1A isoform 2 [Homo sapiens]
Length = 754
Score = 39.7 bits (91), Expect = 0.005
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 206 HHEHHHNHGHQHLGSSELSENQQPGAPNAPTH 237
HH HHH+H H H G L +P N+PT+
Sbjct: 598 HHHHHHHHHHHHHGQQALGNRTRPRVYNSPTN 629
Score = 28.9 bits (63), Expect = 8.0
Identities = 17/61 (27%), Positives = 20/61 (32%), Gaps = 29/61 (47%)
Query: 204 HYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPENRDM 263
H+HH + +H H H HHHH H GQ G NR
Sbjct: 590 HHHHGNSSHHHHHH--------------------------HHHHHHHGQQALG---NRTR 620
Query: 264 P 264
P
Sbjct: 621 P 621
>gi|18765758 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1A isoform 1 [Homo sapiens]
Length = 763
Score = 39.7 bits (91), Expect = 0.005
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 206 HHEHHHNHGHQHLGSSELSENQQPGAPNAPTH 237
HH HHH+H H H G L +P N+PT+
Sbjct: 607 HHHHHHHHHHHHHGQQALGNRTRPRVYNSPTN 638
Score = 28.9 bits (63), Expect = 8.0
Identities = 17/61 (27%), Positives = 20/61 (32%), Gaps = 29/61 (47%)
Query: 204 HYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPENRDM 263
H+HH + +H H H HHHH H GQ G NR
Sbjct: 599 HHHHGNSSHHHHHH--------------------------HHHHHHHGQQALG---NRTR 629
Query: 264 P 264
P
Sbjct: 630 P 630
>gi|32698730 nuclear fragile X mental retardation protein
interacting protein 2 [Homo sapiens]
Length = 695
Score = 39.3 bits (90), Expect = 0.006
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 205 YHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPENR 261
Y+H H+H+H H H + ++ G+P A P L H KH Q Q P+ +
Sbjct: 39 YNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPKP----LKHEQKHTLQQHQETPKKK 91
Score = 38.5 bits (88), Expect = 0.010
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 9/57 (15%)
Query: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGH 257
P P +HH HHH H H QQ P+ H H+H H H+Q H
Sbjct: 8 PQPQHHHSHHHPHHH---------PQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPH 55
>gi|17978466 cyclin T1 [Homo sapiens]
Length = 726
Score = 38.1 bits (87), Expect = 0.013
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAP 232
PS H+HH +HH+H H H + N++PG P
Sbjct: 514 PSNHHHHHNHHSHKHSHSQLPVGTGNKRPGDP 545
>gi|119220564 one cut domain, family member 2 [Homo sapiens]
Length = 504
Score = 37.4 bits (85), Expect = 0.023
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 191 LATVDKTVETPSPHYHHEHHHNHGHQHLGSS 221
++TV P PH+H HHH+H HQ L +
Sbjct: 160 ISTVSDKFHHPHPHHHPHHHHHHHHQRLSGN 190
Score = 29.6 bits (65), Expect = 4.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 204 HYHHEHHHNHGHQHLGSSELSEN 226
H+ H HHH H H H LS N
Sbjct: 168 HHPHPHHHPHHHHHHHHQRLSGN 190
>gi|23308699 transcription factor MAFB [Homo sapiens]
Length = 323
Score = 37.0 bits (84), Expect = 0.030
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 9/47 (19%)
Query: 204 HYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHK 250
H+HH HHH H H + ++ ++ P+A HP HHHH H+
Sbjct: 131 HHHHHHHHPHPHHAYPGAGVAHDEL--GPHA--HP-----HHHHHHQ 168
Score = 31.2 bits (69), Expect = 1.6
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 203 PHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPENR- 261
PH H HHH+H SS S QQ PT PG H G E+R
Sbjct: 157 PHAHPHHHHHHQASPPPSSAASPAQQ-----LPTSHPGPGPHATASATAAGGNGSVEDRF 211
Query: 262 --DMPASEDLQDLQKKL 276
D S +++L + L
Sbjct: 212 SDDQLVSMSVRELNRHL 228
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 37.0 bits (84), Expect = 0.030
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 205 YHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPENRDM- 263
YHH HHH+H H S + GAP P PA P H Q R G P
Sbjct: 323 YHHHHHHHHHHPSPYSPYV------GAPLTPAWPAGP-FETPVLHSLQSRAGAPLPVPRG 375
Query: 264 PASEDLQDLQKKLCRKRCIN 283
P+++ L+DL + + C+N
Sbjct: 376 PSADLLEDLSES---RECVN 392
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 37.0 bits (84), Expect = 0.030
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 19/59 (32%)
Query: 202 SPHYHHEHHHNHGHQHLGSSELSENQQ------------PG-------APNAPTHPAPP 241
S +HH HHH+HGH H G L + Q PG P P+ P PP
Sbjct: 1236 SSTHHHHHHHHHGHSHGGLGVLPDGQSKLQALHAQYCQGPGPAPPPYLPPQQPSLPPPP 1294
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 36.6 bits (83), Expect = 0.039
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 219 GSSELSENQQPGAPNAPTHPAPPG 242
G + EN PGAP AP HP PPG
Sbjct: 1030 GKGDRGENGSPGAPGAPGHPGPPG 1053
>gi|5031761 homeobox A1 isoform a [Homo sapiens]
Length = 335
Score = 36.6 bits (83), Expect = 0.039
Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 36/94 (38%)
Query: 194 VDKTVETPSPHYHHEHHHNH----------------GHQHLGSSELSEN-QQPGAPNAPT 236
V + V+ SPH+HH HHH+H H G S S+N P +P A
Sbjct: 55 VGRGVQIGSPHHHHHHHHHHPQPATYQTSGNLGVSYSHSSCGPSYGSQNFSAPYSPYALN 114
Query: 237 HPA-------------------PPGLHHHHKHKG 251
A P + HHH H+G
Sbjct: 115 QEADVSGGYPQCAPAVYSGNLSSPMVQHHHHHQG 148
>gi|55770830 chromobox homolog 4 [Homo sapiens]
Length = 560
Score = 36.6 bits (83), Expect = 0.039
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 201 PSPHYHHEHHHNHGHQHLGSSELS 224
P PH HH HHH+H H H LS
Sbjct: 384 PHPHPHHHHHHHHHHHHAVGLNLS 407
Score = 28.9 bits (63), Expect = 8.0
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 214 GHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPENRDMPASEDLQ 270
GHQ+ +S+ QP + P PPG + ++ ++ HP D P DLQ
Sbjct: 117 GHQYELNSKKHHQYQPHSKERAGKPPPPGKSGKYYYQLNSKKHHPYQPD-PKMYDLQ 172
>gi|59938776 cAMP responsive element binding protein 5 isoform delta
[Homo sapiens]
Length = 369
Score = 36.2 bits (82), Expect = 0.050
Identities = 15/49 (30%), Positives = 17/49 (34%)
Query: 209 HHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGH 257
HHH H H H + + P P H P HH H H H
Sbjct: 132 HHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSH 180
Score = 36.2 bits (82), Expect = 0.050
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 15/80 (18%)
Query: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPEN 260
P PH+ H H+H H HL + T P PP H G Q P
Sbjct: 164 PQPHHQQNHPHHHSHSHLHAHPAHHQ---------TSPHPP------LHTGNQAQVSPAT 208
Query: 261 RDMPASEDLQDLQKKLCRKR 280
+ M ++ +Q Q R+R
Sbjct: 209 QQMQPTQTIQPPQPTGGRRR 228
Score = 35.4 bits (80), Expect = 0.086
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 199 ETPSPHYH---HEH-----HHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHH--HK 248
+TP H H H+H HH + HQH + Q N P H + LH H H
Sbjct: 129 QTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHH 188
Query: 249 HKGQHRQGHPENRDM--PASEDLQDLQ 273
H H N+ PA++ +Q Q
Sbjct: 189 QTSPHPPLHTGNQAQVSPATQQMQPTQ 215
>gi|59938774 cAMP responsive element binding protein 5 isoform beta
[Homo sapiens]
Length = 501
Score = 36.2 bits (82), Expect = 0.050
Identities = 15/49 (30%), Positives = 17/49 (34%)
Query: 209 HHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGH 257
HHH H H H + + P P H P HH H H H
Sbjct: 264 HHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSH 312
Score = 36.2 bits (82), Expect = 0.050
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 15/80 (18%)
Query: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPEN 260
P PH+ H H+H H HL + T P PP H G Q P
Sbjct: 296 PQPHHQQNHPHHHSHSHLHAHPAHHQ---------TSPHPP------LHTGNQAQVSPAT 340
Query: 261 RDMPASEDLQDLQKKLCRKR 280
+ M ++ +Q Q R+R
Sbjct: 341 QQMQPTQTIQPPQPTGGRRR 360
Score = 35.4 bits (80), Expect = 0.086
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 199 ETPSPHYH---HEH-----HHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHH--HK 248
+TP H H H+H HH + HQH + Q N P H + LH H H
Sbjct: 261 QTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHH 320
Query: 249 HKGQHRQGHPENRDM--PASEDLQDLQ 273
H H N+ PA++ +Q Q
Sbjct: 321 QTSPHPPLHTGNQAQVSPATQQMQPTQ 347
>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
[Homo sapiens]
Length = 475
Score = 36.2 bits (82), Expect = 0.050
Identities = 15/49 (30%), Positives = 17/49 (34%)
Query: 209 HHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGH 257
HHH H H H + + P P H P HH H H H
Sbjct: 238 HHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSH 286
Score = 36.2 bits (82), Expect = 0.050
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 15/80 (18%)
Query: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPEN 260
P PH+ H H+H H HL + T P PP H G Q P
Sbjct: 270 PQPHHQQNHPHHHSHSHLHAHPAHHQ---------TSPHPP------LHTGNQAQVSPAT 314
Query: 261 RDMPASEDLQDLQKKLCRKR 280
+ M ++ +Q Q R+R
Sbjct: 315 QQMQPTQTIQPPQPTGGRRR 334
Score = 35.4 bits (80), Expect = 0.086
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 199 ETPSPHYH---HEH-----HHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHH--HK 248
+TP H H H+H HH + HQH + Q N P H + LH H H
Sbjct: 235 QTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHH 294
Query: 249 HKGQHRQGHPENRDM--PASEDLQDLQ 273
H H N+ PA++ +Q Q
Sbjct: 295 QTSPHPPLHTGNQAQVSPATQQMQPTQ 321
>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
[Homo sapiens]
Length = 508
Score = 36.2 bits (82), Expect = 0.050
Identities = 15/49 (30%), Positives = 17/49 (34%)
Query: 209 HHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGH 257
HHH H H H + + P P H P HH H H H
Sbjct: 271 HHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSH 319
Score = 36.2 bits (82), Expect = 0.050
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 15/80 (18%)
Query: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPEN 260
P PH+ H H+H H HL + T P PP H G Q P
Sbjct: 303 PQPHHQQNHPHHHSHSHLHAHPAHHQ---------TSPHPP------LHTGNQAQVSPAT 347
Query: 261 RDMPASEDLQDLQKKLCRKR 280
+ M ++ +Q Q R+R
Sbjct: 348 QQMQPTQTIQPPQPTGGRRR 367
Score = 35.4 bits (80), Expect = 0.086
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 199 ETPSPHYH---HEH-----HHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHH--HK 248
+TP H H H+H HH + HQH + Q N P H + LH H H
Sbjct: 268 QTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHH 327
Query: 249 HKGQHRQGHPENRDM--PASEDLQDLQ 273
H H N+ PA++ +Q Q
Sbjct: 328 QTSPHPPLHTGNQAQVSPATQQMQPTQ 354
>gi|4504489 histidine-rich glycoprotein precursor [Homo sapiens]
Length = 525
Score = 36.2 bits (82), Expect = 0.050
Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 12/73 (16%)
Query: 201 PSPHYHHEH--HHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHP 258
P H+ HE H +H H H + Q P HP H HH H G H GH
Sbjct: 351 PHKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHG----HHP-----HGHHPH-GHHPHGHH 400
Query: 259 ENRDMPASEDLQD 271
+ P D QD
Sbjct: 401 PHGHHPHCHDFQD 413
Score = 32.3 bits (72), Expect = 0.73
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 203 PHYHHEH-HHNHGHQ-HLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPEN 260
PH HH H HH HGH H + Q G + P H H H G R+ P
Sbjct: 386 PHGHHPHGHHPHGHHPHGHHPHCHDFQDYGPCDPPPHNQGHCCHGHGPPPGHLRRRGPGK 445
Query: 261 RDMP 264
P
Sbjct: 446 GPRP 449
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,250,626
Number of Sequences: 37866
Number of extensions: 797344
Number of successful extensions: 5962
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 4071
Number of HSP's gapped (non-prelim): 970
length of query: 381
length of database: 18,247,518
effective HSP length: 104
effective length of query: 277
effective length of database: 14,309,454
effective search space: 3963718758
effective search space used: 3963718758
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.