Search of human proteins with 61966713

Search of human proteins with 61966713

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|61966713 DDB1 and CUL4 associated factor 12-like 2 [Homo
sapiens]
         (463 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|61966713 DDB1 and CUL4 associated factor 12-like 2 [Homo sapi...   953   0.0  
gi|71284432 WD repeat domain 40B [Homo sapiens]                       829   0.0  
gi|22218619 WD repeat domain 40A [Homo sapiens]                       590   e-169
gi|19913367 transducin beta-like 1Y [Homo sapiens]                     42   0.002
gi|19913365 transducin beta-like 1Y [Homo sapiens]                     42   0.002
gi|15150805 transducin beta-like 1Y [Homo sapiens]                     42   0.002
gi|21071067 TBP-associated factor 5 [Homo sapiens]                     40   0.004
gi|213021190 transducin beta-like 1X isoform b [Homo sapiens]          40   0.004
gi|213021188 transducin beta-like 1X isoform b [Homo sapiens]          40   0.004
gi|213021186 transducin beta-like 1X isoform a [Homo sapiens]          40   0.004
gi|5032159 transducin beta-like 1X isoform a [Homo sapiens]            40   0.004
gi|21536371 telomerase-associated protein 1 [Homo sapiens]             40   0.006
gi|55743149 WD repeat domain 17 isoform 2 [Homo sapiens]               40   0.006
gi|31317311 WD repeat domain 17 isoform 1 [Homo sapiens]               40   0.006
gi|19913371 transducin (beta)-like 1 X-linked receptor 1 [Homo s...    40   0.006
gi|118402582 cell division cycle 20 [Homo sapiens]                     38   0.022
gi|20357529 guanine nucleotide-binding protein, beta-2 subunit [...    37   0.029
gi|4505895 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...    37   0.029
gi|17402902 guanine nucleotide binding protein beta-subunit-like...    37   0.038
gi|19913369 transducin beta-like 3 [Homo sapiens]                      37   0.049
gi|11055998 guanine nucleotide-binding protein, beta-4 subunit [...    36   0.065
gi|32189425 WD repeat domain 69 [Homo sapiens]                         36   0.084
gi|11321585 guanine nucleotide-binding protein, beta-1 subunit [...    35   0.11 
gi|38569484 kinesin family member 21A [Homo sapiens]                   35   0.14 
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo...    33   0.42 
gi|66932902 SREBF chaperone protein [Homo sapiens]                     33   0.55 
gi|4759276 RNA, U3 small nucleolar interacting protein 2 [Homo s...    33   0.71 
gi|48928050 F-box and WD repeat domain containing 11 isoform C [...    33   0.71 
gi|48928048 F-box and WD repeat domain containing 11 isoform A [...    33   0.71 
gi|48928046 F-box and WD repeat domain containing 11 isoform B [...    33   0.71 

>gi|61966713 DDB1 and CUL4 associated factor 12-like 2 [Homo
           sapiens]
          Length = 463

 Score =  953 bits (2464), Expect = 0.0
 Identities = 463/463 (100%), Positives = 463/463 (100%)

Query: 1   MAQQQTGSRKRKAPAVEAGAGSSSSQGLAAADGEGPLLPKKQKRPATRRRLVHYLKGREV 60
           MAQQQTGSRKRKAPAVEAGAGSSSSQGLAAADGEGPLLPKKQKRPATRRRLVHYLKGREV
Sbjct: 1   MAQQQTGSRKRKAPAVEAGAGSSSSQGLAAADGEGPLLPKKQKRPATRRRLVHYLKGREV 60

Query: 61  GARGPAGLQGFEGELRGYAVQRLPELLTERQLDLGTLNKVFASQWLNARQVVCGTKCNTL 120
           GARGPAGLQGFEGELRGYAVQRLPELLTERQLDLGTLNKVFASQWLNARQVVCGTKCNTL
Sbjct: 61  GARGPAGLQGFEGELRGYAVQRLPELLTERQLDLGTLNKVFASQWLNARQVVCGTKCNTL 120

Query: 121 FVVDVQSGHITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLP 180
           FVVDVQSGHITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLP
Sbjct: 121 FVVDVQSGHITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLP 180

Query: 181 TLDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLP 240
           TLDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLP
Sbjct: 181 TLDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLP 240

Query: 241 VYAHIRPRDVEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLLS 300
           VYAHIRPRDVEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLLS
Sbjct: 241 VYAHIRPRDVEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLLS 300

Query: 301 IRLPYCRENVCLTYCDELSLYAVGSQSHVSFLDPRQRQQNIRPLCSREGGTGVRSLSFYQ 360
           IRLPYCRENVCLTYCDELSLYAVGSQSHVSFLDPRQRQQNIRPLCSREGGTGVRSLSFYQ
Sbjct: 301 IRLPYCRENVCLTYCDELSLYAVGSQSHVSFLDPRQRQQNIRPLCSREGGTGVRSLSFYQ 360

Query: 361 HIITVGTGHGSLLFYDIRAQKFLEERASSSLDSMPGPAGRKLKLACGRGWLNQDDVWVNY 420
           HIITVGTGHGSLLFYDIRAQKFLEERASSSLDSMPGPAGRKLKLACGRGWLNQDDVWVNY
Sbjct: 361 HIITVGTGHGSLLFYDIRAQKFLEERASSSLDSMPGPAGRKLKLACGRGWLNQDDVWVNY 420

Query: 421 FGGMGEFPNALYTHCYNWPEMKLFVAGGPLPSGLHGNYAGLWS 463
           FGGMGEFPNALYTHCYNWPEMKLFVAGGPLPSGLHGNYAGLWS
Sbjct: 421 FGGMGEFPNALYTHCYNWPEMKLFVAGGPLPSGLHGNYAGLWS 463


>gi|71284432 WD repeat domain 40B [Homo sapiens]
          Length = 463

 Score =  829 bits (2142), Expect = 0.0
 Identities = 402/463 (86%), Positives = 427/463 (92%)

Query: 1   MAQQQTGSRKRKAPAVEAGAGSSSSQGLAAADGEGPLLPKKQKRPATRRRLVHYLKGREV 60
           MAQQQTGSRKRKAPAVEA A SS SQGLAAADGEGPLL K+Q+RPAT R + HYLK REV
Sbjct: 1   MAQQQTGSRKRKAPAVEADAESSPSQGLAAADGEGPLLLKRQRRPATYRSMAHYLKVREV 60

Query: 61  GARGPAGLQGFEGELRGYAVQRLPELLTERQLDLGTLNKVFASQWLNARQVVCGTKCNTL 120
           G  GPA LQGF+GELRGYAVQRLPELLTERQL+LGT+NKVFASQWLN+RQVVCGTKCNTL
Sbjct: 61  GGWGPARLQGFDGELRGYAVQRLPELLTERQLELGTVNKVFASQWLNSRQVVCGTKCNTL 120

Query: 121 FVVDVQSGHITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLP 180
           FVVDV+SGHI RIPL+RD EA LAQ  QGCGIHAIELNPSKTLLATGGENPNSLAIYQLP
Sbjct: 121 FVVDVESGHIARIPLLRDSEARLAQDQQGCGIHAIELNPSKTLLATGGENPNSLAIYQLP 180

Query: 181 TLDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLP 240
           +LDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVALWRMDPD F+ ++AWHSEVGLP
Sbjct: 181 SLDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVALWRMDPDKFDDTVAWHSEVGLP 240

Query: 241 VYAHIRPRDVEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLLS 300
           VYAHIRPRDVEAIPRA  NPSNRKVRALA  GKNQELGAVSLDGYFHLWKA S LSRLLS
Sbjct: 241 VYAHIRPRDVEAIPRAIINPSNRKVRALACGGKNQELGAVSLDGYFHLWKAGSALSRLLS 300

Query: 301 IRLPYCRENVCLTYCDELSLYAVGSQSHVSFLDPRQRQQNIRPLCSREGGTGVRSLSFYQ 360
           IRLPY R+NVCLTYCD++S+YAVGS SHVSFLD RQ QQNIRPLCSREGGTGVRSLSFY+
Sbjct: 301 IRLPYFRDNVCLTYCDDMSVYAVGSHSHVSFLDLRQDQQNIRPLCSREGGTGVRSLSFYR 360

Query: 361 HIITVGTGHGSLLFYDIRAQKFLEERASSSLDSMPGPAGRKLKLACGRGWLNQDDVWVNY 420
           HIITVGTG GSLLFYD+RAQKFLEERAS++L+S  GPA RKL+LACGRGWLN +D WVNY
Sbjct: 361 HIITVGTGQGSLLFYDVRAQKFLEERASATLESSSGPARRKLRLACGRGWLNHNDFWVNY 420

Query: 421 FGGMGEFPNALYTHCYNWPEMKLFVAGGPLPSGLHGNYAGLWS 463
           FGGM  FPNALYTHCYNWPEMKLFVAGGPLP+GLHGNYAGLWS
Sbjct: 421 FGGMEVFPNALYTHCYNWPEMKLFVAGGPLPAGLHGNYAGLWS 463


>gi|22218619 WD repeat domain 40A [Homo sapiens]
          Length = 453

 Score =  590 bits (1521), Expect = e-169
 Identities = 296/462 (64%), Positives = 352/462 (76%), Gaps = 21/462 (4%)

Query: 8   SRKRKAPAVEAGAGSSSSQGLAAADGEGPL------LPKKQKRPATRRRLVHYLKGREVG 61
           SRKRKAPA   GAGS         D +GP       L K+++ P  +R LV+YLK REV 
Sbjct: 7   SRKRKAPA-SPGAGS---------DAQGPQFGWDHSLHKRKRLPPVKRSLVYYLKNREVR 56

Query: 62  ARGPAGLQGFEGELRGYAVQRLPELLTERQLDLGTLNKVFASQWLNARQVVCGTKCNTLF 121
            +       +   L GYA Q+LP LL ER+  LGTLNKVFASQWLN RQVVCGTKCNTLF
Sbjct: 57  LQNETS---YSRVLHGYAAQQLPSLLKEREFHLGTLNKVFASQWLNHRQVVCGTKCNTLF 113

Query: 122 VVDVQSGHITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPT 181
           VVDVQ+  IT+IP+++D+E G     QGCGIHAIELNPS+TLLATGG+NPNSLAIY+LPT
Sbjct: 114 VVDVQTSQITKIPILKDREPG-GVTQQGCGIHAIELNPSRTLLATGGDNPNSLAIYRLPT 172

Query: 182 LDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPV 241
           LDP+C+GD  GHKDWIF++AW+SDT+AVSGSRDG++ LW +  D+   S A H+   +PV
Sbjct: 173 LDPVCVGD-DGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTDDVLTKSDARHNVSRVPV 231

Query: 242 YAHIRPRDVEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLLSI 301
           YAHI  + ++ IP+  TNP N KVRALAF+ KN+ELGAVSLDGYFHLWKA +TLS+LLS 
Sbjct: 232 YAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFHLWKAENTLSKLLST 291

Query: 302 RLPYCRENVCLTYCDELSLYAVGSQSHVSFLDPRQRQQNIRPLCSREGGTGVRSLSFYQH 361
           +LPYCRENVCL Y  E S+YAVGSQ+HVSFLDPRQ   N++ +CSRE G+G+RS+SFY+H
Sbjct: 292 KLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSRERGSGIRSVSFYEH 351

Query: 362 IITVGTGHGSLLFYDIRAQKFLEERASSSLDSMPGPAGRKLKLACGRGWLNQDDVWVNYF 421
           IITVGTG GSLLFYDIRAQ+FLEER S+   S P  AG  LKL  G+GWLN D+ W NYF
Sbjct: 352 IITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTGKGWLNHDETWRNYF 411

Query: 422 GGMGEFPNALYTHCYNWPEMKLFVAGGPLPSGLHGNYAGLWS 463
             +  FPNA+YTHCY+    KLFVAGGPLPSGLHGNYAGLWS
Sbjct: 412 SDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS 453


>gi|19913367 transducin beta-like 1Y [Homo sapiens]
          Length = 522

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 40/152 (26%)

Query: 152 IHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWL-------- 203
           ++AI+ +PS  LLA+  ++  +L I+ +      C+ D   H   I+ + W         
Sbjct: 362 VNAIKWDPSGMLLASCSDDM-TLKIWSMK--QDACVHDLQAHSKEIYTIKWSPTGPATSN 418

Query: 204 --SDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRDVEAIPRASTNPS 261
             S  +  S S D TV LW ++  +   ++  H E   PVY+                  
Sbjct: 419 PNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQE---PVYS------------------ 457

Query: 262 NRKVRALAFSGKNQELGAVSLDGYFHLWKARS 293
                 +AFS   + L + S D Y H+W  +S
Sbjct: 458 ------VAFSPDGKYLASGSFDKYVHIWNTQS 483



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 16/110 (14%)

Query: 192 GHKDWIFAVAW--LSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRD 249
           GH+  +F  AW  +SD +A SGS D T  +W ++ +   GS    +++ L         D
Sbjct: 177 GHESEVFICAWNPVSDLLA-SGSGDSTARIWNLNENSNGGS----TQLVLRHCIREGGHD 231

Query: 250 VEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLL 299
           V         PSN+ V +L ++     L   S DG+  +W     L+  L
Sbjct: 232 V---------PSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTL 272


>gi|19913365 transducin beta-like 1Y [Homo sapiens]
          Length = 522

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 40/152 (26%)

Query: 152 IHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWL-------- 203
           ++AI+ +PS  LLA+  ++  +L I+ +      C+ D   H   I+ + W         
Sbjct: 362 VNAIKWDPSGMLLASCSDDM-TLKIWSMK--QDACVHDLQAHSKEIYTIKWSPTGPATSN 418

Query: 204 --SDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRDVEAIPRASTNPS 261
             S  +  S S D TV LW ++  +   ++  H E   PVY+                  
Sbjct: 419 PNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQE---PVYS------------------ 457

Query: 262 NRKVRALAFSGKNQELGAVSLDGYFHLWKARS 293
                 +AFS   + L + S D Y H+W  +S
Sbjct: 458 ------VAFSPDGKYLASGSFDKYVHIWNTQS 483



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 16/110 (14%)

Query: 192 GHKDWIFAVAW--LSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRD 249
           GH+  +F  AW  +SD +A SGS D T  +W ++ +   GS    +++ L         D
Sbjct: 177 GHESEVFICAWNPVSDLLA-SGSGDSTARIWNLNENSNGGS----TQLVLRHCIREGGHD 231

Query: 250 VEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLL 299
           V         PSN+ V +L ++     L   S DG+  +W     L+  L
Sbjct: 232 V---------PSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTL 272


>gi|15150805 transducin beta-like 1Y [Homo sapiens]
          Length = 522

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 40/152 (26%)

Query: 152 IHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWL-------- 203
           ++AI+ +PS  LLA+  ++  +L I+ +      C+ D   H   I+ + W         
Sbjct: 362 VNAIKWDPSGMLLASCSDDM-TLKIWSMK--QDACVHDLQAHSKEIYTIKWSPTGPATSN 418

Query: 204 --SDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRDVEAIPRASTNPS 261
             S  +  S S D TV LW ++  +   ++  H E   PVY+                  
Sbjct: 419 PNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQE---PVYS------------------ 457

Query: 262 NRKVRALAFSGKNQELGAVSLDGYFHLWKARS 293
                 +AFS   + L + S D Y H+W  +S
Sbjct: 458 ------VAFSPDGKYLASGSFDKYVHIWNTQS 483



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 16/110 (14%)

Query: 192 GHKDWIFAVAW--LSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRD 249
           GH+  +F  AW  +SD +A SGS D T  +W ++ +   GS    +++ L         D
Sbjct: 177 GHESEVFICAWNPVSDLLA-SGSGDSTARIWNLNENSNGGS----TQLVLRHCIREGGHD 231

Query: 250 VEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLL 299
           V         PSN+ V +L ++     L   S DG+  +W     L+  L
Sbjct: 232 V---------PSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTL 272


>gi|21071067 TBP-associated factor 5 [Homo sapiens]
          Length = 800

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 15/115 (13%)

Query: 107 NARQVVCGTKCNTLFVVDVQSGHITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLAT 166
           N+  V  G+   T+ + DV +G+  RI             H+G  IH++  +P+   LAT
Sbjct: 638 NSNYVATGSADRTVRLWDVLNGNCVRI----------FTGHKG-PIHSLTFSPNGRFLAT 686

Query: 167 GGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWLSD-TVAVSGSRDGTVALW 220
           G  +   L ++ +     L +G+  GH D + ++ +  D  +  SGS D TV LW
Sbjct: 687 GATDGRVL-LWDIG--HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738


>gi|213021190 transducin beta-like 1X isoform b [Homo sapiens]
          Length = 526

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 43/175 (24%)

Query: 129 HITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLG 188
           H+ R+    D+     Q H    ++AI+ +PS  LLA+  ++  +L I+ +     +C+ 
Sbjct: 344 HVCRLGC--DRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDM-TLKIWSMK--QEVCIH 397

Query: 189 DRHGHKDWIFAVAWL----------SDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVG 238
           D   H   I+ + W           S+ +  S S D TV LW ++  +   ++  H E  
Sbjct: 398 DLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQE-- 455

Query: 239 LPVYAHIRPRDVEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARS 293
            PVY+                        +AFS   + L + S D   H+W  +S
Sbjct: 456 -PVYS------------------------VAFSPDGKYLASGSFDKCVHIWNTQS 485



 Score = 37.7 bits (86), Expect = 0.022
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 16/110 (14%)

Query: 192 GHKDWIFAVAW--LSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRD 249
           GH+  +F  AW  +SD +A SGS D T  +W ++ +   GS    +++ L         D
Sbjct: 179 GHESEVFICAWNPVSDLLA-SGSGDSTARIWNLNENSNGGS----TQLVLRHCIREGGHD 233

Query: 250 VEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLL 299
           V         PSN+ V +L ++     L   S DG+  +W     L+  L
Sbjct: 234 V---------PSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTL 274


>gi|213021188 transducin beta-like 1X isoform b [Homo sapiens]
          Length = 526

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 43/175 (24%)

Query: 129 HITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLG 188
           H+ R+    D+     Q H    ++AI+ +PS  LLA+  ++  +L I+ +     +C+ 
Sbjct: 344 HVCRLGC--DRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDM-TLKIWSMK--QEVCIH 397

Query: 189 DRHGHKDWIFAVAWL----------SDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVG 238
           D   H   I+ + W           S+ +  S S D TV LW ++  +   ++  H E  
Sbjct: 398 DLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQE-- 455

Query: 239 LPVYAHIRPRDVEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARS 293
            PVY+                        +AFS   + L + S D   H+W  +S
Sbjct: 456 -PVYS------------------------VAFSPDGKYLASGSFDKCVHIWNTQS 485



 Score = 37.7 bits (86), Expect = 0.022
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 16/110 (14%)

Query: 192 GHKDWIFAVAW--LSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRD 249
           GH+  +F  AW  +SD +A SGS D T  +W ++ +   GS    +++ L         D
Sbjct: 179 GHESEVFICAWNPVSDLLA-SGSGDSTARIWNLNENSNGGS----TQLVLRHCIREGGHD 233

Query: 250 VEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLL 299
           V         PSN+ V +L ++     L   S DG+  +W     L+  L
Sbjct: 234 V---------PSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTL 274


>gi|213021186 transducin beta-like 1X isoform a [Homo sapiens]
          Length = 577

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 43/175 (24%)

Query: 129 HITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLG 188
           H+ R+    D+     Q H    ++AI+ +PS  LLA+  ++  +L I+ +     +C+ 
Sbjct: 395 HVCRLGC--DRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDM-TLKIWSMK--QEVCIH 448

Query: 189 DRHGHKDWIFAVAWL----------SDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVG 238
           D   H   I+ + W           S+ +  S S D TV LW ++  +   ++  H E  
Sbjct: 449 DLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQE-- 506

Query: 239 LPVYAHIRPRDVEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARS 293
            PVY+                        +AFS   + L + S D   H+W  +S
Sbjct: 507 -PVYS------------------------VAFSPDGKYLASGSFDKCVHIWNTQS 536



 Score = 37.7 bits (86), Expect = 0.022
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 16/110 (14%)

Query: 192 GHKDWIFAVAW--LSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRD 249
           GH+  +F  AW  +SD +A SGS D T  +W ++ +   GS    +++ L         D
Sbjct: 230 GHESEVFICAWNPVSDLLA-SGSGDSTARIWNLNENSNGGS----TQLVLRHCIREGGHD 284

Query: 250 VEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLL 299
           V         PSN+ V +L ++     L   S DG+  +W     L+  L
Sbjct: 285 V---------PSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTL 325


>gi|5032159 transducin beta-like 1X isoform a [Homo sapiens]
          Length = 577

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 43/175 (24%)

Query: 129 HITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLG 188
           H+ R+    D+     Q H    ++AI+ +PS  LLA+  ++  +L I+ +     +C+ 
Sbjct: 395 HVCRLGC--DRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDM-TLKIWSMK--QEVCIH 448

Query: 189 DRHGHKDWIFAVAWL----------SDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVG 238
           D   H   I+ + W           S+ +  S S D TV LW ++  +   ++  H E  
Sbjct: 449 DLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQE-- 506

Query: 239 LPVYAHIRPRDVEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARS 293
            PVY+                        +AFS   + L + S D   H+W  +S
Sbjct: 507 -PVYS------------------------VAFSPDGKYLASGSFDKCVHIWNTQS 536



 Score = 37.7 bits (86), Expect = 0.022
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 16/110 (14%)

Query: 192 GHKDWIFAVAW--LSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRD 249
           GH+  +F  AW  +SD +A SGS D T  +W ++ +   GS    +++ L         D
Sbjct: 230 GHESEVFICAWNPVSDLLA-SGSGDSTARIWNLNENSNGGS----TQLVLRHCIREGGHD 284

Query: 250 VEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLL 299
           V         PSN+ V +L ++     L   S DG+  +W     L+  L
Sbjct: 285 V---------PSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTL 325


>gi|21536371 telomerase-associated protein 1 [Homo sapiens]
          Length = 2627

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 164  LATGGENPNSLAI-YQLPTLDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVALWRM 222
            LATGG + + L    + P    L       H+DW+   AW  D + +S S DG+V LW  
Sbjct: 2076 LATGGRDRSLLCWDVRTPKTPVLIHSFPACHRDWVTGCAWTKDNLLISCSSDGSVGLW-- 2133

Query: 223  DPD 225
            DP+
Sbjct: 2134 DPE 2136



 Score = 30.8 bits (68), Expect = 2.7
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 18/116 (15%)

Query: 114  GTKCNTLFVVDVQSGHITRI--PLMRDKEAGLAQAHQGCG----IHAIELNPSKTLLATG 167
            G   + L VV V     TR+  PL+      + Q H   G    + A  ++ +  L+ T 
Sbjct: 2203 GQPGSELLVVTVGLDGATRLWHPLL------VCQTHTLLGHSGPVRAAAVSETSGLMLTA 2256

Query: 168  GENPNSLAIYQLPT-LDPLCLGDRHGHKDWIFAVAWLSD-TVAVSGSRDGTVALWR 221
             E+  S+ ++Q+P   D  C+         + AVAW  D ++AVSG++ G + LW+
Sbjct: 2257 SED-GSVRLWQVPKEADDTCIPRSSAA---VTAVAWAPDGSMAVSGNQAGELILWQ 2308



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 197  IFAVAWLSDTVAVSGSRDGTVALWRM 222
            + A+AWLS  V VSG+ DG++  W +
Sbjct: 1972 VSALAWLSPKVLVSGAEDGSLQGWAL 1997


>gi|55743149 WD repeat domain 17 isoform 2 [Homo sapiens]
          Length = 1298

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 13/90 (14%)

Query: 160 SKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAW--LSDTVAVSGSRDGTV 217
           +K ++ATG E+ N + +Y + T     L    GH   +F V W  L + +  SGS DGTV
Sbjct: 509 NKDMIATGCEDTN-VRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGILCSGSDDGTV 567

Query: 218 ALWRMDPD----MFNGSIA------WHSEV 237
            +W    D    + NG  A      W++E+
Sbjct: 568 RIWDYTQDACINILNGHTAPVRGLMWNTEI 597


>gi|31317311 WD repeat domain 17 isoform 1 [Homo sapiens]
          Length = 1322

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 13/90 (14%)

Query: 160 SKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAW--LSDTVAVSGSRDGTV 217
           +K ++ATG E+ N + +Y + T     L    GH   +F V W  L + +  SGS DGTV
Sbjct: 533 NKDMIATGCEDTN-VRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGILCSGSDDGTV 591

Query: 218 ALWRMDPD----MFNGSIA------WHSEV 237
            +W    D    + NG  A      W++E+
Sbjct: 592 RIWDYTQDACINILNGHTAPVRGLMWNTEI 621


>gi|19913371 transducin (beta)-like 1 X-linked receptor 1 [Homo
           sapiens]
          Length = 514

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 16/110 (14%)

Query: 192 GHKDWIFAVAW--LSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRD 249
           GH+  +F  AW  +SD +A SGS D T  +W +  +  +GS    +++ L        +D
Sbjct: 167 GHESEVFICAWNPVSDLLA-SGSGDSTARIWNLSENSTSGS----TQLVLRHCIREGGQD 221

Query: 250 VEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLL 299
           V         PSN+ V +L ++ +   L   S DG+  +W     L+  L
Sbjct: 222 V---------PSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTL 262



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 41/169 (24%)

Query: 135 LMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHK 194
           L +D+     Q H    ++AI+ +P+  LLA+  ++  +L I+ +   +  C+ D   H 
Sbjct: 336 LGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDM-TLKIWSMKQDN--CVHDLQAHN 391

Query: 195 DWIFAVAWL----------SDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAH 244
             I+ + W           ++ +  S S D TV LW +D  +   ++  H E   PVY  
Sbjct: 392 KEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQE---PVY-- 446

Query: 245 IRPRDVEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARS 293
                                 ++AFS   + L + S D   H+W  ++
Sbjct: 447 ----------------------SVAFSPDGRYLASGSFDKCVHIWNTQT 473


>gi|118402582 cell division cycle 20 [Homo sapiens]
          Length = 499

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 13/161 (8%)

Query: 279 AVSLDGYFHLWKARS-TLSRLLSIRLPYCRENVC-LTYCDELSLYAVGSQSHVSFLDPRQ 336
           AV+LD   +LW A S  + +LL +  P   E +  + +  E +  AVG+ S    L   Q
Sbjct: 199 AVALDNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ 256

Query: 337 RQQNIRPLCSREGGTGVRSLSFYQHIITVGTGHGSLLFYDIRAQKFLEERASSSLDSMPG 396
           +Q+ +R + S     G  SLS+  +I++ G+  G +  +D+R  +      S     + G
Sbjct: 257 QQKRLRNMTSHSARVG--SLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG 314

Query: 397 ----PAGRKLKLACGRGWLNQDDVWVNYFGGMGEFPNALYT 433
               P GR L      G  N  +VW +  G  G  P   +T
Sbjct: 315 LRWAPDGRHL---ASGGNDNLVNVWPSAPGEGGWVPLQTFT 352


>gi|20357529 guanine nucleotide-binding protein, beta-2 subunit
           [Homo sapiens]
          Length = 340

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 18/155 (11%)

Query: 85  ELLTERQLDLGTLNKVFASQW-LNARQVVCGTKCNTLFVVD-VQSGHITRIPLMRDKEAG 142
           ++ T R L  G L K++A  W  ++R +V  ++   L + D   +  +  IPL       
Sbjct: 44  QMRTRRTLR-GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMT 102

Query: 143 LAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRH--GHKDWIFAV 200
            A A            PS   +A GG + N  +IY L T +      R   GH  ++   
Sbjct: 103 CAYA------------PSGNFVACGGLD-NICSIYSLKTREGNVRVSRELPGHTGYLSCC 149

Query: 201 AWLSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHS 235
            +L D   ++ S D T ALW ++        A HS
Sbjct: 150 RFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHS 184


>gi|4505895 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis)
           [Homo sapiens]
          Length = 514

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 15/111 (13%)

Query: 110 QVVCGTKCNTLFVVDVQSGHITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGE 169
           Q++ G+   T+ + D+ +G  TR+ L   K++          + A+ L+P     A+G  
Sbjct: 344 QIITGSHDTTIRLWDLVAGK-TRVTLTNHKKS----------VRAVVLHPRHYTFASG-- 390

Query: 170 NPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVALW 220
           +P+++  ++ P  D   + +  GH   I  +   SD V VSG+ +GT+ LW
Sbjct: 391 SPDNIKQWKFP--DGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLW 439


>gi|17402902 guanine nucleotide binding protein beta-subunit-like
           polypeptide [Homo sapiens]
          Length = 327

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 151 GIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWLSDTVAVS 210
           GI  + + P + +LAT G + + + ++   T+ PL +   H     +  VA+ +D +  +
Sbjct: 255 GIAEVTIRPDRKILATAGWD-HRIRVFHWRTMQPLAVLAFHSAA--VQCVAFTADGLLAA 311

Query: 211 GSRDGTVALWRMDP 224
           GS+D  ++LW + P
Sbjct: 312 GSKDQRISLWSLYP 325


>gi|19913369 transducin beta-like 3 [Homo sapiens]
          Length = 808

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 144 AQAHQGC---GIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAV 200
           AQ  Q C    I+++ + P+  LLATG ++  +  ++ LP      LG   GH+  ++ V
Sbjct: 471 AQTTQRCHDKDINSVAIAPNDKLLATGSQD-RTAKLWALPQCQ--LLGVFSGHRRGLWCV 527

Query: 201 AWLS-DTVAVSGSRDGTVALWRM 222
            +   D V  + S DGT+ LW +
Sbjct: 528 QFSPMDQVLATASADGTIKLWAL 550


>gi|11055998 guanine nucleotide-binding protein, beta-4 subunit
           [Homo sapiens]
          Length = 340

 Score = 36.2 bits (82), Expect = 0.065
 Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 34/243 (13%)

Query: 85  ELLTERQLDLGTLNKVFASQW-LNARQVVCGTKCNTLFVVD-VQSGHITRIPLMRDKEAG 142
           ++ T R L  G L K++A  W  ++R +V  ++   L + D   +  +  IPL       
Sbjct: 44  QMRTRRTLR-GHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMT 102

Query: 143 LAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRH--GHKDWIFAV 200
            A A            PS   +A GG + N  +IY L T +      R   GH  ++   
Sbjct: 103 CAYA------------PSGNYVACGGLD-NICSIYNLKTREGNVRVSRELPGHTGYLSCC 149

Query: 201 AWLSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRDVEAIPRASTNP 260
            +L D+  V+ S D T ALW ++      +   HS  G  +   + P D+      + + 
Sbjct: 150 RFLDDSQIVTSSGDTTCALWDIETAQQTTTFTGHS--GDVMSLSLSP-DMRTFVSGACDA 206

Query: 261 SNR------KVRALAFSGKNQELGAVSL--DGYFHLWKARSTLSRLLSIR-----LPYCR 307
           S++       +   +F+G   ++ AVS   +GY     +     RL  +R     L Y  
Sbjct: 207 SSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYSH 266

Query: 308 ENV 310
           +N+
Sbjct: 267 DNI 269


>gi|32189425 WD repeat domain 69 [Homo sapiens]
          Length = 415

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)

Query: 145 QAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAW-L 203
           + H+G  I  I  NP    L TG  +  +  I+   T    CL    GH D IF+ A+  
Sbjct: 342 EGHEG-EISKISFNPQGNHLLTGSSDKTA-RIWDAQTGQ--CLQVLEGHTDEIFSCAFNY 397

Query: 204 SDTVAVSGSRDGTVALWR 221
              + ++GS+D T  +WR
Sbjct: 398 KGNIVITGSKDNTCRIWR 415


>gi|11321585 guanine nucleotide-binding protein, beta-1 subunit
           [Homo sapiens]
          Length = 340

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 18/155 (11%)

Query: 85  ELLTERQLDLGTLNKVFASQW-LNARQVVCGTKCNTLFVVD-VQSGHITRIPLMRDKEAG 142
           ++ T R L  G L K++A  W  ++R +V  ++   L + D   +  +  IPL       
Sbjct: 44  QMRTRRTLR-GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMT 102

Query: 143 LAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRH--GHKDWIFAV 200
            A A            PS   +A GG + N  +IY L T +      R   GH  ++   
Sbjct: 103 CAYA------------PSGNYVACGGLD-NICSIYNLKTREGNVRVSRELAGHTGYLSCC 149

Query: 201 AWLSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHS 235
            +L D   V+ S D T ALW ++      +   H+
Sbjct: 150 RFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 184


>gi|38569484 kinesin family member 21A [Homo sapiens]
          Length = 1661

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 10/125 (8%)

Query: 111  VVCGTKCNTLFVVDVQSGHITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGEN 170
            ++ G+K + + + DV  G +  +    + E      H   GI A+ +          G  
Sbjct: 1497 IITGSKDHYIKMFDVTEGALGTVSPTHNFEP----PHYD-GIEALTIQGDNLF---SGSR 1548

Query: 171  PNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWLSD-TVAVSGSRDGTVALWRMDPDMFNG 229
             N +  + L   D L     + HKDW+ A+  + D  V +SG R G + +W MD  M  G
Sbjct: 1549 DNGIKKWDLTQKD-LLQQVPNAHKDWVCALGVVPDHPVLLSGCRGGILKVWNMDTFMPVG 1607

Query: 230  SIAWH 234
             +  H
Sbjct: 1608 EMKGH 1612


>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
           sapiens]
          Length = 1802

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 163 LLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWLSDTVA---VSGSRDGTVAL 219
           +  T G   + + IY L +  P  + +   H D + AV + ++  +   VSGSRDGT  +
Sbjct: 331 MFITTGSTDHVIRIYYLGSEVPEKIAELESHTDKVVAVQFCNNGDSLRFVSGSRDGTARI 390

Query: 220 WR 221
           W+
Sbjct: 391 WQ 392


>gi|66932902 SREBF chaperone protein [Homo sapiens]
          Length = 1279

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 13/81 (16%)

Query: 164  LATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVALWRMD 223
            L TG ++ ++L +++L   D  CL    GH   I  V      V  SG +DG + LW   
Sbjct: 1092 LVTGSQD-HTLRVFRLE--DSCCLFTLQGHSGAITTVYIDQTMVLASGGQDGAICLW--- 1145

Query: 224  PDMFNGSIAWHSEVGLPVYAH 244
             D+  GS   H      V+AH
Sbjct: 1146 -DVLTGSRVSH------VFAH 1159


>gi|4759276 RNA, U3 small nucleolar interacting protein 2 [Homo
           sapiens]
          Length = 475

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 160 SKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVAL 219
           S+    T G    ++ ++++P    L     +GH+  I  +  +++   VSG+ DG+VAL
Sbjct: 293 SRECCVTAGGRDGTVRVWKIPEESQLVF---YGHQGSIDCIHLINEEHMVSGADDGSVAL 349

Query: 220 W 220
           W
Sbjct: 350 W 350


>gi|48928050 F-box and WD repeat domain containing 11 isoform C
           [Homo sapiens]
          Length = 542

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 6/89 (6%)

Query: 151 GIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWLSDTVAVS 210
           G++ ++ +  K +    G   NS+ I+   +L+  CL    GH   +  + +  + V V+
Sbjct: 242 GVYCLQYDDEKII---SGLRDNSIKIWDKTSLE--CLKVLTGHTGSVLCLQY-DERVIVT 295

Query: 211 GSRDGTVALWRMDPDMFNGSIAWHSEVGL 239
           GS D TV +W ++      ++  H+E  L
Sbjct: 296 GSSDSTVRVWDVNTGEVLNTLIHHNEAVL 324


>gi|48928048 F-box and WD repeat domain containing 11 isoform A
           [Homo sapiens]
          Length = 508

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 6/89 (6%)

Query: 151 GIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWLSDTVAVS 210
           G++ ++ +  K +    G   NS+ I+   +L+  CL    GH   +  + +  + V V+
Sbjct: 208 GVYCLQYDDEKII---SGLRDNSIKIWDKTSLE--CLKVLTGHTGSVLCLQY-DERVIVT 261

Query: 211 GSRDGTVALWRMDPDMFNGSIAWHSEVGL 239
           GS D TV +W ++      ++  H+E  L
Sbjct: 262 GSSDSTVRVWDVNTGEVLNTLIHHNEAVL 290


>gi|48928046 F-box and WD repeat domain containing 11 isoform B
           [Homo sapiens]
          Length = 529

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 6/89 (6%)

Query: 151 GIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWLSDTVAVS 210
           G++ ++ +  K +    G   NS+ I+   +L+  CL    GH   +  + +  + V V+
Sbjct: 229 GVYCLQYDDEKII---SGLRDNSIKIWDKTSLE--CLKVLTGHTGSVLCLQY-DERVIVT 282

Query: 211 GSRDGTVALWRMDPDMFNGSIAWHSEVGL 239
           GS D TV +W ++      ++  H+E  L
Sbjct: 283 GSSDSTVRVWDVNTGEVLNTLIHHNEAVL 311


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,569,269
Number of Sequences: 37866
Number of extensions: 936895
Number of successful extensions: 3036
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 2919
Number of HSP's gapped (non-prelim): 184
length of query: 463
length of database: 18,247,518
effective HSP length: 106
effective length of query: 357
effective length of database: 14,233,722
effective search space: 5081438754
effective search space used: 5081438754
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.