Guide to the Human Genome
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Name: DCAF12L2 Sequence: fasta or formatted (463aa) NCBI GI: 61966713
Description:

DDB1 and CUL4 associated factor 12-like 2

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         40           3
 C cysteine            2.2         10           1
 D aspartate           4.1         19           2
 E glutamate           4.3         20           2
 F phenylalanine       3.0         14           1
 G glycine            10.6         49           2
 H histidine           3.0         14           1
 I isoleucine          3.0         14           2
 K lysine              3.9         18           2
 L leucine            11.7         54           2
 M methionine          1.5          7           1
 N asparagine          3.7         17           1
 P proline             5.4         25           1
 Q glutamine           4.8         22           3
 R arginine            7.6         35           3
 S serine              7.6         35           4
 T threonine           4.1         19           1
 V valine              5.8         27           2
 W tryptophan          2.2         10           1
 Y tyrosine            3.0         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DDB1 and CUL4 associated factor 12-like 2 
WDR40B                0.866   WD repeat domain 40B 
WDR40A                0.609   WD repeat domain 40A 
TBL1Y                 0.018   transducin beta-like 1Y 
TBL1Y                 0.018   transducin beta-like 1Y 
TBL1Y                 0.018   transducin beta-like 1Y 
TAF5                  0.016   TBP-associated factor 5 
TBL1X                 0.016   transducin beta-like 1X isoform b 
TBL1X                 0.016   transducin beta-like 1X isoform b 
TBL1X                 0.016   transducin beta-like 1X isoform a 
TBL1X                 0.016   transducin beta-like 1X isoform a 
TEP1                  0.016   telomerase-associated protein 1 
WDR17                 0.016   WD repeat domain 17 isoform 2 
WDR17                 0.016   WD repeat domain 17 isoform 1 
TBL1XR1               0.016   transducin (beta)-like 1 X-linked receptor 1 
CDC20                 0.014   cell division cycle 20 
GNB2                  0.013   guanine nucleotide-binding protein, beta-2 subunit [...
PLRG1                 0.013   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
GNB1L                 0.013   guanine nucleotide binding protein beta-subunit-like...
TBL3                  0.013   transducin beta-like 3 
GNB4                  0.012   guanine nucleotide-binding protein, beta-4 subunit [...
WDR69                 0.012   WD repeat domain 69 
GNB1                  0.011   guanine nucleotide-binding protein, beta-1 subunit [...
KIF21A                0.011   kinesin family member 21A 
BRWD3                 0.009   bromodomain and WD repeat domain containing 3 [Homo...
SCAP                  0.009   SREBF chaperone protein 
RRP9                  0.009   RNA, U3 small nucleolar interacting protein 2 
FBXW11                0.009   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.009   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.009   F-box and WD repeat domain containing 11 isoform B [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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