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Search of human proteins with 61966695
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61966695 hypothetical protein LOC153918 [Homo sapiens]
(222 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61966695 hypothetical protein LOC153918 [Homo sapiens] 454 e-128
gi|223555989 hypothetical protein LOC51101 [Homo sapiens] 177 5e-45
gi|109452611 chromosome 14 open reading frame 140 isoform a [Hom... 55 4e-08
gi|41352718 deltex homolog 1 [Homo sapiens] 38 0.006
gi|46409278 zinc finger protein 474 [Homo sapiens] 37 0.010
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa... 33 0.19
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 33 0.19
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 33 0.19
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 33 0.19
gi|122937382 Fas (TNFRSF6) binding factor 1 [Homo sapiens] 33 0.19
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 33 0.25
gi|239747677 PREDICTED: hypothetical protein [Homo sapiens] 32 0.43
gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo ... 32 0.43
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 32 0.56
gi|219879806 TRAF-type zinc finger domain containing 1 [Homo sap... 32 0.56
gi|5729828 TRAF-type zinc finger domain containing 1 [Homo sapiens] 32 0.56
gi|223941846 zinc finger protein 652 [Homo sapiens] 31 0.74
gi|7662384 zinc finger protein 652 [Homo sapiens] 31 0.74
gi|21328446 hormone-sensitive lipase [Homo sapiens] 31 0.74
gi|15529998 solute carrier family 9 (sodium/hydrogen exchanger),... 31 0.74
gi|125625322 RALBP1 associated Eps domain containing 2 isoform 2... 31 0.74
gi|125625326 RALBP1 associated Eps domain containing 2 isoform 1... 31 0.74
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 31 0.74
gi|4504465 homeobox B2 [Homo sapiens] 31 0.96
gi|150418005 protein tyrosine phosphatase, non-receptor type 21 ... 30 1.3
gi|169168298 PREDICTED: hypothetical protein [Homo sapiens] 30 1.3
gi|126116581 retina and anterior neural fold homeobox [Homo sapi... 30 1.3
gi|194294554 SET binding protein 1 isoform a [Homo sapiens] 30 1.3
gi|55956904 mitogen-activated protein kinase kinase kinase 4 iso... 30 1.3
gi|55956902 mitogen-activated protein kinase kinase kinase 4 iso... 30 1.3
>gi|61966695 hypothetical protein LOC153918 [Homo sapiens]
Length = 222
Score = 454 bits (1167), Expect = e-128
Identities = 222/222 (100%), Positives = 222/222 (100%)
Query: 1 MAGAEPFLADGNQELFPCEVCGRRFAADVLERHGPICKKLFNRKRKPFSSLKQRLQGTDI 60
MAGAEPFLADGNQELFPCEVCGRRFAADVLERHGPICKKLFNRKRKPFSSLKQRLQGTDI
Sbjct: 1 MAGAEPFLADGNQELFPCEVCGRRFAADVLERHGPICKKLFNRKRKPFSSLKQRLQGTDI 60
Query: 61 PTVKKTPQSKSPPVRKSNWRQQHEDFINAIRSAKQCMLAIKEGRPLPPPPPPSLNPDYIQ 120
PTVKKTPQSKSPPVRKSNWRQQHEDFINAIRSAKQCMLAIKEGRPLPPPPPPSLNPDYIQ
Sbjct: 61 PTVKKTPQSKSPPVRKSNWRQQHEDFINAIRSAKQCMLAIKEGRPLPPPPPPSLNPDYIQ 120
Query: 121 RPYCMRRFNESAAERHTNFCKDQSSRRVFNPAQTAAKLASRAQGRAQMGPKKEPTVTSAV 180
RPYCMRRFNESAAERHTNFCKDQSSRRVFNPAQTAAKLASRAQGRAQMGPKKEPTVTSAV
Sbjct: 121 RPYCMRRFNESAAERHTNFCKDQSSRRVFNPAQTAAKLASRAQGRAQMGPKKEPTVTSAV 180
Query: 181 GALLQNRVLVATNEVPTKSGLAMDPASGAKLRQGFSKSSKKD 222
GALLQNRVLVATNEVPTKSGLAMDPASGAKLRQGFSKSSKKD
Sbjct: 181 GALLQNRVLVATNEVPTKSGLAMDPASGAKLRQGFSKSSKKD 222
>gi|223555989 hypothetical protein LOC51101 [Homo sapiens]
Length = 325
Score = 177 bits (450), Expect = 5e-45
Identities = 82/155 (52%), Positives = 107/155 (69%), Gaps = 1/155 (0%)
Query: 14 ELFPCEVCGRRFAADVLERHGPICKKLFNRKRKPFSSLKQRLQGTDIPTVKKTPQSKSPP 73
EL PC++CGR F L++HGPIC+K +KRK F S +QR +GTDIPTVK PP
Sbjct: 15 ELLPCKICGRTFFPVALKKHGPICQKTATKKRKTFDSSRQRAEGTDIPTVKPLKPRPEPP 74
Query: 74 VRKSNWRQQHEDFINAIRSAKQCMLAIKEGRPLPPPPPPSLNPDYIQRPYCMRRFNESAA 133
+ SNWR++HE+FI IR+AK A+KEG LPPPPPPS +PDYIQ PYC RRFNE+AA
Sbjct: 75 KKPSNWRRKHEEFIATIRAAKGLDQALKEGGKLPPPPPPSYDPDYIQCPYCQRRFNENAA 134
Query: 134 ERHTNFCKDQSSRRVFNPAQTAAKLASRAQGRAQM 168
+RH NFCK+Q++ R+ N + + + R Q+
Sbjct: 135 DRHINFCKEQAA-RISNKGKFSTDTKGKPTSRTQV 168
>gi|109452611 chromosome 14 open reading frame 140 isoform a [Homo
sapiens]
Length = 456
Score = 55.5 bits (132), Expect = 4e-08
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 14 ELFPCEVCGRRFAADVLERHGPICKKLFNRKRKPFSSLKQRLQGTDIPTV---KKTPQSK 70
+L C CGR+F + LERH IC ++ KRK F S + R +GT++ K +K
Sbjct: 387 QLGECSHCGRKFLSFRLERHSNICSRMRGSKRKVFDSSRARAKGTELEQYLNWKGPASAK 446
Query: 71 SPPVRKSNWR 80
+ P +KSNWR
Sbjct: 447 AEPPQKSNWR 456
Score = 30.4 bits (67), Expect = 1.3
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 123 YCMRRFNESAAERHTNFCKDQ--SSRRVFNPAQTAAKLASRAQGRAQMGP---KKEP 174
+C R+F ERH+N C S R+VF+ ++ AK Q GP K EP
Sbjct: 393 HCGRKFLSFRLERHSNICSRMRGSKRKVFDSSRARAKGTELEQYLNWKGPASAKAEP 449
>gi|41352718 deltex homolog 1 [Homo sapiens]
Length = 620
Score = 38.1 bits (87), Expect = 0.006
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 42 NRKRKPFSSLKQRLQGTDIPTVKKTPQSKSPPVRKSNWRQ---QHEDFINAIRSAKQCML 98
NR+ + L++RL TV P+S+S PV S+ + Q +N+ R+A +L
Sbjct: 160 NRQTRRRRRLRRRLDLAYPLTVGSIPKSQSWPVGASSGQPCSCQQCLLVNSTRAASNAIL 219
Query: 99 AIKEGR-----PLPPPPPPSLNP 116
A + + PLPPPPPP P
Sbjct: 220 ASQRRKAPPAPPLPPPPPPGGPP 242
>gi|46409278 zinc finger protein 474 [Homo sapiens]
Length = 364
Score = 37.4 bits (85), Expect = 0.010
Identities = 46/200 (23%), Positives = 67/200 (33%), Gaps = 49/200 (24%)
Query: 14 ELFPCEVCGRRFAADVLERHGPICKKLFNRKRKPFSSLKQRLQG-----TDIPTVKKTP- 67
+L PCE CGR F D L H CK R P S+ L G + P +T
Sbjct: 164 QLLPCESCGRTFLPDHLLVHHRSCKPKGEGPRAPHSNSSDHLTGLKKACSGTPARPRTVI 223
Query: 68 --------QSKSPPVRK----SNWRQQHEDFINAIRSAKQCMLAIKEGRPLPPPPPPSLN 115
+ S P+ + W+ +++ L ++ +PLP P P N
Sbjct: 224 CYICGKEFGTLSLPIHEPKCLEKWKMEND------------RLPVELHQPLPQKPQPLPN 271
Query: 116 PDYIQR----------PYCMRRFNESAAERHTNFCKDQSSRRVFNPAQTAAKLASRAQGR 165
Q P+C R F H CK + P L S+ +
Sbjct: 272 AQSSQAGPNQAQLVFCPHCSRIFTSDRLLVHQRSCKTHP----YGPKYQNLNLGSKGGLK 327
Query: 166 AQMGPKKE-----PTVTSAV 180
K++ P+VT V
Sbjct: 328 EYTNSKQQRNRAAPSVTDKV 347
>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
sapiens]
Length = 817
Score = 33.1 bits (74), Expect = 0.19
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 20/126 (15%)
Query: 104 RPLPPPPPPSLNPDYIQRPYCMRRFNESAAERHTNFCKDQSSRRVFNPAQTAA-----KL 158
+ LPP P P +P A+ T+ K Q + PA T K
Sbjct: 426 KELPPSPEKKTKPLATTQP----------AKTSTSKAKTQPTSLPKQPAPTTIGGLNKKP 475
Query: 159 ASRAQGRAQMGPKKEPTVTSAVGALLQNRVL----VATNEVPTKSGLAMDPASGAKLRQG 214
S A G P K P V SA ++L ++ + +A + P K PAS R G
Sbjct: 476 MSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSG 535
Query: 215 FSKSSK 220
SKS++
Sbjct: 536 -SKSTQ 540
>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
sapiens]
Length = 1135
Score = 33.1 bits (74), Expect = 0.19
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 20/126 (15%)
Query: 104 RPLPPPPPPSLNPDYIQRPYCMRRFNESAAERHTNFCKDQSSRRVFNPAQTAA-----KL 158
+ LPP P P +P A+ T+ K Q + PA T K
Sbjct: 691 KELPPSPEKKTKPLATTQP----------AKTSTSKAKTQPTSLPKQPAPTTIGGLNKKP 740
Query: 159 ASRAQGRAQMGPKKEPTVTSAVGALLQNRVL----VATNEVPTKSGLAMDPASGAKLRQG 214
S A G P K P V SA ++L ++ + +A + P K PAS R G
Sbjct: 741 MSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSG 800
Query: 215 FSKSSK 220
SKS++
Sbjct: 801 -SKSTQ 805
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
sapiens]
Length = 887
Score = 33.1 bits (74), Expect = 0.19
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 20/126 (15%)
Query: 104 RPLPPPPPPSLNPDYIQRPYCMRRFNESAAERHTNFCKDQSSRRVFNPAQTAA-----KL 158
+ LPP P P +P A+ T+ K Q + PA T K
Sbjct: 426 KELPPSPEKKTKPLATTQP----------AKTSTSKAKTQPTSLPKQPAPTTIGGLNKKP 475
Query: 159 ASRAQGRAQMGPKKEPTVTSAVGALLQNRVL----VATNEVPTKSGLAMDPASGAKLRQG 214
S A G P K P V SA ++L ++ + +A + P K PAS R G
Sbjct: 476 MSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSG 535
Query: 215 FSKSSK 220
SKS++
Sbjct: 536 -SKSTQ 540
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
sapiens]
Length = 1152
Score = 33.1 bits (74), Expect = 0.19
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 20/126 (15%)
Query: 104 RPLPPPPPPSLNPDYIQRPYCMRRFNESAAERHTNFCKDQSSRRVFNPAQTAA-----KL 158
+ LPP P P +P A+ T+ K Q + PA T K
Sbjct: 691 KELPPSPEKKTKPLATTQP----------AKTSTSKAKTQPTSLPKQPAPTTIGGLNKKP 740
Query: 159 ASRAQGRAQMGPKKEPTVTSAVGALLQNRVL----VATNEVPTKSGLAMDPASGAKLRQG 214
S A G P K P V SA ++L ++ + +A + P K PAS R G
Sbjct: 741 MSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSG 800
Query: 215 FSKSSK 220
SKS++
Sbjct: 801 -SKSTQ 805
>gi|122937382 Fas (TNFRSF6) binding factor 1 [Homo sapiens]
Length = 1133
Score = 33.1 bits (74), Expect = 0.19
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 80 RQQHEDFINAIRSAKQCMLAIKEGRPLPPPPPPSLNPDYIQRPYCMRRFNESAAERHTNF 139
+QQH+ + I SA + + + L Y QR +RR NE + R+ +
Sbjct: 614 QQQHQADLELIESAHRSRIKV-------------LETSYQQREERLRRENEELSARYLSQ 660
Query: 140 CKDQSSRRVFNPAQTAAKLASRAQGRAQ 167
C++ R AQ +LA+ AQ + Q
Sbjct: 661 CQEAEQARAELTAQHQRRLAAIAQEKDQ 688
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 32.7 bits (73), Expect = 0.25
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 105 PLPPPPPPSLNPDYIQR---PYCMRRFNESAAERHTNFCKDQSSRRVFNPAQTAAKLASR 161
PL PPPPP ++P + P ES C + R P+Q A + A+R
Sbjct: 427 PLCPPPPPPVSPPPLPSPPPPPAQEEQEESPPPVVPATCSRKRGRPPLTPSQRAEREAAR 486
Query: 162 AQGRAQMGPKKEPTVTSAVGALLQNRVLVA 191
A P PT ++A G ++ VA
Sbjct: 487 AGPEGTSPP--TPTPSTATGGPPEDSPTVA 514
>gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 32.0 bits (71), Expect = 0.43
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 13/94 (13%)
Query: 98 LAIKEGRPLPPPP-PPSLNPDYIQRPYCMRRFNESAAERHTNFCKD-----QSSRRVFNP 151
LA P PPPP PPSL I +P RR S C + ++ P
Sbjct: 117 LAQPRAGPAPPPPGPPSLRRAPINQP---RRCQSSGGSPRRCHCSSVPGAPAPASQLPRP 173
Query: 152 AQTAAKL----ASRAQGRAQMGPKKEPTVTSAVG 181
A K+ A+R GR+ +G EP + A G
Sbjct: 174 AGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAG 207
>gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo
sapiens]
Length = 262
Score = 32.0 bits (71), Expect = 0.43
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 13/94 (13%)
Query: 98 LAIKEGRPLPPPP-PPSLNPDYIQRPYCMRRFNESAAERHTNFCKD-----QSSRRVFNP 151
LA P PPPP PPSL I +P RR S C + ++ P
Sbjct: 117 LAQPRAGPAPPPPGPPSLRRAPINQP---RRCQSSGGSPRRCHCSSVPGAPAPASQLPRP 173
Query: 152 AQTAAKL----ASRAQGRAQMGPKKEPTVTSAVG 181
A K+ A+R GR+ +G EP + A G
Sbjct: 174 AGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAG 207
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 31.6 bits (70), Expect = 0.56
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 DFINAIRSAKQCMLAIKEGRPLPPPPPPSLNPDYIQRP 122
DFI + ++ PLPPPPPPS + + RP
Sbjct: 292 DFIEDQGGLEAVRQEMRRQEPLPPPPPPSRGGNQLPRP 329
>gi|219879806 TRAF-type zinc finger domain containing 1 [Homo
sapiens]
Length = 582
Score = 31.6 bits (70), Expect = 0.56
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 15 LFPCEVCGRRFAADVLERHGPICKKLFNRKRKPFSSLKQRLQGTDIPTVKKTPQSKSPPV 74
+ PCE CG + +VL H C ++P ++ +G IP + PQ SP +
Sbjct: 367 IIPCEFCGVQLEEEVLFHHQDQC------DQRPATATNHVTEG--IPRLDSQPQETSPEL 418
Query: 75 RKSNWRQQ 82
+ R Q
Sbjct: 419 PRRRVRHQ 426
>gi|5729828 TRAF-type zinc finger domain containing 1 [Homo sapiens]
Length = 582
Score = 31.6 bits (70), Expect = 0.56
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 15 LFPCEVCGRRFAADVLERHGPICKKLFNRKRKPFSSLKQRLQGTDIPTVKKTPQSKSPPV 74
+ PCE CG + +VL H C ++P ++ +G IP + PQ SP +
Sbjct: 367 IIPCEFCGVQLEEEVLFHHQDQC------DQRPATATNHVTEG--IPRLDSQPQETSPEL 418
Query: 75 RKSNWRQQ 82
+ R Q
Sbjct: 419 PRRRVRHQ 426
>gi|223941846 zinc finger protein 652 [Homo sapiens]
Length = 606
Score = 31.2 bits (69), Expect = 0.74
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 16 FPCEVCGRRFA-ADVLERHGPICKKLFNRKRKP--FSSLKQRLQGTDIPTVKKTPQSKSP 72
+PC+VCG+RF +++L+ H C ++ + P T +P+V T + +P
Sbjct: 469 YPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVPPAVQIPLTTSPATPVPSVVNTATTPTP 528
Query: 73 PV 74
P+
Sbjct: 529 PI 530
>gi|7662384 zinc finger protein 652 [Homo sapiens]
Length = 606
Score = 31.2 bits (69), Expect = 0.74
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 16 FPCEVCGRRFA-ADVLERHGPICKKLFNRKRKP--FSSLKQRLQGTDIPTVKKTPQSKSP 72
+PC+VCG+RF +++L+ H C ++ + P T +P+V T + +P
Sbjct: 469 YPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVPPAVQIPLTTSPATPVPSVVNTATTPTP 528
Query: 73 PV 74
P+
Sbjct: 529 PI 530
>gi|21328446 hormone-sensitive lipase [Homo sapiens]
Length = 1076
Score = 31.2 bits (69), Expect = 0.74
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 16/167 (9%)
Query: 55 LQGTDIPTVKKTPQSKSPPVRKSNWRQQHEDFINAIRSAKQCMLAIKEGRPLPPPPPPSL 114
LQG++ ++ P S P+ + QH+ A+Q A +E P P P
Sbjct: 42 LQGSN---TQQKPASNQRPLTQQETPAQHDAESQKEPRAQQ-KSASQEEFLAPQKPAPQQ 97
Query: 115 NPDYIQRPYCMRRFNESAAERHTNFCKDQSSRRVFNPAQTAAKLASRAQGRAQMGPKKE- 173
+P YIQR ++ E+A+++ K+ +++ PA +A G + P ++
Sbjct: 98 SP-YIQRVLLTQQ--EAASQQGPGLGKESITQQ--EPALRQRHVAQPGPGPGEPPPAQQE 152
Query: 174 ----PTVTSAVGALLQNRVLV--ATNEVPTKSGLAMDPASGAKLRQG 214
P + GA + + E P +S P GAK +QG
Sbjct: 153 AESTPAAQAKPGAKREPSAPTESTSQETPEQSDKQTTPVQGAKSKQG 199
>gi|15529998 solute carrier family 9 (sodium/hydrogen exchanger),
member 2 [Homo sapiens]
Length = 812
Score = 31.2 bits (69), Expect = 0.74
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 9 ADGNQELFPCEVCGRRFAADVLERHGPICKKLFNRKRKPFSSLKQRLQGTDIPTVKKTPQ 68
AD + + RRF + + P K+ + S G D+P+ TP
Sbjct: 698 ADAGTTVLNLQPRARRFLPEQFSKKSPQSYKMEWKNEVDVDS------GRDMPSTPPTPH 751
Query: 69 SKSPPVRKSNWRQQHEDFINAIRSAKQCMLAIKEGRPLPPPPPPSL 114
S+ + S QQ ++ +S + ++ EG +PP PPP L
Sbjct: 752 SREKGTQTSGLLQQ--PLLSKDQSGSEREDSLTEG--IPPKPPPRL 793
>gi|125625322 RALBP1 associated Eps domain containing 2 isoform 2
[Homo sapiens]
Length = 659
Score = 31.2 bits (69), Expect = 0.74
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 66 TPQSKSPPVRKSNWRQQHEDFINAIRSAKQC-----MLAIKEGRPLPPPPPPSLNPDYIQ 120
T S P W D A+ + C ++A K G PLP PP+L P+Y+Q
Sbjct: 310 TKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIVARKNGYPLPEGLPPTLQPEYLQ 369
Query: 121 RPY 123
+
Sbjct: 370 AAF 372
>gi|125625326 RALBP1 associated Eps domain containing 2 isoform 1
[Homo sapiens]
Length = 660
Score = 31.2 bits (69), Expect = 0.74
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 66 TPQSKSPPVRKSNWRQQHEDFINAIRSAKQC-----MLAIKEGRPLPPPPPPSLNPDYIQ 120
T S P W D A+ + C ++A K G PLP PP+L P+Y+Q
Sbjct: 311 TKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIVARKNGYPLPEGLPPTLQPEYLQ 370
Query: 121 RPY 123
+
Sbjct: 371 AAF 373
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 31.2 bits (69), Expect = 0.74
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 105 PLPPPPPPSLNPDYIQRPYCMRRFNESAAERHT-NFCKDQSSRRVFNPAQTAAKLASRAQ 163
P PPPP PS P ++ + SA E+H+ +F + S + N + AK+ +
Sbjct: 2365 PPPPPPTPSQKPAHL--------LSSSAPEKHSGDFMQQYSQKEASNSQNSQAKIITGKT 2416
Query: 164 G 164
G
Sbjct: 2417 G 2417
>gi|4504465 homeobox B2 [Homo sapiens]
Length = 356
Score = 30.8 bits (68), Expect = 0.96
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 19/67 (28%)
Query: 86 FINAIRSAKQCMLA------------IKEGRPLPPPPP-----PSLNP--DYIQRPYCMR 126
FIN+ S +C+ + IKE +PPPPP PSL P +QRP +
Sbjct: 11 FINSQPSLAECLTSFPAVLETFQTSSIKESTLIPPPPPFEQTFPSLQPGASTLQRPRSQK 70
Query: 127 RFNESAA 133
R + A
Sbjct: 71 RAEDGPA 77
>gi|150418005 protein tyrosine phosphatase, non-receptor type 21
[Homo sapiens]
Length = 1174
Score = 30.4 bits (67), Expect = 1.3
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 87 INAIRSAKQCMLAIKEGRPLPPPPPPSLNPD-YIQRPYCMRRFNESAAERHTNFCKDQSS 145
+N IR +++ + +P PPPP L+ + + PY + N ++ +C Q+S
Sbjct: 318 VNPIRRRSSSRMSLPKPQPYVMPPPPQLHYNGHYTEPYASSQDNLFVPNQNGYYCHSQTS 377
>gi|169168298 PREDICTED: hypothetical protein [Homo sapiens]
Length = 220
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 12 NQELFPCEVCGRRFAADVLERHGPICK 38
+ +L PC VCGR F D L H CK
Sbjct: 189 HSQLVPCNVCGRTFLPDRLIVHQQSCK 215
>gi|126116581 retina and anterior neural fold homeobox [Homo
sapiens]
Length = 346
Score = 30.4 bits (67), Expect = 1.3
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 96 CMLAIKEGRPLPPPPPPSLNPDY-IQRPYCMRRFNES 131
C A +EG PPP P+ P+Y RPYC + E+
Sbjct: 73 CPKAPEEGSEPSPPPAPAPAPEYEAPRPYCPKEPGEA 109
>gi|194294554 SET binding protein 1 isoform a [Homo sapiens]
Length = 1596
Score = 30.4 bits (67), Expect = 1.3
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 59 DIPTVKKTPQSKSPPVRKSNWRQQHEDFINAIRSAKQCMLAIKEGRPLPPPPPPSLNP 116
D+P+ + S SP V + Q D I A A M +E PLPPPPPP L P
Sbjct: 1480 DLPSKRGQKPSLSPLVLEPAASQ---DTIMATIEAVIHMA--REAPPLPPPPPPPLPP 1532
Score = 28.1 bits (61), Expect = 6.2
Identities = 10/12 (83%), Positives = 10/12 (83%)
Query: 105 PLPPPPPPSLNP 116
PLPPPPPP L P
Sbjct: 1529 PLPPPPPPPLPP 1540
>gi|55956904 mitogen-activated protein kinase kinase kinase 4
isoform a [Homo sapiens]
Length = 1608
Score = 30.4 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 99 AIKEGRPLPPPPPPSLNPDYIQRPYC 124
A++E P PPPPPP P+ P C
Sbjct: 21 AMEEPPPPPPPPPPPPEPETESEPEC 46
>gi|55956902 mitogen-activated protein kinase kinase kinase 4
isoform b [Homo sapiens]
Length = 1558
Score = 30.4 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 99 AIKEGRPLPPPPPPSLNPDYIQRPYC 124
A++E P PPPPPP P+ P C
Sbjct: 21 AMEEPPPPPPPPPPPPEPETESEPEC 46
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,862,829
Number of Sequences: 37866
Number of extensions: 492796
Number of successful extensions: 6082
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 5669
Number of HSP's gapped (non-prelim): 387
length of query: 222
length of database: 18,247,518
effective HSP length: 98
effective length of query: 124
effective length of database: 14,536,650
effective search space: 1802544600
effective search space used: 1802544600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.