TRAFD1 33348

Name: TRAFD1	Sequence: fasta or formatted (582aa)		NCBI GI: 5729828
Description: TRAF-type zinc finger domain containing 1		Referenced in: Protease Inhibitors
Other entries for this name: alt mRNA [582aa] TRAF-type zinc finger domain containing 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 36 3 C cysteine 4.3 25 1 D aspartate 5.0 29 2 E glutamate 10.1 59 6 F phenylalanine 2.6 15 1 G glycine 6.2 36 2 H histidine 2.9 17 2 I isoleucine 4.1 24 3 K lysine 3.8 22 2 L leucine 7.7 45 2 M methionine 1.5 9 1 N asparagine 5.7 33 2 P proline 7.9 46 2 Q glutamine 6.7 39 2 R arginine 6.9 40 3 S serine 8.2 48 3 T threonine 4.3 25 2 V valine 4.0 23 1 W tryptophan 0.5 3 1 Y tyrosine 1.4 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TRAF-type zinc finger domain containing 1 TRAFD1 1.000 TRAF-type zinc finger domain containing 1 XAF1 0.085 XIAP associated factor 1 isoform 1 XAF1 0.067 XIAP associated factor 1 isoform 2 TRAF6 0.017 TNF receptor-associated factor 6 TRAF6 0.017 TNF receptor-associated factor 6 TRAF4 0.017 TNF receptor-associated factor 4 TRAF3 0.015 TNF receptor-associated factor 3 isoform 2 TRAF2 0.014 TNF receptor-associated factor 2 TRAF5 0.014 TNF receptor-associated factor 5 TRAF5 0.014 TNF receptor-associated factor 5 TRAF5 0.014 TNF receptor-associated factor 5 ZNF585B 0.014 zinc finger protein 585B TRAF3 0.013 TNF receptor-associated factor 3 isoform 1 TRAF3 0.013 TNF receptor-associated factor 3 isoform 1 MYST4 0.013 MYST histone acetyltransferase (monocytic leukemia)... PRDM10 0.012 PR domain containing 10 isoform 2 PRDM10 0.012 PR domain containing 10 isoform 4 PRDM10 0.012 PR domain containing 10 isoform 1 PRDM10 0.012 PR domain containing 10 isoform 3 ZNF133 0.011 zinc finger protein 133 ZNF133 0.011 zinc finger protein 133 ZNF614 0.010 zinc finger protein 614 ZNF282 0.010 zinc finger protein 282 ZNF157 0.009 zinc finger protein 157 ZNF668 0.008 zinc finger protein 668 LOC100293596 0.008 PREDICTED: similar to mucin ZNF236 0.008 zinc finger protein 236 PRDM5 0.008 PR domain containing 5 SRRM2 0.008 splicing coactivator subunit SRm300 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.