Search of human proteins with 61743967

Search of human proteins with 61743967

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|61743967 C-terminal binding protein 1 isoform 2 [Homo
sapiens]
         (429 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|61743967 C-terminal binding protein 1 isoform 2 [Homo sapiens]     862   0.0  
gi|4557497 C-terminal binding protein 1 isoform 1 [Homo sapiens]      859   0.0  
gi|145580578 C-terminal binding protein 2 isoform 1 [Homo sapiens]    725   0.0  
gi|4557499 C-terminal binding protein 2 isoform 1 [Homo sapiens]      725   0.0  
gi|145580575 C-terminal binding protein 2 isoform 2 [Homo sapiens]    723   0.0  
gi|23308577 phosphoglycerate dehydrogenase [Homo sapiens]             143   3e-34
gi|6912396 glyoxylate reductase/hydroxypyruvate reductase [Homo ...    89   1e-17
gi|93004092 nuclear factor I/B [Homo sapiens]                          34   0.29 
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]          33   0.50 
gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]          33   0.50 
gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]          33   0.50 
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r...    32   0.85 
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap...    32   1.1  
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    31   1.9  
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    31   1.9  
gi|83367077 mucin 16 [Homo sapiens]                                    31   2.5  
gi|160707881 formin 2 [Homo sapiens]                                   31   2.5  
gi|7662346 ADNP homeobox 2 [Homo sapiens]                              31   2.5  
gi|24308352 DMRT-like family B with proline-rich C-terminal, 1 [...    31   2.5  
gi|8567388 period 3 [Homo sapiens]                                     30   3.2  
gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isofo...    30   3.2  
gi|41327769 Rho/Rac guanine nucleotide exchange factor 18 isofor...    30   3.2  
gi|23308751 3-hydroxyisobutyrate dehydrogenase [Homo sapiens]          30   3.2  
gi|116325989 hyperpolarization activated cyclic nucleotide-gated...    30   4.2  
gi|31542493 D site of albumin promoter (albumin D-box) binding p...    30   4.2  
gi|46370073 GRB2-associated binding protein 1 isoform b [Homo sa...    30   4.2  
gi|46370071 GRB2-associated binding protein 1 isoform a [Homo sa...    30   4.2  
gi|169168458 PREDICTED: hypothetical protein [Homo sapiens]            30   4.2  
gi|239742749 PREDICTED: hypothetical protein XP_002342626 [Homo ...    30   4.2  
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re...    30   4.2  

>gi|61743967 C-terminal binding protein 1 isoform 2 [Homo sapiens]
          Length = 429

 Score =  862 bits (2228), Expect = 0.0
 Identities = 429/429 (100%), Positives = 429/429 (100%)

Query: 1   MSGVRPPIMNGPLHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAV 60
           MSGVRPPIMNGPLHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAV
Sbjct: 1   MSGVRPPIMNGPLHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAV 60

Query: 61  GALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADS 120
           GALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADS
Sbjct: 61  GALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADS 120

Query: 121 TLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVAL 180
           TLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVAL
Sbjct: 121 TLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVAL 180

Query: 181 RAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFT 240
           RAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFT
Sbjct: 181 RAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFT 240

Query: 241 VKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLI 300
           VKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLI
Sbjct: 241 VKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLI 300

Query: 301 CTPHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATHWASMDPAVVH 360
           CTPHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATHWASMDPAVVH
Sbjct: 301 CTPHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATHWASMDPAVVH 360

Query: 361 PELNGAAYRYPPGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEA 420
           PELNGAAYRYPPGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEA
Sbjct: 361 PELNGAAYRYPPGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEA 420

Query: 421 DRDHASDQL 429
           DRDHASDQL
Sbjct: 421 DRDHASDQL 429


>gi|4557497 C-terminal binding protein 1 isoform 1 [Homo sapiens]
          Length = 440

 Score =  859 bits (2219), Expect = 0.0
 Identities = 427/427 (100%), Positives = 427/427 (100%)

Query: 3   GVRPPIMNGPLHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGA 62
           GVRPPIMNGPLHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGA
Sbjct: 14  GVRPPIMNGPLHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGA 73

Query: 63  LMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTL 122
           LMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTL
Sbjct: 74  LMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTL 133

Query: 123 CHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRA 182
           CHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRA
Sbjct: 134 CHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRA 193

Query: 183 KAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVK 242
           KAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVK
Sbjct: 194 KAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVK 253

Query: 243 QMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICT 302
           QMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICT
Sbjct: 254 QMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICT 313

Query: 303 PHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATHWASMDPAVVHPE 362
           PHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATHWASMDPAVVHPE
Sbjct: 314 PHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATHWASMDPAVVHPE 373

Query: 363 LNGAAYRYPPGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEADR 422
           LNGAAYRYPPGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEADR
Sbjct: 374 LNGAAYRYPPGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEADR 433

Query: 423 DHASDQL 429
           DHASDQL
Sbjct: 434 DHASDQL 440


>gi|145580578 C-terminal binding protein 2 isoform 1 [Homo sapiens]
          Length = 445

 Score =  725 bits (1871), Expect = 0.0
 Identities = 345/426 (80%), Positives = 388/426 (91%)

Query: 3   GVRPPIMNGPLHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGA 62
           G+RP IMNGPLHPRPLVALLDGRDCTVEMPILKD+ATVAFCDAQSTQEIHEKVLNEAVGA
Sbjct: 20  GIRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGA 79

Query: 63  LMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTL 122
           +MYHTITLTREDLEKFKALR+IVRIGSG+DN+DIK+AG+LGIAVCN+P+A+VEETADST+
Sbjct: 80  MMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTI 139

Query: 123 CHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRA 182
           CHILNLYRR TWL+QALREGTRVQSVEQIREVASGAARIRGETLG+IG GR GQAVA+RA
Sbjct: 140 CHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRA 199

Query: 183 KAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVK 242
           KAFGF+V+FYDPYL DG+ER+LG+QRV TLQDLL+ SDCV+LHC LNEHNHHLINDFT+K
Sbjct: 200 KAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIK 259

Query: 243 QMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICT 302
           QMRQGAFLVN ARGGLVDEKALAQALKEGRIRGAALDVHESEPFSF+QGPLKDAPNLICT
Sbjct: 260 QMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICT 319

Query: 303 PHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATHWASMDPAVVHPE 362
           PH AWYSEQAS+EMRE AA EIRRAITGRIP+SL+NCVNK+    +  W+ +D   +HPE
Sbjct: 320 PHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKEFFVTSAPWSVIDQQAIHPE 379

Query: 363 LNGAAYRYPPGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEADR 422
           LNGA YRYPPG+VGVAP G+PAA+EGI+P  + ++H LP VAHP  APSP Q  K   +R
Sbjct: 380 LNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNR 439

Query: 423 DHASDQ 428
           +H ++Q
Sbjct: 440 EHPNEQ 445


>gi|4557499 C-terminal binding protein 2 isoform 1 [Homo sapiens]
          Length = 445

 Score =  725 bits (1871), Expect = 0.0
 Identities = 345/426 (80%), Positives = 388/426 (91%)

Query: 3   GVRPPIMNGPLHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGA 62
           G+RP IMNGPLHPRPLVALLDGRDCTVEMPILKD+ATVAFCDAQSTQEIHEKVLNEAVGA
Sbjct: 20  GIRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGA 79

Query: 63  LMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTL 122
           +MYHTITLTREDLEKFKALR+IVRIGSG+DN+DIK+AG+LGIAVCN+P+A+VEETADST+
Sbjct: 80  MMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTI 139

Query: 123 CHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRA 182
           CHILNLYRR TWL+QALREGTRVQSVEQIREVASGAARIRGETLG+IG GR GQAVA+RA
Sbjct: 140 CHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRA 199

Query: 183 KAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVK 242
           KAFGF+V+FYDPYL DG+ER+LG+QRV TLQDLL+ SDCV+LHC LNEHNHHLINDFT+K
Sbjct: 200 KAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIK 259

Query: 243 QMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICT 302
           QMRQGAFLVN ARGGLVDEKALAQALKEGRIRGAALDVHESEPFSF+QGPLKDAPNLICT
Sbjct: 260 QMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICT 319

Query: 303 PHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATHWASMDPAVVHPE 362
           PH AWYSEQAS+EMRE AA EIRRAITGRIP+SL+NCVNK+    +  W+ +D   +HPE
Sbjct: 320 PHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKEFFVTSAPWSVIDQQAIHPE 379

Query: 363 LNGAAYRYPPGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEADR 422
           LNGA YRYPPG+VGVAP G+PAA+EGI+P  + ++H LP VAHP  APSP Q  K   +R
Sbjct: 380 LNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNR 439

Query: 423 DHASDQ 428
           +H ++Q
Sbjct: 440 EHPNEQ 445


>gi|145580575 C-terminal binding protein 2 isoform 2 [Homo sapiens]
          Length = 985

 Score =  723 bits (1865), Expect = 0.0
 Identities = 344/425 (80%), Positives = 387/425 (91%)

Query: 4   VRPPIMNGPLHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGAL 63
           +RP IMNGPLHPRPLVALLDGRDCTVEMPILKD+ATVAFCDAQSTQEIHEKVLNEAVGA+
Sbjct: 561 IRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGAM 620

Query: 64  MYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLC 123
           MYHTITLTREDLEKFKALR+IVRIGSG+DN+DIK+AG+LGIAVCN+P+A+VEETADST+C
Sbjct: 621 MYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTIC 680

Query: 124 HILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAK 183
           HILNLYRR TWL+QALREGTRVQSVEQIREVASGAARIRGETLG+IG GR GQAVA+RAK
Sbjct: 681 HILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAK 740

Query: 184 AFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQ 243
           AFGF+V+FYDPYL DG+ER+LG+QRV TLQDLL+ SDCV+LHC LNEHNHHLINDFT+KQ
Sbjct: 741 AFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQ 800

Query: 244 MRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTP 303
           MRQGAFLVN ARGGLVDEKALAQALKEGRIRGAALDVHESEPFSF+QGPLKDAPNLICTP
Sbjct: 801 MRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTP 860

Query: 304 HAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATHWASMDPAVVHPEL 363
           H AWYSEQAS+EMRE AA EIRRAITGRIP+SL+NCVNK+    +  W+ +D   +HPEL
Sbjct: 861 HTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKEFFVTSAPWSVIDQQAIHPEL 920

Query: 364 NGAAYRYPPGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEADRD 423
           NGA YRYPPG+VGVAP G+PAA+EGI+P  + ++H LP VAHP  APSP Q  K   +R+
Sbjct: 921 NGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNRE 980

Query: 424 HASDQ 428
           H ++Q
Sbjct: 981 HPNEQ 985


>gi|23308577 phosphoglycerate dehydrogenase [Homo sapiens]
          Length = 533

 Score =  143 bits (361), Expect = 3e-34
 Identities = 97/293 (33%), Positives = 156/293 (53%), Gaps = 13/293 (4%)

Query: 56  LNEAVGALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVE 115
           L +  G ++     +T + +   + L+++ R G+G DN+D+++A   GI V N P  +  
Sbjct: 45  LQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSL 104

Query: 116 ETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVG 175
             A+ T   I+ L R+      ++++G      +  R+   G   + G+TLGI+GLGR+G
Sbjct: 105 SAAELTCGMIMCLARQIPQATASMKDG------KWERKKFMGT-ELNGKTLGILGLGRIG 157

Query: 176 QAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHL 235
           + VA R ++FG   + YDP +S  V  + G+Q++  L+++    D +T+H  L      L
Sbjct: 158 REVATRMQSFGMKTIGYDPIISPEVSASFGVQQLP-LEEIWPLCDFITVHTPLLPSTTGL 216

Query: 236 INDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKD 295
           +ND T  Q ++G  +VN ARGG+VDE AL +AL+ G+  GAALDV   EP       L D
Sbjct: 217 LNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP--PRDRALVD 274

Query: 296 APNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAA 348
             N+I  PH    +++A     EE A +    + G+   SL   VN   LT+A
Sbjct: 275 HENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGK---SLTGVVNAQALTSA 324


>gi|6912396 glyoxylate reductase/hydroxypyruvate reductase [Homo
           sapiens]
          Length = 328

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 6/258 (2%)

Query: 81  LRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALR 140
           L++I  +  G D++ +      GI V   P    + TA+  +  +L   RR     + ++
Sbjct: 75  LKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVK 134

Query: 141 EGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV 200
            G    S + +     G  +    T+GIIGLGR+GQA+A R K FG     Y        
Sbjct: 135 NGGWT-SWKPLWLCGYGLTQ---STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPE 190

Query: 201 ERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVD 260
           E A       +  +L   SD + + C L      L N    ++M++ A  +N +RG +V+
Sbjct: 191 EAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVN 250

Query: 261 EKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEA 320
           +  L QAL  G+I  A LDV   EP   +  PL    N +  PH    + +    M   A
Sbjct: 251 QDDLYQALASGKIAAAGLDVTSPEPLP-TNHPLLTLKNCVILPHIGSATHRTRNTMSLLA 309

Query: 321 AREIRRAITGR-IPDSLK 337
           A  +   + G  +P  LK
Sbjct: 310 ANNLLAGLRGEPMPSELK 327


>gi|93004092 nuclear factor I/B [Homo sapiens]
          Length = 420

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 12/78 (15%)

Query: 351 WASMDPAVVHPELNGAAYRYPPGVVGVA-----------PTGIPAAVEGIVPSAMSLSHG 399
           ++S  P    P L+     + PG+ GVA           P+ +P   + I+P A S    
Sbjct: 324 FSSASPQDSSPRLSTFPQHHHPGIPGVAHSVISTRTPPPPSPLPFPTQAILPPAPSSYFS 383

Query: 400 LPPVAHPPHAPSPGQTVK 417
            P + +PPH  +P  T+K
Sbjct: 384 HPTIRYPPHL-NPQDTLK 400


>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
          Length = 2790

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%)

Query: 356  PAVVHPELNGAAYRYPPGVV-GVAPTG--IPAAVEGIVPSAMSLSHGLPP------VAHP 406
            PAV  P+L GA ++   G+  G+ P    IP  + G++P+A+      PP         P
Sbjct: 2577 PAVFGPQLQGAYFQQLYGMKKGLFPMNPMIPQTLIGLLPNALLQPPPQPPEPTATAPPKP 2636

Query: 407  PHAPSPGQTVKPEAD 421
            P  P+PG+    E D
Sbjct: 2637 PELPAPGEGEAGEVD 2651


>gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
          Length = 2706

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%)

Query: 356  PAVVHPELNGAAYRYPPGVV-GVAPTG--IPAAVEGIVPSAMSLSHGLPP------VAHP 406
            PAV  P+L GA ++   G+  G+ P    IP  + G++P+A+      PP         P
Sbjct: 2493 PAVFGPQLQGAYFQQLYGMKKGLFPMNPMIPQTLIGLLPNALLQPPPQPPEPTATAPPKP 2552

Query: 407  PHAPSPGQTVKPEAD 421
            P  P+PG+    E D
Sbjct: 2553 PELPAPGEGEAGEVD 2567


>gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
          Length = 2706

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%)

Query: 356  PAVVHPELNGAAYRYPPGVV-GVAPTG--IPAAVEGIVPSAMSLSHGLPP------VAHP 406
            PAV  P+L GA ++   G+  G+ P    IP  + G++P+A+      PP         P
Sbjct: 2493 PAVFGPQLQGAYFQQLYGMKKGLFPMNPMIPQTLIGLLPNALLQPPPQPPEPTATAPPKP 2552

Query: 407  PHAPSPGQTVKPEAD 421
            P  P+PG+    E D
Sbjct: 2553 PELPAPGEGEAGEVD 2567


>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin c2 isoform c [Homo sapiens]
          Length = 1152

 Score = 32.3 bits (72), Expect = 0.85
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 372  PGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKP 418
            PGV   +P  + A    ++PSA  L     P+   P APSPG TV P
Sbjct: 1102 PGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPG-TVTP 1147


>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
           sapiens]
          Length = 288

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 31/92 (33%), Positives = 37/92 (40%), Gaps = 14/92 (15%)

Query: 338 NCVNKDHLTAATHWASMDPAVVHPELNGAAYRYP---PGVVGVAPTGIPAAVEGIV---- 390
           +C N  +L   T W++  P VV   L  A    P   P  V     G PAA    V    
Sbjct: 67  SCGNTRNLYPLTPWSA--PVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAA 124

Query: 391 --PSAMSLSHGLPPVAHPPHAPSPGQTVKPEA 420
             PSA SL    PP A P   P+    V+P A
Sbjct: 125 ADPSAASLCAASPPAAVPAAVPA---AVRPPA 153



 Score = 28.9 bits (63), Expect = 9.4
 Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 15/75 (20%)

Query: 345 LTAATHWA-SMDPAVVHPELNGAAYRYP---------PGVVGVAPTGIPAAVEGIVPSAM 394
           LT A  W  +  PA V P   G     P         P    +     PAAV   VP+A+
Sbjct: 90  LTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAV 149

Query: 395 SLSHGLPPVAHPPHA 409
                 PP A PP A
Sbjct: 150 R-----PPAAGPPAA 159


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 375 VGVAPTGIPAAVEGIVPSAMSLSH--GLPPVAHPPHAPSPGQTVKP 418
           VG  P  IP  V        S  H  G PPV   P  PSPG T  P
Sbjct: 176 VGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPP 221


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 375 VGVAPTGIPAAVEGIVPSAMSLSH--GLPPVAHPPHAPSPGQTVKP 418
           VG  P  IP  V        S  H  G PPV   P  PSPG T  P
Sbjct: 176 VGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPP 221


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 372   PGV---VGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEADRDHASDQ 428
             PGV    GV  T IP ++ G+V S ++ S      A P   PSPG+     +   H   Q
Sbjct: 11610 PGVDTRSGVPTTTIPPSIPGVVTSQVTSSATDTSTAIPTLTPSPGEPETTASSATHPGTQ 11669


>gi|160707881 formin 2 [Homo sapiens]
          Length = 1722

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 361  PELNGAAYRYPPGVVGVA---PTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVK 417
            P L G     PP + GV    P  +P A  GI P       G+PP   PP  P PG  + 
Sbjct: 1177 PPLPGVGIPPPPPLPGVGIPPPPPLPGA--GIPPPPPLPGMGIPPAPAPP-LPPPGTGIP 1233

Query: 418  P 418
            P
Sbjct: 1234 P 1234



 Score = 29.3 bits (64), Expect = 7.2
 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 11/67 (16%)

Query: 361  PELNGAAYRYPPGVVGVA---PTGIPAAVEGIVPSAMSLSHGLPP------VAHPPHAPS 411
            P L GAA   PP + G     P  +P A  GI P       G+PP         PP  P 
Sbjct: 946  PPLPGAAIPPPPPLPGAGIPLPPPLPGA--GIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1003

Query: 412  PGQTVKP 418
            PG  + P
Sbjct: 1004 PGAGIPP 1010



 Score = 29.3 bits (64), Expect = 7.2
 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 11/67 (16%)

Query: 361  PELNGAAYRYPPGVVGVA---PTGIPAAVEGIVPSAMSLSHGLPP------VAHPPHAPS 411
            P L GA    PP + G     P  +P A  GI P       G+PP      V  PP  P 
Sbjct: 1056 PPLPGAGIPPPPPLPGAGIPPPPPLPGA--GIPPPPPLPGAGIPPPPPLPGVGIPPPPPL 1113

Query: 412  PGQTVKP 418
            PG  + P
Sbjct: 1114 PGAGIPP 1120


>gi|7662346 ADNP homeobox 2 [Homo sapiens]
          Length = 1131

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 372 PGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKP 418
           PGV+ V+P+  P  ++ + P  +S+S  +P    P    +P   + P
Sbjct: 416 PGVLPVSPSVTPGVLQAVSPGVLSVSRAVPSGVLPAGQMTPAGQMTP 462


>gi|24308352 DMRT-like family B with proline-rich C-terminal, 1
           [Homo sapiens]
          Length = 342

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 371 PPGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEADRDHASDQ 428
           PP +  + P  +P   + + P  +S  H LPP   PP   S   TV  + D+++  DQ
Sbjct: 268 PPPLPPLPP--LPPQPQFLPPGYLSALHFLPPPPPPPPPSSFSLTVLFDTDKENTDDQ 323


>gi|8567388 period 3 [Homo sapiens]
          Length = 1201

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 333  PDSLKN--CVNKDHLTAATHWASMDPAVVHPELNGAAYRYPPG--VVGVAPTGIPAAVEG 388
            PD ++   C   ++     + +   PA       G+  R  P         TG P     
Sbjct: 941  PDQMRRNTCPQTEYCVTGNNGSESSPATTGALSTGSPPRENPSHPTASALSTGSPPMKNP 1000

Query: 389  IVPSAMSLSHGLPPVAHPPH 408
              P+A +LS G PP+ +P H
Sbjct: 1001 SHPTASALSTGSPPMKNPSH 1020


>gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isoform
           b [Homo sapiens]
          Length = 1173

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 6/92 (6%)

Query: 193 DPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVN 252
           DP L   +E  L +QR+ TL  LL +   V  H      + ++       Q R+  F + 
Sbjct: 789 DPRLPTVLESEL-VQRIQTLSQLLLNLQAVIAH-----QDSYVETQRAAIQEREKQFRLQ 842

Query: 253 TARGGLVDEKALAQALKEGRIRGAALDVHESE 284
           + RG L+ E+   +  ++ R   AAL+  +S+
Sbjct: 843 STRGNLLLEQERQRNFEKQREERAALEKLQSQ 874


>gi|41327769 Rho/Rac guanine nucleotide exchange factor 18 isoform a
           [Homo sapiens]
          Length = 1015

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 6/92 (6%)

Query: 193 DPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVN 252
           DP L   +E  L +QR+ TL  LL +   V  H      + ++       Q R+  F + 
Sbjct: 631 DPRLPTVLESEL-VQRIQTLSQLLLNLQAVIAH-----QDSYVETQRAAIQEREKQFRLQ 684

Query: 253 TARGGLVDEKALAQALKEGRIRGAALDVHESE 284
           + RG L+ E+   +  ++ R   AAL+  +S+
Sbjct: 685 STRGNLLLEQERQRNFEKQREERAALEKLQSQ 716


>gi|23308751 3-hydroxyisobutyrate dehydrogenase [Homo sapiens]
          Length = 336

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 3/108 (2%)

Query: 166 LGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVE-RALGLQRVSTLQDLLFHSDCV-- 222
           +G IGLG +G  +A      G+ ++ YD +     E +  G Q VS+  D+   +D +  
Sbjct: 42  VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIIT 101

Query: 223 TLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKE 270
            L   +N    +   +  +K++++G+ L++++       K LA+ +++
Sbjct: 102 MLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEK 149


>gi|116325989 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 1 [Homo sapiens]
          Length = 890

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 16/86 (18%)

Query: 360 HPELNGAAYRYPPGVVGVAPTGIPAAVEGIVPSAMSL-----------SHGLPPVAHPPH 408
           HP +  +    P  V  V  TG+ A     VP  ++L           + G+PP   PP 
Sbjct: 805 HPTVGESLASIPQPVTAVPGTGLQAGGRSTVPQRVTLFRQMSSGAIPPNRGVPPAPPPPA 864

Query: 409 APSPGQT-----VKPEADRDHASDQL 429
           A  P ++       P+A++   +  L
Sbjct: 865 AALPRESSSVLNTDPDAEKPRFASNL 890


>gi|31542493 D site of albumin promoter (albumin D-box) binding
           protein [Homo sapiens]
          Length = 325

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/27 (51%), Positives = 15/27 (55%)

Query: 386 VEGIVPSAMSLSHGLPPVAHPPHAPSP 412
           VE +   A  L HGLPP   PP  PSP
Sbjct: 114 VEYVDLDAFLLEHGLPPSPPPPGGPSP 140


>gi|46370073 GRB2-associated binding protein 1 isoform b [Homo
           sapiens]
          Length = 694

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 20/75 (26%)

Query: 371 PPGVVGVAPTGIPAAVEGIVPS--AMSLSHGLPP----VAHPPHAPSPG----------- 413
           PPG    AP  +P A+    PS  A S S  LPP    +  PPH  + G           
Sbjct: 127 PPGSSLQAPADLPLAINTAPPSTQADSSSATLPPPYQLINVPPHLETLGIQEDPQDYLLL 186

Query: 414 ---QTVKPEADRDHA 425
              Q+ KPE  R HA
Sbjct: 187 INCQSKKPEPTRTHA 201


>gi|46370071 GRB2-associated binding protein 1 isoform a [Homo
           sapiens]
          Length = 724

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 20/75 (26%)

Query: 371 PPGVVGVAPTGIPAAVEGIVPS--AMSLSHGLPP----VAHPPHAPSPG----------- 413
           PPG    AP  +P A+    PS  A S S  LPP    +  PPH  + G           
Sbjct: 127 PPGSSLQAPADLPLAINTAPPSTQADSSSATLPPPYQLINVPPHLETLGIQEDPQDYLLL 186

Query: 414 ---QTVKPEADRDHA 425
              Q+ KPE  R HA
Sbjct: 187 INCQSKKPEPTRTHA 201


>gi|169168458 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 353

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)

Query: 369 RYPPGVVGVAPTGIP-AAVEGI-VPSAMSLSHG---LPPVAHPPHAPSPGQTVKP 418
           R PP  +   P+ +P  ++E +  PS++S S     L P+ HP H P P  T+ P
Sbjct: 165 RAPPAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRP-PASTLSP 218


>gi|239742749 PREDICTED: hypothetical protein XP_002342626 [Homo
           sapiens]
          Length = 277

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)

Query: 369 RYPPGVVGVAPTGIP-AAVEGI-VPSAMSLSHG---LPPVAHPPHAPSPGQTVKP 418
           R PP  +   P+ +P  ++E +  PS++S S     L P+ HP H P P  T+ P
Sbjct: 165 RAPPAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRP-PASTLSP 218


>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin c2 isoform a [Homo sapiens]
          Length = 1214

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 14/88 (15%)

Query: 332  IPDSLKNCVNKDHLTAATHWASMDPAVVHPELNGAAYRYPPGVVGVAPTGIPAAVEG-IV 390
            +P S+ N ++ + L A T   S  P  + P L  AA + P          I AAV+G ++
Sbjct: 1135 LPVSMANPLHPN-LPATTTMPSSLP--LGPGLGSAAAQSP---------AIVAAVQGNLL 1182

Query: 391  PSAMSLSHGLPPVAHPPHAPSPGQTVKP 418
            PSA  L     P+   P APSPG TV P
Sbjct: 1183 PSASPLPDPGTPLPPDPTAPSPG-TVTP 1209


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,825,529
Number of Sequences: 37866
Number of extensions: 777442
Number of successful extensions: 3142
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 3074
Number of HSP's gapped (non-prelim): 95
length of query: 429
length of database: 18,247,518
effective HSP length: 105
effective length of query: 324
effective length of database: 14,271,588
effective search space: 4623994512
effective search space used: 4623994512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.