LOC100293468 23458

Name: LOC100293468	Sequence: fasta or formatted (116aa)		NCBI GI: 239758027
Description: PREDICTED: similar to LIM and senescent cell antigen-like domains 1		Referenced in: LIM Domain Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 7 1 C cysteine 7.8 9 1 D aspartate 5.2 6 1 E glutamate 4.3 5 1 F phenylalanine 5.2 6 1 G glycine 6.9 8 1 H histidine 6.0 7 1 I isoleucine 7.8 9 2 K lysine 6.9 8 2 L leucine 11.2 13 2 M methionine 1.7 2 1 N asparagine 6.0 7 2 P proline 6.9 8 1 Q glutamine 3.4 4 1 R arginine 6.9 8 1 S serine 0.9 1 1 T threonine 0.0 0 0 V valine 2.6 3 1 W tryptophan 2.6 3 1 Y tyrosine 1.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to LIM and senescent cell antige... LOC100288695 0.772 PREDICTED: hypothetical protein XP_002342298 LIMS1 0.772 LIM and senescent cell antigen-like domains 1 LIMS2 0.654 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.654 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.654 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.654 LIM and senescent cell antigen-like domains 2 isofor... PXN 0.148 paxillin isoform 3 PXN 0.148 paxillin isoform 2 PXN 0.148 paxillin isoform 1 LPXN 0.148 leupaxin isoform 1 LPXN 0.148 leupaxin isoform 2 FBLIM1 0.135 filamin-binding LIM protein-1 isoform c FBLIM1 0.135 filamin-binding LIM protein-1 isoform b FBLIM1 0.135 filamin-binding LIM protein-1 isoform a FHL1 0.122 four and a half LIM domains 1 isoform 4 FHL1 0.122 four and a half LIM domains 1 isoform 2 FHL1 0.122 four and a half LIM domains 1 isoform 1 FHL1 0.122 four and a half LIM domains 1 isoform 2 FHL1 0.122 four and a half LIM domains 1 isoform 3 FHL1 0.122 four and a half LIM domains 1 isoform 5 FHL1 0.122 four and a half LIM domains 1 isoform 2 FHL3 0.122 four and a half LIM domains 3 TGFB1I1 0.122 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.122 transforming growth factor beta 1 induced transcript... LDB3 0.114 LIM domain binding 3 isoform 2 LDB3 0.114 LIM domain binding 3 isoform 1 FHL2 0.114 four and a half LIM domains 2 FHL2 0.114 four and a half LIM domains 2 FHL2 0.114 four and a half LIM domains 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.