LIMS3 6270

Name: LIMS3	Sequence: fasta or formatted (117aa)		NCBI GI: 15743548
Description: LIM and senescent cell antigen-like domains 3		Referenced in: LIM Domain Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.0 14 2 C cysteine 6.0 7 1 D aspartate 2.6 3 1 E glutamate 12.0 14 2 F phenylalanine 7.7 9 1 G glycine 5.1 6 2 H histidine 2.6 3 1 I isoleucine 3.4 4 2 K lysine 4.3 5 1 L leucine 4.3 5 1 M methionine 1.7 2 1 N asparagine 6.0 7 1 P proline 4.3 5 1 Q glutamine 4.3 5 2 R arginine 6.8 8 2 S serine 4.3 5 1 T threonine 4.3 5 1 V valine 5.1 6 1 W tryptophan 0.0 0 0 Y tyrosine 3.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM and senescent cell antigen-like domains 3 LOC100288695 0.973 PREDICTED: hypothetical protein XP_002342298 LIMS1 0.396 LIM and senescent cell antigen-like domains 1 LIMS2 0.311 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.311 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.311 LIM and senescent cell antigen-like domains 2 isofor... LIMS2 0.302 LIM and senescent cell antigen-like domains 2 isofo... ZYX 0.077 zyxin ZYX 0.077 zyxin TGFB1I1 0.063 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.063 transforming growth factor beta 1 induced transcript... PXN 0.059 paxillin isoform 3 PXN 0.059 paxillin isoform 2 PXN 0.059 paxillin isoform 1 LHX9 0.059 LIM homeobox 9 isoform 1 LHX9 0.059 LIM homeobox 9 isoform 2 ISL2 0.054 ISL LIM homeobox 2 LPXN 0.054 leupaxin isoform 1 LPXN 0.054 leupaxin isoform 2 LIMD1 0.054 LIM domains containing 1 LHX2 0.054 LIM homeobox protein 2 ISL1 0.050 islet-1 LMX1A 0.045 LIM homeobox transcription factor 1, alpha isoform a... FHL2 0.045 four and a half LIM domains 2 FHL2 0.045 four and a half LIM domains 2 FHL2 0.045 four and a half LIM domains 2 FHL2 0.045 four and a half LIM domains 2 ABLIM3 0.045 actin binding LIM protein family, member 3 LHX5 0.045 LIM homeobox protein 5 LMCD1 0.045 LIM and cysteine-rich domains 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.