Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 13489073
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13489073 egl nine homolog 1 [Homo sapiens]
(426 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13489073 egl nine homolog 1 [Homo sapiens] 895 0.0
gi|145701012 EGL nine (C.elegans) homolog 2 [Homo sapiens] 332 5e-91
gi|16604260 EGL nine (C.elegans) homolog 2 [Homo sapiens] 332 5e-91
gi|11545787 egl nine homolog 3 [Homo sapiens] 311 6e-85
gi|188035871 SET and MYND domain containing 2 [Homo sapiens] 48 1e-05
gi|38505161 tudor domain containing 1 [Homo sapiens] 45 1e-04
gi|239751388 PREDICTED: hypothetical protein XP_002347834 [Homo ... 45 1e-04
gi|239745895 PREDICTED: hypothetical protein XP_002343612 [Homo ... 45 1e-04
gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a... 44 2e-04
gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens] 44 3e-04
gi|239756892 PREDICTED: hypothetical protein [Homo sapiens] 44 4e-04
gi|28329422 acute myelogenous leukemia 1 translocation 1 protein... 42 8e-04
gi|28329419 acute myelogenous leukemia 1 translocation 1 protein... 42 8e-04
gi|28329416 acute myelogenous leukemia 1 translocation 1 protein... 42 8e-04
gi|4757916 acute myelogenous leukemia 1 translocation 1 protein ... 42 8e-04
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens] 42 8e-04
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens] 42 8e-04
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens] 42 8e-04
gi|21735594 programmed cell death 2 isoform 2 [Homo sapiens] 42 0.001
gi|21735592 programmed cell death 2 isoform 1 [Homo sapiens] 42 0.001
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 42 0.001
gi|38016945 deformed epidermal autoregulatory factor 1 [Homo sap... 41 0.002
gi|239749940 PREDICTED: similar to deformed epidermal autoregula... 41 0.002
gi|91208420 bassoon protein [Homo sapiens] 41 0.002
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 41 0.002
gi|67782303 zinc finger, MYND domain containing 17 [Homo sapiens] 41 0.002
gi|28872803 myeloid translocation gene on chromosome 16 isoform ... 40 0.003
gi|28872805 myeloid translocation gene on chromosome 16 isoform ... 40 0.003
gi|122937424 one cut homeobox 3 [Homo sapiens] 40 0.003
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 40 0.003
>gi|13489073 egl nine homolog 1 [Homo sapiens]
Length = 426
Score = 895 bits (2314), Expect = 0.0
Identities = 426/426 (100%), Positives = 426/426 (100%)
Query: 1 MANDSGGPGGPSPSERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVCQG 60
MANDSGGPGGPSPSERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVCQG
Sbjct: 1 MANDSGGPGGPSPSERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVCQG 60
Query: 61 SEGALGHGVGPHQHSGPAPPAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKPPADP 120
SEGALGHGVGPHQHSGPAPPAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKPPADP
Sbjct: 61 SEGALGHGVGPHQHSGPAPPAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKPPADP 120
Query: 121 AAAASPCRAAAGGQGSAVAAEAEPGKEEPPARSSLFQEKANLYPPSNTPGDALSPGGGLR 180
AAAASPCRAAAGGQGSAVAAEAEPGKEEPPARSSLFQEKANLYPPSNTPGDALSPGGGLR
Sbjct: 121 AAAASPCRAAAGGQGSAVAAEAEPGKEEPPARSSLFQEKANLYPPSNTPGDALSPGGGLR 180
Query: 181 PNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQL 240
PNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQL
Sbjct: 181 PNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQL 240
Query: 241 VSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMV 300
VSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMV
Sbjct: 241 VSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMV 300
Query: 301 ACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKF 360
ACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKF
Sbjct: 301 ACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKF 360
Query: 361 DRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDS 420
DRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDS
Sbjct: 361 DRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDS 420
Query: 421 VGKDVF 426
VGKDVF
Sbjct: 421 VGKDVF 426
>gi|145701012 EGL nine (C.elegans) homolog 2 [Homo sapiens]
Length = 407
Score = 332 bits (850), Expect = 5e-91
Identities = 185/373 (49%), Positives = 230/373 (61%), Gaps = 19/373 (5%)
Query: 60 GSEGALGHGVGPHQHSGPAPPAAVPPPRAGAREPRKAAAR------RDNASGDAAKGKVK 113
G E L + P H P A AG+ PR A RD G
Sbjct: 35 GVESYLPCPLLPSYHCPGVPSEA----SAGSGTPRATATSTTASPLRDGFGGQDGGELRP 90
Query: 114 AKPPADPAAAASPCR--AAAGGQGSAVAAE-AEPGKEEP-PARSSLFQEKANLYPPSNTP 169
+ A C+ AA G + A + AE G + P P++ +++
Sbjct: 91 LQSEGAAALVTKGCQRLAAQGARPEAPKRKWAEDGGDAPSPSKRPWARQENQEAEREGGM 150
Query: 170 GDALSPGGGLRPNG---QTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEV 226
+ S G G G + P +LAL+YIVPCM +GICV D FLG G ++ EV
Sbjct: 151 SCSCSSGSGEASAGLMEEALPSAPERLALDYIVPCMRYYGICVKDSFLGAALGGRVLAEV 210
Query: 227 RALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGK 286
AL G+ DGQLVSQ++ + IRGD+I W+EG EPGC +IG LM+ +D +IRHC G+
Sbjct: 211 EALKRGGRLRDGQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGR 270
Query: 287 LGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIF 346
LGSY INGRTKAMVACYPGNG GYVRHVDNP+GDGRC+TCIYYLN++WD KV GG+L+IF
Sbjct: 271 LGSYVINGRTKAMVACYPGNGLGYVRHVDNPHGDGRCITCIYYLNQNWDVKVHGGLLQIF 330
Query: 347 PEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKY--L 404
PEG+ A+IEP FDRLL FWSDRRNPHEV+PAYATRYAITVWYFDA ERA AK KY
Sbjct: 331 PEGRPVVANIEPLFDRLLIFWSDRRNPHEVKPAYATRYAITVWYFDAKERAAAKDKYQLA 390
Query: 405 TGEKGVRVELNKP 417
+G+KGV+V +++P
Sbjct: 391 SGQKGVQVPVSQP 403
>gi|16604260 EGL nine (C.elegans) homolog 2 [Homo sapiens]
Length = 407
Score = 332 bits (850), Expect = 5e-91
Identities = 185/373 (49%), Positives = 230/373 (61%), Gaps = 19/373 (5%)
Query: 60 GSEGALGHGVGPHQHSGPAPPAAVPPPRAGAREPRKAAAR------RDNASGDAAKGKVK 113
G E L + P H P A AG+ PR A RD G
Sbjct: 35 GVESYLPCPLLPSYHCPGVPSEA----SAGSGTPRATATSTTASPLRDGFGGQDGGELRP 90
Query: 114 AKPPADPAAAASPCR--AAAGGQGSAVAAE-AEPGKEEP-PARSSLFQEKANLYPPSNTP 169
+ A C+ AA G + A + AE G + P P++ +++
Sbjct: 91 LQSEGAAALVTKGCQRLAAQGARPEAPKRKWAEDGGDAPSPSKRPWARQENQEAEREGGM 150
Query: 170 GDALSPGGGLRPNG---QTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEV 226
+ S G G G + P +LAL+YIVPCM +GICV D FLG G ++ EV
Sbjct: 151 SCSCSSGSGEASAGLMEEALPSAPERLALDYIVPCMRYYGICVKDSFLGAALGGRVLAEV 210
Query: 227 RALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGK 286
AL G+ DGQLVSQ++ + IRGD+I W+EG EPGC +IG LM+ +D +IRHC G+
Sbjct: 211 EALKRGGRLRDGQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGR 270
Query: 287 LGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIF 346
LGSY INGRTKAMVACYPGNG GYVRHVDNP+GDGRC+TCIYYLN++WD KV GG+L+IF
Sbjct: 271 LGSYVINGRTKAMVACYPGNGLGYVRHVDNPHGDGRCITCIYYLNQNWDVKVHGGLLQIF 330
Query: 347 PEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKY--L 404
PEG+ A+IEP FDRLL FWSDRRNPHEV+PAYATRYAITVWYFDA ERA AK KY
Sbjct: 331 PEGRPVVANIEPLFDRLLIFWSDRRNPHEVKPAYATRYAITVWYFDAKERAAAKDKYQLA 390
Query: 405 TGEKGVRVELNKP 417
+G+KGV+V +++P
Sbjct: 391 SGQKGVQVPVSQP 403
>gi|11545787 egl nine homolog 3 [Homo sapiens]
Length = 239
Score = 311 bits (798), Expect = 6e-85
Identities = 144/224 (64%), Positives = 174/224 (77%), Gaps = 1/224 (0%)
Query: 181 PNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQL 240
P G L K+ALEYIVPC+++ G C +D+FLG+ G + + V+ LH TG DGQL
Sbjct: 2 PLGHIMRLDLEKIALEYIVPCLHEVGFCYLDNFLGEVVGDCVLERVKQLHCTGALRDGQL 61
Query: 241 VSQKSDSSK-DIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAM 299
++ SK +RGD+ITWI G E GCE I L+S +D L+ +C +LG Y + R+KAM
Sbjct: 62 AGPRAGVSKRHLRGDQITWIGGNEEGCEAISFLLSLIDRLVLYCGSRLGKYYVKERSKAM 121
Query: 300 VACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPK 359
VACYPGNGTGYVRHVDNPNGDGRC+TCIYYLNK+WDAK+ GGILRIFPEGK+ AD+EP
Sbjct: 122 VACYPGNGTGYVRHVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPI 181
Query: 360 FDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKY 403
FDRLLFFWSDRRNPHEVQP+YATRYA+TVWYFDA+ERA AK K+
Sbjct: 182 FDRLLFFWSDRRNPHEVQPSYATRYAMTVWYFDAEERAEAKKKF 225
>gi|188035871 SET and MYND domain containing 2 [Homo sapiens]
Length = 433
Score = 48.1 bits (113), Expect = 1e-05
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 20 YCELC-GKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC 58
+CE C + E L +C RC+ +FYC E Q++DW HKL C
Sbjct: 51 HCEYCFTRKEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
>gi|38505161 tudor domain containing 1 [Homo sapiens]
Length = 1189
Score = 45.4 bits (106), Expect = 1e-04
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 CELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVCQ 59
C CG +L RCS+C+ ++YC QR+DW H +VC+
Sbjct: 170 CHRCGLFGSL-RCSQCKQTYYCSTACQRRDWSAHSIVCR 207
>gi|239751388 PREDICTED: hypothetical protein XP_002347834 [Homo
sapiens]
Length = 404
Score = 45.1 bits (105), Expect = 1e-04
Identities = 44/167 (26%), Positives = 62/167 (37%), Gaps = 15/167 (8%)
Query: 54 HKLVCQGSEGAL--GHGVGPHQHSGPAPPAAVPPPRAGAREPRKAAARRDNAS------- 104
H + G EGAL GHG + GP AA+ RAGA + RR A
Sbjct: 232 HAVRLDGDEGALQVGHGPAGRELEGPGGGAALGEQRAGATTTPGSRRRRRGAGRSAGWPH 291
Query: 105 -GDAAKGKVKAKPPADPAAAASPCRAAAGGQGSAVAAEAEP--GKEEPPARSSL---FQE 158
G ++ + PPA P AA C AG + E +P G + +S +
Sbjct: 292 PGGPSRPTRRNAPPARPDAAGEQCPRPAGARPRQAEIETDPETGSDSFSTWTSYEFNYAR 351
Query: 159 KANLYPPSNTPGDALSPGGGLRPNGQTKPLPALKLALEYIVPCMNKH 205
+ P +T D S + T+P P L+ + C H
Sbjct: 352 PKSHSSPLSTSRDPKSSYTHTHTHTHTEPAPVLEFSTPVKAICCFHH 398
>gi|239745895 PREDICTED: hypothetical protein XP_002343612 [Homo
sapiens]
Length = 404
Score = 45.1 bits (105), Expect = 1e-04
Identities = 44/167 (26%), Positives = 62/167 (37%), Gaps = 15/167 (8%)
Query: 54 HKLVCQGSEGAL--GHGVGPHQHSGPAPPAAVPPPRAGAREPRKAAARRDNAS------- 104
H + G EGAL GHG + GP AA+ RAGA + RR A
Sbjct: 232 HAVRLDGDEGALQVGHGPAGRELEGPGGGAALGEQRAGATTTPGSRRRRRGAGRSAGWPH 291
Query: 105 -GDAAKGKVKAKPPADPAAAASPCRAAAGGQGSAVAAEAEP--GKEEPPARSSL---FQE 158
G ++ + PPA P AA C AG + E +P G + +S +
Sbjct: 292 PGGPSRPTRRNAPPARPDAAGEQCPRPAGARPRQAEIETDPETGSDSFSTWTSYEFNYAR 351
Query: 159 KANLYPPSNTPGDALSPGGGLRPNGQTKPLPALKLALEYIVPCMNKH 205
+ P +T D S + T+P P L+ + C H
Sbjct: 352 PKSHSSPLSTSRDPKSSYTHTHTHTHTEPAPVLEFSTPVKAICCFHH 398
>gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a
[Homo sapiens]
Length = 410
Score = 44.3 bits (103), Expect = 2e-04
Identities = 44/133 (33%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 79 PPAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKPPADPAAAASPCRAA----AGGQ 134
PPAA+P P A P A R + KA P A+ AA CRA A G+
Sbjct: 254 PPAALPAPLTEAAPPAPPA--RPPPGPGPSSAPAKASPEAEEAARCVHCRALFRRRADGR 311
Query: 135 GSAVAAEAEPGKEEPPARSSLFQEKANLYP-PSNTPGDALSP----GGGLRPNGQTKPLP 189
G A +PG+ S L+ ++ LY S+ GD P G RP + L
Sbjct: 312 GGRCAEAPDPGRLLVRRLSCLWCAESLLYHCLSDAEGDFSDPCACEPGHPRPAARWAALA 371
Query: 190 ALKLALEYIVPCM 202
AL LA VPC+
Sbjct: 372 ALSLA----VPCL 380
>gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens]
Length = 440
Score = 43.9 bits (102), Expect = 3e-04
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 17 DRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC 58
+R C C E RCSRC++ +YCC+E Q + W+KH C
Sbjct: 390 ERPRCAYCSA-EASKRCSRCQNEWYCCRECQVKHWEKHGKTC 430
>gi|239756892 PREDICTED: hypothetical protein [Homo sapiens]
Length = 576
Score = 43.5 bits (101), Expect = 4e-04
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
Query: 54 HKLVCQGSEGAL--GHGVGPHQHSGPAPPAAVPPPRAGAREPRKAAARRDNAS------- 104
H + G EGAL GHG + GP AA+ RAGA + RR A
Sbjct: 232 HAVRLDGDEGALQVGHGPAGRELEGPGGGAALGEQRAGATTTPGSRRRRRGAGRSAGWPH 291
Query: 105 -GDAAKGKVKAKPPADPAAAASPCRAAAGGQGSAVAAEAEP 144
G ++ + PPA P AA C AG + E +P
Sbjct: 292 PGGPSRPTRRNAPPARPDAAGEQCPRPAGARPRQAEIETDP 332
>gi|28329422 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 42.4 bits (98), Expect = 8e-04
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 15 ERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC--------QGSEGALG 66
E + C CG+ + CS C ++ YC Q +DW+KH +C QG A+
Sbjct: 472 EDSSESCWNCGRKASET-CSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVS 530
Query: 67 HGVGPHQHSG---PAPPAAVP 84
V P+ +G PPAA P
Sbjct: 531 SSVTPNSGAGSPMDTPPAATP 551
>gi|28329419 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 42.4 bits (98), Expect = 8e-04
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 15 ERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC--------QGSEGALG 66
E + C CG+ + CS C ++ YC Q +DW+KH +C QG A+
Sbjct: 472 EDSSESCWNCGRKASET-CSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVS 530
Query: 67 HGVGPHQHSG---PAPPAAVP 84
V P+ +G PPAA P
Sbjct: 531 SSVTPNSGAGSPMDTPPAATP 551
>gi|28329416 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8b [Homo sapiens]
Length = 604
Score = 42.4 bits (98), Expect = 8e-04
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 15 ERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC--------QGSEGALG 66
E + C CG+ + CS C ++ YC Q +DW+KH +C QG A+
Sbjct: 509 EDSSESCWNCGRKASET-CSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVS 567
Query: 67 HGVGPHQHSG---PAPPAAVP 84
V P+ +G PPAA P
Sbjct: 568 SSVTPNSGAGSPMDTPPAATP 588
>gi|4757916 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8a [Homo sapiens]
Length = 577
Score = 42.4 bits (98), Expect = 8e-04
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 15 ERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC--------QGSEGALG 66
E + C CG+ + CS C ++ YC Q +DW+KH +C QG A+
Sbjct: 482 EDSSESCWNCGRKASET-CSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVS 540
Query: 67 HGVGPHQHSG---PAPPAAVP 84
V P+ +G PPAA P
Sbjct: 541 SSVTPNSGAGSPMDTPPAATP 561
>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 42.4 bits (98), Expect = 8e-04
Identities = 43/154 (27%), Positives = 56/154 (36%), Gaps = 14/154 (9%)
Query: 37 RSSFYCCKEHQRQDWKKH--KLVCQGSEGAL--GHGVGPHQHSGPAPPAAVPPPR---AG 89
R+ E + DW++ +C +E L H G Q S P P A P+ G
Sbjct: 13 RARLRTLSEARPGDWERRAGSSLCGSAEALLLSPHVTGAAQRS-PTPGRARAAPQQGDGG 71
Query: 90 AREPRKAAARRDNASGDAAKGKVKAKPPADPAAAASPCRAA-----AGGQGSAVAAEAEP 144
AR R AA S + + DPA A P AG +GS A + P
Sbjct: 72 ARRERAAAESLGTQSATLGPRRGGLRSRTDPAFGAGPLPLVSRLGHAGERGSPGAGDVNP 131
Query: 145 -GKEEPPARSSLFQEKANLYPPSNTPGDALSPGG 177
PP R ++PP T SPGG
Sbjct: 132 VSASSPPGRPDPLLLTTFVFPPGKTSAPRPSPGG 165
>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 42.4 bits (98), Expect = 8e-04
Identities = 43/154 (27%), Positives = 56/154 (36%), Gaps = 14/154 (9%)
Query: 37 RSSFYCCKEHQRQDWKKH--KLVCQGSEGAL--GHGVGPHQHSGPAPPAAVPPPR---AG 89
R+ E + DW++ +C +E L H G Q S P P A P+ G
Sbjct: 13 RARLRTLSEARPGDWERRAGSSLCGSAEALLLSPHVTGAAQRS-PTPGRARAAPQQGDGG 71
Query: 90 AREPRKAAARRDNASGDAAKGKVKAKPPADPAAAASPCRAA-----AGGQGSAVAAEAEP 144
AR R AA S + + DPA A P AG +GS A + P
Sbjct: 72 ARRERAAAESLGTQSATLGPRRGGLRSRTDPAFGAGPLPLVSRLGHAGERGSPGAGDVNP 131
Query: 145 -GKEEPPARSSLFQEKANLYPPSNTPGDALSPGG 177
PP R ++PP T SPGG
Sbjct: 132 VSASSPPGRPDPLLLTTFVFPPGKTSAPRPSPGG 165
>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 42.4 bits (98), Expect = 8e-04
Identities = 43/154 (27%), Positives = 56/154 (36%), Gaps = 14/154 (9%)
Query: 37 RSSFYCCKEHQRQDWKKH--KLVCQGSEGAL--GHGVGPHQHSGPAPPAAVPPPR---AG 89
R+ E + DW++ +C +E L H G Q S P P A P+ G
Sbjct: 13 RARLRTLSEARPGDWERRAGSSLCGSAEALLLSPHVTGAAQRS-PTPGRARAAPQQGDGG 71
Query: 90 AREPRKAAARRDNASGDAAKGKVKAKPPADPAAAASPCRAA-----AGGQGSAVAAEAEP 144
AR R AA S + + DPA A P AG +GS A + P
Sbjct: 72 ARRERAAAESLGTQSATLGPRRGGLRSRTDPAFGAGPLPLVSRLGHAGERGSPGAGDVNP 131
Query: 145 -GKEEPPARSSLFQEKANLYPPSNTPGDALSPGG 177
PP R ++PP T SPGG
Sbjct: 132 VSASSPPGRPDPLLLTTFVFPPGKTSAPRPSPGG 165
>gi|21735594 programmed cell death 2 isoform 2 [Homo sapiens]
Length = 228
Score = 42.0 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 21 CELCGKMENLLRCSRCRSSFYCCKEHQRQDWK-KHKLVC 58
C +CG + CSRC ++YC KEHQ DW+ HK C
Sbjct: 135 CRVCGCL-GPKTCSRCHKAYYCSKEHQTLDWRLGHKQAC 172
>gi|21735592 programmed cell death 2 isoform 1 [Homo sapiens]
Length = 344
Score = 42.0 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 21 CELCGKMENLLRCSRCRSSFYCCKEHQRQDWK-KHKLVC 58
C +CG + CSRC ++YC KEHQ DW+ HK C
Sbjct: 135 CRVCGCL-GPKTCSRCHKAYYCSKEHQTLDWRLGHKQAC 172
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 41.6 bits (96), Expect = 0.001
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 71 PHQHSGPAPPAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKPPADPAAAASPCRAA 130
P S PAPP AVP P A+A + A+ P AA+P +
Sbjct: 512 PAAPSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVS 571
Query: 131 AGGQGSAVAA---EAEPGKEEPPARSSLFQEKANLYPPSNTPGDALSP-GGGLRPNGQ 184
GG S+ ++ EA P + + P++ + + PP+ P + P G G+ P Q
Sbjct: 572 GGGSTSSTSSGSFEASPVEPQLPSKEGP-EPPEEVPPPTTPPVPKVEPKGDGIGPTRQ 628
Score = 29.6 bits (65), Expect = 5.5
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Query: 110 GKVKAKPPADPAAAASPCRAAAGGQGSAVAAEAEPGKEEPPARSSLFQEKANLYPPSNTP 169
G V PA+P SP R AA + +E P PP +S +P + P
Sbjct: 793 GDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLASY-----PGFPENGAP 847
Query: 170 GDALSPGGGLRPNGQTKPLP 189
G +S P + P P
Sbjct: 848 GPPISRFPLEEPGPRPLPWP 867
>gi|38016945 deformed epidermal autoregulatory factor 1 [Homo
sapiens]
Length = 565
Score = 41.2 bits (95), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 14 SERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC 58
+ER Q C CG+ E + C+ C YC QR+DWK H+ +C
Sbjct: 497 AERKEQSCVNCGR-EAMSECTGCHKVNYCSTFCQRKDWKDHQHIC 540
>gi|239749940 PREDICTED: similar to deformed epidermal
autoregulatory factor 1 [Homo sapiens]
Length = 426
Score = 41.2 bits (95), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 14 SERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC 58
+ER Q C CG+ E + C+ C YC QR+DWK H+ +C
Sbjct: 358 AERKEQSCVNCGR-EAMSECTGCHKVNYCSTFCQRKDWKDHQHIC 401
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 41.2 bits (95), Expect = 0.002
Identities = 48/172 (27%), Positives = 68/172 (39%), Gaps = 13/172 (7%)
Query: 80 PAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKPPADPAAA-ASPCRAAAGGQGSAV 138
P +PPP + + P A R S KG P+ P A ASP A S
Sbjct: 528 PTPLPPPTS-QQPPVGAPHRASGTSPLKQKGPQGLGQPSGPLPAKASPLSTKASPLPSKA 586
Query: 139 AAEAEPGKEEPPARS-SLFQEKANLYP------PSNTPGDALSPGGGLRPNGQTKPLPAL 191
+ +A+P + P+++ S QEK P P P +P +G + PA
Sbjct: 587 SPQAKPLRASEPSKTPSSVQEKKTRVPTKAEPMPKPPPETTPTPATPKVKSGVRRAEPAT 646
Query: 192 KLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQ 243
+ VP K G +D +GK Q ++L DTG +DG SQ
Sbjct: 647 PVVKA--VPEAPKGG--EAEDLVGKPYSQDASRSPQSLSDTGYSSDGISSSQ 694
Score = 30.4 bits (67), Expect = 3.2
Identities = 42/152 (27%), Positives = 48/152 (31%), Gaps = 28/152 (18%)
Query: 68 GVGPHQHSGPAPPAAVPP--PRAGAREPRKAAARRDNASGDAAKGKVKAKPPA------- 118
G GP GP P A PP P G + P AAR G P
Sbjct: 20 GAGPGPGPGPGPGAGKPPSAPAGGGQLPAAGAARSTAVPPVPGPGPGPGPGPGPGSTSRR 79
Query: 119 -DPAAAASPCRAAAGGQGSAVAAEAEPGKEEP-------PARSSLFQEKANLYPPSNTP- 169
DP RAA+ A A PG E P PA + L S T
Sbjct: 80 LDPKEPLGNQRAASPTPKQASA--TTPGHESPRETRAQGPAGQEADGPRRTLQVDSRTQR 137
Query: 170 ---GDALSPGGGLRPNG-----QTKPLPALKL 193
++SP G P Q PLP+ L
Sbjct: 138 SGRSPSVSPDRGSTPTSPYSVPQIAPLPSSTL 169
Score = 30.0 bits (66), Expect = 4.2
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 11/92 (11%)
Query: 59 QGSEGALGHGVGPHQHSGPAPPAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAK-PP 117
+GS A G Q P P A P AG PR A + N S AK + + P
Sbjct: 3808 RGSAPAASQPAGKPQ---PGPSTATGPQPAG--PPR---AEQTNGSKGTAKAPQQGRAPQ 3859
Query: 118 ADPAAAASPCRAAAGGQ--GSAVAAEAEPGKE 147
A PA P AG + G+ A +PG +
Sbjct: 3860 AQPAPGPGPAGVKAGARPGGTPGAPAGQPGAD 3891
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 40.8 bits (94), Expect = 0.002
Identities = 32/98 (32%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Query: 78 APPAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKPPADPAAAASPCRAAAGGQGSA 137
A PAAV PP AG AA A AA + P A PAA + R A G +A
Sbjct: 100 AAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAA 159
Query: 138 VAAEAEPGKEEPPARSSLFQEKANLYPPSNTPGDALSP 175
A P +P A S P + +P A++P
Sbjct: 160 ALAAVYPAAADPSAASLCAASPLAAVPAAASPA-AVAP 196
Score = 31.6 bits (70), Expect = 1.4
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 15/82 (18%)
Query: 78 APPAAVP-------------PPRAGAREPRKAAARRDNASGDAAKGKVKAKPPADPAAA- 123
+PPAAVP PP A AAA AS AA A PAA
Sbjct: 136 SPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVA 195
Query: 124 -ASPCRAAAGGQGSAVAAEAEP 144
A+ C AAG +++ A ++P
Sbjct: 196 PAAVCPGAAGPSAASLCAASQP 217
Score = 31.2 bits (69), Expect = 1.9
Identities = 35/118 (29%), Positives = 42/118 (35%), Gaps = 7/118 (5%)
Query: 75 SGP--APPAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKPPADPAAAASPCRAAAG 132
+GP A PAAV P A AA A A V+ PAAA + AA
Sbjct: 110 AGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAA 169
Query: 133 GQGSAVAAEAEPGKEEPPARSSLFQEKANLYPPSNTPGDALSPGGGLRPNGQTKPLPA 190
+A A P P A S A + P + PG A L Q +PA
Sbjct: 170 DPSAASLCAASPLAAVPAAAS-----PAAVAPAAVCPGAAGPSAASLCAASQPAAVPA 222
Score = 30.0 bits (66), Expect = 4.2
Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 80 PAAVPPP--RAGAREPRKA-AARRDNASGDAAKGKVKAKPPA-DPAAAASPCRAAAGGQG 135
P VP RA A P A AA R A+G A P A DP+AA+ +
Sbjct: 83 PVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVP 142
Query: 136 SAVAAEAEPGKEEPPARSSLFQEKANLYPPSNTPGDA 172
+AV A P PPA + A +YP + P A
Sbjct: 143 AAVPAAVRPPAAGPPAAA-----LAAVYPAAADPSAA 174
Score = 30.0 bits (66), Expect = 4.2
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 80 PAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKPPADPAAAASPCRAAAGGQGSAVA 139
PAAV P AG AA + A AA A +PAAAA RAAA + V
Sbjct: 196 PAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAA---RAAAAPAAACVQ 252
Query: 140 AEAEPGKEEPPARSSLFQEKANLYPPSNTP 169
+ A E P ++ Q + +PP+ P
Sbjct: 253 SVA----ESPATPLAIAQPVS--FPPAPVP 276
Score = 29.6 bits (65), Expect = 5.5
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 57 VCQGSEGALGHGVGPHQHSGPAPPAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKP 116
VC G+ G + A PAA P A AAA R A+ AA + A+
Sbjct: 199 VCPGAAGPSAASLCAASQPA-AVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAES 257
Query: 117 PADPAAAASP 126
PA P A A P
Sbjct: 258 PATPLAIAQP 267
Score = 29.3 bits (64), Expect = 7.1
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Query: 78 APPAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKPPADPAAAASPCRAAAGGQGSA 137
A PAAV P AA A+G +A A PA AAASP AA A
Sbjct: 189 ASPAAVAP-----------AAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPA 237
Query: 138 VAAEA 142
AA A
Sbjct: 238 AAARA 242
>gi|67782303 zinc finger, MYND domain containing 17 [Homo sapiens]
Length = 460
Score = 40.8 bits (94), Expect = 0.002
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 30 LLRCSRCRSSFYCCKEHQRQDWKKHKLVCQ 59
L C RCR+ +YC E Q+ DW H+ VCQ
Sbjct: 121 LRHCKRCRNVYYCGPECQKSDWPAHRRVCQ 150
>gi|28872803 myeloid translocation gene on chromosome 16 isoform
MTG16a [Homo sapiens]
Length = 653
Score = 40.4 bits (93), Expect = 0.003
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 15 ERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC----QGSEGALGHGV- 69
E + C CG+ + CS C ++ YC Q +DW+KH VC QG + V
Sbjct: 550 EDSSESCWNCGRKASET-CSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVP 608
Query: 70 GPHQ--HS-GPA-PPAAVPPPRAGAREPRK 95
GP + HS GP+ P A P AG+ P +
Sbjct: 609 GPPEAAHSLGPSLPVGAASPSEAGSAGPSR 638
>gi|28872805 myeloid translocation gene on chromosome 16 isoform
MTG16b [Homo sapiens]
Length = 567
Score = 40.4 bits (93), Expect = 0.003
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 15 ERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC----QGSEGALGHGV- 69
E + C CG+ + CS C ++ YC Q +DW+KH VC QG + V
Sbjct: 464 EDSSESCWNCGRKASET-CSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVP 522
Query: 70 GPHQ--HS-GPA-PPAAVPPPRAGAREPRK 95
GP + HS GP+ P A P AG+ P +
Sbjct: 523 GPPEAAHSLGPSLPVGAASPSEAGSAGPSR 552
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 40.4 bits (93), Expect = 0.003
Identities = 31/118 (26%), Positives = 41/118 (34%), Gaps = 8/118 (6%)
Query: 67 HGVGPHQHSGPA--PPAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKPPADPAAAA 124
HG PH H PA PP PP R A RD + A+ G + + A
Sbjct: 137 HGGHPHAHPHPAAAPPPPPPPQRLAASVSGSFTLMRDERAALASVGHLYGPYGKELPAMG 196
Query: 125 SPCRAAAGGQGSAVAAEAEPGKEEPPARSSLFQEKANLYPPSNTPGDALSPGGGLRPN 182
SP A+ +P PP + + PP + GD L P P+
Sbjct: 197 SPLSPLPNALPPALHGAPQPPPPPPPPPLAAYG------PPGHLAGDKLLPPAAFEPH 248
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 40.4 bits (93), Expect = 0.003
Identities = 38/105 (36%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 81 AAVPPPRAGAREPRKAAARRDN-ASGDAAKGKVKAKPPADPA--AAASPCRAAAGGQGSA 137
A V PPR GA P A R A+ AA PP PA AAA+P RA +A
Sbjct: 97 ARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAA-AAA 155
Query: 138 VAAEAEPGKEEPPARSSLFQEKANLY--PPSNTPGDALSPGGGLR 180
A PG +P R+ Q A L PP+ A++P G R
Sbjct: 156 ATAPPSPGPAQPGPRA---QRAAPLAAPPPAPAAPPAVAPPAGPR 197
Score = 39.3 bits (90), Expect = 0.007
Identities = 45/155 (29%), Positives = 62/155 (40%), Gaps = 27/155 (17%)
Query: 59 QGSEGALGHGVGPHQHSGPAPPAAVPPPRAGAREPRKAAARRDNASGDAAKGKVKAKPPA 118
+G+ A P + P PPA V A AR PR AAA A+ + G + P A
Sbjct: 116 RGAPAAAAAAAPPPTPAPPPPPAPVAAA-APARAPRAAAAA---ATAPPSPGPAQPGPRA 171
Query: 119 D---PAAAASPCRAAAGGQGSAVAAEAEPGKEEPPARSSLFQEKANLYPPSNTPGDALS- 174
P AA P AA AVA A P + PPA ++ + L PP P
Sbjct: 172 QRAAPLAAPPPAPAAP----PAVAPPAGPRRAPPPAVAA---REPPLPPPPQPPAPPQQQ 224
Query: 175 -----------PGGGLRPNGQTKPLPALKLALEYI 198
GG +R G +P+ +L+ + Y+
Sbjct: 225 QPPPPQPQPPPEGGAVRAGGAARPV-SLREVVRYL 258
Score = 34.3 bits (77), Expect = 0.22
Identities = 42/170 (24%), Positives = 58/170 (34%), Gaps = 45/170 (26%)
Query: 71 PHQHSGPAPPAAVPPPRAGA------------REPRKAAARRDNASGDAAKGKVK----- 113
P Q P PP PPP GA RE + A G +G+V+
Sbjct: 220 PPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEE 279
Query: 114 ----------------AKPPAD------PAAAASPCRAAAGGQGSAVAAEAEPGKEEPPA 151
A P D PAA+A P R+ GG+ + E E +E
Sbjct: 280 EAAARGRLERTRLGALALPRGDRPGRAPPAASARPSRSKRGGEERVLEKEEEEDDDEDED 339
Query: 152 RSSLFQEKANLYPPSNTPGDALSPGGGLRPNGQTKPLPALKLALEYIVPC 201
E + + P S+ P A + NG+ P A + E+ PC
Sbjct: 340 EEDDVSEGSEV-PESDRPAGAQHH----QLNGERGPQSAKERVKEW-TPC 383
Score = 29.3 bits (64), Expect = 7.1
Identities = 26/107 (24%), Positives = 35/107 (32%), Gaps = 10/107 (9%)
Query: 94 RKAAARRDNASGDAAKGKVKAKPPADPAAAASPCRAAAGGQGSAVAAEAEPGKEEP---- 149
++A R + + + +PP A +P RA G +A AA P P
Sbjct: 79 QRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPA 138
Query: 150 ------PARSSLFQEKANLYPPSNTPGDALSPGGGLRPNGQTKPLPA 190
PAR+ A PPS P P P PA
Sbjct: 139 PVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPA 185
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,919,113
Number of Sequences: 37866
Number of extensions: 1158115
Number of successful extensions: 10112
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 849
Number of HSP's that attempted gapping in prelim test: 7976
Number of HSP's gapped (non-prelim): 2630
length of query: 426
length of database: 18,247,518
effective HSP length: 105
effective length of query: 321
effective length of database: 14,271,588
effective search space: 4581179748
effective search space used: 4581179748
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.