Guide to the Human Genome
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Name: SATL1 Sequence: fasta or formatted (445aa) NCBI GI: 61175248
Description:

spermidine/spermine N1-acetyl transferase-like 1

Referenced in:

Urea Cycle, Nitric Oxide, and Polyamines

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         16           2
 C cysteine            0.9          4           1
 D aspartate           4.5         20           1
 E glutamate           2.5         11           1
 F phenylalanine       1.3          6           1
 G glycine             9.9         44           2
 H histidine           1.1          5           2
 I isoleucine          2.9         13           2
 K lysine              2.0          9           1
 L leucine             6.5         29           2
 M methionine          6.7         30           1
 N asparagine          3.6         16           1
 P proline            10.3         46           2
 Q glutamine          15.1         67           2
 R arginine            3.6         16           1
 S serine             13.5         60           2
 T threonine           4.3         19           1
 V valine              3.4         15           1
 W tryptophan          2.2         10           1
 Y tyrosine            2.0          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spermidine/spermine N1-acetyl transferase-like 1 [Ho... 
QRICH2                0.155   glutamine rich 2 
SAT1                  0.101   diamine N-acetyltransferase 1 
PCLO                  0.087   piccolo isoform 2 
PCLO                  0.087   piccolo isoform 1 
SAT2                  0.080   diamine N-acetyltransferase 2 
ARID1A                0.041   AT rich interactive domain 1A isoform a 
ARID1A                0.041   AT rich interactive domain 1A isoform b 
CREBBP                0.041   CREB binding protein isoform b 
CREBBP                0.041   CREB binding protein isoform a 
ARID1B                0.036   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
SS18                  0.032   synovial sarcoma translocation, chromosome 18 isofor...
WNK1                  0.032   WNK lysine deficient protein kinase 1 
ARID1B                0.029   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.029   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
SS18                  0.028   synovial sarcoma translocation, chromosome 18 isofor...
EP300                 0.028   E1A binding protein p300 
BPTF                  0.028   bromodomain PHD finger transcription factor isoform ...
MED15                 0.027   mediator complex subunit 15 isoform b 
UMODL1                0.026   uromodulin-like 1 isoform 2 precursor 
NFRKB                 0.025   nuclear factor related to kappaB binding protein is...
NFRKB                 0.025   nuclear factor related to kappaB binding protein iso...
PRB2                  0.025   proline-rich protein BstNI subfamily 2 
SYN1                  0.023   synapsin I isoform Ia 
SYN1                  0.023   synapsin I isoform Ib 
BPTF                  0.023   bromodomain PHD finger transcription factor isoform ...
SF3B4                 0.022   splicing factor 3b, subunit 4 
TCF20                 0.022   transcription factor 20 isoform 2 
TCF20                 0.022   transcription factor 20 isoform 1 
APC                   0.022   adenomatous polyposis coli 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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