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Search of human proteins with 60498997
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|60498997 gastrin-releasing peptide isoform 2 preproprotein
[Homo sapiens]
(141 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|60498997 gastrin-releasing peptide isoform 2 preproprotein [H... 290 4e-79
gi|31542860 gastrin-releasing peptide isoform 1 preproprotein [H... 283 4e-77
gi|60498999 gastrin-releasing peptide isoform 3 preproprotein [H... 250 3e-67
gi|45505145 neuromedin B isoform 2 [Homo sapiens] 38 0.002
gi|45505143 neuromedin B isoform 1 [Homo sapiens] 38 0.002
gi|5454102 transforming, acidic coiled-coil containing protein 3... 37 0.007
gi|9910430 matrix, extracellular phosphoglycoprotein with ASARM ... 35 0.016
gi|31083156 interleukin 20 receptor, alpha [Homo sapiens] 31 0.39
gi|154350224 hypothetical protein LOC84923 isoform 2 [Homo sapiens] 30 0.66
gi|239582720 ATG9 autophagy related 9 homolog B [Homo sapiens] 30 0.86
gi|124378039 SEC16 homolog A [Homo sapiens] 30 0.86
gi|45387958 1A6/DRIM (down-regulated in metastasis) interacting ... 29 1.1
gi|157384971 cyclin G associated kinase [Homo sapiens] 29 1.5
gi|169212085 PREDICTED: similar to poly(A) binding protein inter... 28 1.9
gi|239752553 PREDICTED: similar to poly(A) binding protein inter... 28 1.9
gi|89041275 PREDICTED: similar to poly(A) binding protein intera... 28 1.9
gi|17511255 poly(A) binding protein interacting protein 1 isofor... 28 1.9
gi|118498337 HECT domain containing 1 [Homo sapiens] 28 1.9
gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens] 28 2.5
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 28 2.5
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens] 28 2.5
gi|109948292 hypothetical protein LOC57614 [Homo sapiens] 28 2.5
gi|239756547 PREDICTED: hypothetical protein [Homo sapiens] 28 3.3
gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens] 28 3.3
gi|156564407 phospholipase D2 [Homo sapiens] 27 4.3
gi|26051216 calcium/calmodulin-dependent protein kinase II beta ... 27 4.3
gi|21361535 lethal, Chr 7, Rinchik 6 [Homo sapiens] 27 4.3
gi|4503627 coagulation factor XI precursor [Homo sapiens] 27 5.6
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 27 7.3
gi|228008333 rhophilin, Rho GTPase binding protein 2 [Homo sapiens] 27 7.3
>gi|60498997 gastrin-releasing peptide isoform 2 preproprotein [Homo
sapiens]
Length = 141
Score = 290 bits (741), Expect = 4e-79
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MRGRELPLVLLALVLCLAPRGRAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSS 60
MRGRELPLVLLALVLCLAPRGRAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSS
Sbjct: 1 MRGRELPLVLLALVLCLAPRGRAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSS 60
Query: 61 VSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQQPSWDSEDSSNFK 120
VSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQQPSWDSEDSSNFK
Sbjct: 61 VSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQQPSWDSEDSSNFK 120
Query: 121 DVGSKGKGSQREGRNPQLNQQ 141
DVGSKGKGSQREGRNPQLNQQ
Sbjct: 121 DVGSKGKGSQREGRNPQLNQQ 141
>gi|31542860 gastrin-releasing peptide isoform 1 preproprotein [Homo
sapiens]
Length = 148
Score = 283 bits (723), Expect = 4e-77
Identities = 141/148 (95%), Positives = 141/148 (95%), Gaps = 7/148 (4%)
Query: 1 MRGRELPLVLLALVLCLAPRGRAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSS 60
MRGRELPLVLLALVLCLAPRGRAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSS
Sbjct: 1 MRGRELPLVLLALVLCLAPRGRAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSS 60
Query: 61 VSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQQPSWDSEDSSNFK 120
VSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQQPSWDSEDSSNFK
Sbjct: 61 VSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQQPSWDSEDSSNFK 120
Query: 121 DVGSKGK-------GSQREGRNPQLNQQ 141
DVGSKGK GSQREGRNPQLNQQ
Sbjct: 121 DVGSKGKVGRLSAPGSQREGRNPQLNQQ 148
>gi|60498999 gastrin-releasing peptide isoform 3 preproprotein [Homo
sapiens]
Length = 138
Score = 250 bits (638), Expect = 3e-67
Identities = 121/122 (99%), Positives = 122/122 (100%)
Query: 1 MRGRELPLVLLALVLCLAPRGRAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSS 60
MRGRELPLVLLALVLCLAPRGRAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSS
Sbjct: 1 MRGRELPLVLLALVLCLAPRGRAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSS 60
Query: 61 VSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQQPSWDSEDSSNFK 120
VSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQQPSWDSEDSSNFK
Sbjct: 61 VSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQQPSWDSEDSSNFK 120
Query: 121 DV 122
D+
Sbjct: 121 DL 122
>gi|45505145 neuromedin B isoform 2 [Homo sapiens]
Length = 154
Score = 38.1 bits (87), Expect = 0.002
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 8 LVLLALVLC-LAPRGRAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSSVSERGS 66
L+L AL+ +AP +P P + + +++ RGN WA GH MGKKS E SS S G+
Sbjct: 14 LLLFALLAAGVAPLSWDLPEPRSRASKI-RVHSRGNLWATGHFMGKKSL-EPSSPSPLGT 71
Query: 67 LKQ-QLREYIRWEEAARNLLGLIEAKE 92
LR+ + + + +LLG++ K+
Sbjct: 72 APHTSLRD--QRLQLSHDLLGILLLKK 96
>gi|45505143 neuromedin B isoform 1 [Homo sapiens]
Length = 121
Score = 38.1 bits (87), Expect = 0.002
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 8 LVLLALVLC-LAPRGRAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSSVSERGS 66
L+L AL+ +AP +P P + + +++ RGN WA GH MGKKS E SS S G+
Sbjct: 14 LLLFALLAAGVAPLSWDLPEPRSRASKI-RVHSRGNLWATGHFMGKKSL-EPSSPSPLGT 71
Query: 67 LKQ-QLREYIRWEEAARNLLGLIEAKE 92
LR+ + + + +LLG++ K+
Sbjct: 72 APHTSLRD--QRLQLSHDLLGILLLKK 96
>gi|5454102 transforming, acidic coiled-coil containing protein 3
[Homo sapiens]
Length = 838
Score = 36.6 bits (83), Expect = 0.007
Identities = 20/77 (25%), Positives = 31/77 (40%)
Query: 61 VSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQQPSWDSEDSSNFK 120
+ ER LK LR+ ++ A + + + PP P + G+ WD D NF
Sbjct: 357 LGERSGLKPPLRKAAVRQQKAPQEVEEDDGRSGAGEDPPMPASRGSYHLDWDKMDDPNFI 416
Query: 121 DVGSKGKGSQREGRNPQ 137
G K E + P+
Sbjct: 417 PFGGDTKSGCSEAQPPE 433
>gi|9910430 matrix, extracellular phosphoglycoprotein with ASARM
motif (bone) [Homo sapiens]
Length = 525
Score = 35.4 bits (80), Expect = 0.016
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 96 HQPPQPKALGNQQPSWDSEDSSNFKDVGSKGKGSQREG 133
H PP P ++ S D+ +S+N+ ++ GKGS R+G
Sbjct: 373 HYPPAPSKEKRKEGSSDAAESTNYNEIPKNGKGSTRKG 410
>gi|31083156 interleukin 20 receptor, alpha [Homo sapiens]
Length = 553
Score = 30.8 bits (68), Expect = 0.39
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 4 RELPLVLLALVLCLAPRGRAVPLPAGG 30
R LPL L L+L AP GRAVP +GG
Sbjct: 10 RPLPLPPLLLLLLAAPWGRAVPCVSGG 36
>gi|154350224 hypothetical protein LOC84923 isoform 2 [Homo sapiens]
Length = 186
Score = 30.0 bits (66), Expect = 0.66
Identities = 35/128 (27%), Positives = 46/128 (35%), Gaps = 15/128 (11%)
Query: 21 GRAVPLPAGGGTVLTKMY--PRGNHWAV-------GHLMGKKSTGESSSVSERGSLKQQL 71
GR + GGT T+ Y P + A G G+++T S S RG+ +
Sbjct: 3 GRGADAGSSGGTGPTEGYSPPAASTRAAARAKARGGGRGGRRNTTPSVP-SLRGAAPRSF 61
Query: 72 REYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQ---QPSWDSEDSSNFKDVGSKGKG 128
E R E NH PPQ K Q SWD+E S + D G
Sbjct: 62 HPPAAMSERLRPRKRRRNGNEEDNHLPPQTKRSSRNPVFQDSWDTESSGS--DSGGSSSS 119
Query: 129 SQREGRNP 136
S +P
Sbjct: 120 SSSSINSP 127
>gi|239582720 ATG9 autophagy related 9 homolog B [Homo sapiens]
Length = 924
Score = 29.6 bits (65), Expect = 0.86
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Query: 67 LKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQQPSWDSEDSS 117
L QQ ++ W EAA ++L P QP + ++PSW S+ SS
Sbjct: 841 LHQQQQQQEPWGEAAASILS------RPCSSPSQPPSPDEEKPSWSSDGSS 885
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 29.6 bits (65), Expect = 0.86
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 8/70 (11%)
Query: 35 TKMYPRGNHWAVGHLMGKKSTGESSSVSERGSLKQQLREYIRWEEAARNLLGLIEAKENR 94
TK +G W L GKK T L + I W+E + L E +E +
Sbjct: 2099 TKEPKKGESWFFRWLPGKKKT--------EAYLPDDKNKSIVWDEKKNQWVNLNEPEEEK 2150
Query: 95 NHQPPQPKAL 104
PP P ++
Sbjct: 2151 KAPPPPPTSM 2160
>gi|45387958 1A6/DRIM (down-regulated in metastasis) interacting
protein [Homo sapiens]
Length = 1209
Score = 29.3 bits (64), Expect = 1.1
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 53 KSTGESSSVSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQ 107
+S G+SSSV S++Q++R ++ + + +LL E+ P P L +Q
Sbjct: 520 RSDGDSSSVDSDDSIEQEIRTFLALKAQSGSLLARGESCPQAAQGPLLPPGLNSQ 574
>gi|157384971 cyclin G associated kinase [Homo sapiens]
Length = 1311
Score = 28.9 bits (63), Expect = 1.5
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 56 GESSSVSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQP-PQPKALGNQQPSWDSE 114
GE S ++ S L + W E A + + A E P QP G+Q S+
Sbjct: 1019 GEPSKMTASSSNPDLLGGWAAWTETAASAVAPTPATEGPLFSPGGQPAPCGSQASWTKSQ 1078
Query: 115 DSSNFKDVGSKGKGSQ 130
+ F D+G G Q
Sbjct: 1079 NPDPFADLGDLSSGLQ 1094
>gi|169212085 PREDICTED: similar to poly(A) binding protein
interacting protein 1 [Homo sapiens]
Length = 516
Score = 28.5 bits (62), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Query: 92 ENRNHQPPQPKALGNQQP 109
E HQPPQPKA G QP
Sbjct: 76 ERARHQPPQPKAPGFLQP 93
>gi|239752553 PREDICTED: similar to poly(A) binding protein
interacting protein 1 [Homo sapiens]
Length = 457
Score = 28.5 bits (62), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Query: 92 ENRNHQPPQPKALGNQQP 109
E HQPPQPKA G QP
Sbjct: 17 ERARHQPPQPKAPGFLQP 34
>gi|89041275 PREDICTED: similar to poly(A) binding protein
interacting protein 1 [Homo sapiens]
Length = 488
Score = 28.5 bits (62), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Query: 92 ENRNHQPPQPKALGNQQP 109
E HQPPQPKA G QP
Sbjct: 48 ERARHQPPQPKAPGFLQP 65
>gi|17511255 poly(A) binding protein interacting protein 1 isoform 1
[Homo sapiens]
Length = 479
Score = 28.5 bits (62), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Query: 92 ENRNHQPPQPKALGNQQP 109
E HQPPQPKA G QP
Sbjct: 39 ERARHQPPQPKAPGFLQP 56
>gi|118498337 HECT domain containing 1 [Homo sapiens]
Length = 2610
Score = 28.5 bits (62), Expect = 1.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 88 IEAKENRNHQPPQPKALGNQQPSWDSEDSSNFKD 121
+E + +H+ Q GNQ PSW +ED N+ +
Sbjct: 2475 MEKLSSFSHEEVQMILCGNQSPSWAAEDIINYTE 2508
>gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens]
Length = 930
Score = 28.1 bits (61), Expect = 2.5
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 22 RAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSSVSERGSLKQQLREYIRWEEAA 81
R +P A + ++ G LM KS+G+S + L++ RW EA
Sbjct: 134 RMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEF--SHLQDATRWMEAN 191
Query: 82 RNLLGLIEAKENRNHQPPQPK 102
++ L ++ K + ++ P+PK
Sbjct: 192 QHSLNILGQKVSMHYSDPKPK 212
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 28.1 bits (61), Expect = 2.5
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 91 KENRNHQPPQPKALGNQQPSWDSEDSSNFKDVGSK 125
K++ QPP+ KA+ QQP SEDSS+ D S+
Sbjct: 301 KKSLGTQPPK-KAVEKQQPVESSEDSSDESDSSSE 334
>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
Length = 1444
Score = 28.1 bits (61), Expect = 2.5
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 47 GHLMGKK-----STGESSSVSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQP 101
GH + K+ S +S S+ + ++K Q + + NL + RN P QP
Sbjct: 936 GHQLEKRLSHRPSLRQSHSLDSKPTVKSQWTLEVPSSSSCANL------ETERNSDPLQP 989
Query: 102 KALGNQQPSWDSEDSSNFKDV-GSKGKGSQREGRNP 136
+A + WD + +F++ G KG + + P
Sbjct: 990 QAPRREITGWDEKALRSFREFSGLKGAEAPPNQKGP 1025
>gi|109948292 hypothetical protein LOC57614 [Homo sapiens]
Length = 1216
Score = 28.1 bits (61), Expect = 2.5
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 62 SERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPKALGNQQPSWDSEDSSNFKD 121
SE+ SL +Q+R + +N I A + + QPP +Q P DSEDS D
Sbjct: 371 SEKWSLMEQIRRLKSEMDFLKNEHFAIPAVCD-SVQPPL-----DQLPHKDSEDSGQHPD 424
Query: 122 VGSKGKGSQRE 132
V S KG +
Sbjct: 425 VNSSDKGKNTD 435
>gi|239756547 PREDICTED: hypothetical protein [Homo sapiens]
Length = 240
Score = 27.7 bits (60), Expect = 3.3
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 17/52 (32%)
Query: 70 QLREYIRWEEAARNLLGLIEAKENRNHQPPQPK-------ALGNQQPSWDSE 114
++R + R E AAR GL PP+P+ LG+ QPSW+ E
Sbjct: 75 RVRGWRRSEPAARTAQGL----------PPEPEPTHTRVAGLGSSQPSWEGE 116
>gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens]
Length = 852
Score = 27.7 bits (60), Expect = 3.3
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 49 LMGKKSTGESSSVSERGSLKQQLREYIRWEEAARNLLGLIEAKENRNHQPPQPK 102
LM KS+G+S + L++ RW EA ++ L ++ K + ++ P+PK
Sbjct: 84 LMRNKSSGQSRGFAFVEF--SHLQDATRWMEANQHSLNILGQKVSMHYSDPKPK 135
>gi|156564407 phospholipase D2 [Homo sapiens]
Length = 933
Score = 27.3 bits (59), Expect = 4.3
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
Query: 74 YIRWEEAARNLLGLIEAKENRNHQPPQPKA-------LGNQQPSWDSEDSSN 118
Y RW++ L L ++ E+ QPP P+ L + Q W +D SN
Sbjct: 462 YGRWDDLHYRLTDLGDSSESAASQPPTPRPDSPATPDLSHNQFFWLGKDYSN 513
>gi|26051216 calcium/calmodulin-dependent protein kinase II beta
isoform 7 [Homo sapiens]
Length = 479
Score = 27.3 bits (59), Expect = 4.3
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 11/87 (12%)
Query: 31 GTVLTKMYPRGNHWAVGHLMGKKSTGESSSVSERGSLKQQLREYIRWEEAARNLLGLIEA 90
G +LT M N A L+ KK+ G S + + R +E + LIEA
Sbjct: 302 GAILTTMLATRNFSAAKSLLNKKADGVKESSDSANTTIEDEDAKARKQEIIKTTEQLIEA 361
Query: 91 KENRNHQPP-----------QPKALGN 106
N + + +P+ALGN
Sbjct: 362 VNNGDFEAYAKICDPGLTSFEPEALGN 388
>gi|21361535 lethal, Chr 7, Rinchik 6 [Homo sapiens]
Length = 197
Score = 27.3 bits (59), Expect = 4.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 24 VPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSSVSERGSLK 68
+P P G G + YP N V L+G + G+ S++ + LK
Sbjct: 44 IPFPEGMGGSVYFSYPDSNGMPVWQLLGFVTNGKPSAIFKISGLK 88
>gi|4503627 coagulation factor XI precursor [Homo sapiens]
Length = 625
Score = 26.9 bits (58), Expect = 5.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 43 HWAVGHLMGKKSTGESSSVSERGSLKQQLREYIRW 77
H V HL+G S GE + ER + + EY+ W
Sbjct: 583 HNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDW 617
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 26.6 bits (57), Expect = 7.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 22 RAVPLPAGGGTVLTKMYPRGNHWAVGHLMGKKSTGESSSVSERGSLKQQL 71
++ P P G T+ T +YP+ H ++ K + +S E +L+ QL
Sbjct: 6380 KSPPFPEGPDTISTAIYPKTQHKSLLEQFTPKEKNKLTSHLESKALEIQL 6429
>gi|228008333 rhophilin, Rho GTPase binding protein 2 [Homo
sapiens]
Length = 686
Score = 26.6 bits (57), Expect = 7.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 55 TGESSSVSERGSLKQQLREYIRWEEAARNLL 85
TG S ++R +L QQ+ + +R A NLL
Sbjct: 31 TGRSKLQNQRAALNQQILKAVRMRTGAENLL 61
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,489,033
Number of Sequences: 37866
Number of extensions: 310400
Number of successful extensions: 875
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 838
Number of HSP's gapped (non-prelim): 60
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.