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Search of human proteins with 6005784
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo
sapiens]
(644 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo sapi... 1303 0.0
gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo sa... 1286 0.0
gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo sa... 1193 0.0
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 37 0.043
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 37 0.043
gi|31317305 M-phase phosphoprotein 10 [Homo sapiens] 37 0.056
gi|55770895 ERBB2 interacting protein isoform 7 [Homo sapiens] 37 0.056
gi|8923909 ERBB2 interacting protein isoform 2 [Homo sapiens] 37 0.056
gi|4826870 nucleobindin 2 [Homo sapiens] 37 0.074
gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo sap... 37 0.074
gi|18087817 coiled-coil domain containing 34 isoform 2 [Homo sap... 37 0.074
gi|42542392 CCAAT/enhancer binding protein zeta [Homo sapiens] 35 0.21
gi|21327708 nucleosome assembly protein 1-like 1 [Homo sapiens] 35 0.21
gi|4758756 nucleosome assembly protein 1-like 1 [Homo sapiens] 35 0.21
gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens] 35 0.28
gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens] 35 0.28
gi|241982780 programmed cell death 6 interacting protein isoform... 35 0.28
gi|22027538 programmed cell death 6 interacting protein isoform ... 35 0.28
gi|21735569 claspin [Homo sapiens] 34 0.37
gi|55956788 nucleolin [Homo sapiens] 34 0.48
gi|6912604 acidic nuclear phosphoprotein 32C [Homo sapiens] 34 0.48
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 33 0.62
gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 K... 33 0.62
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 33 1.1
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 32 1.4
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 32 1.4
gi|83715968 sarcoma antigen NY-SAR-79 [Homo sapiens] 32 1.4
gi|194097365 FtsJ homolog 3 [Homo sapiens] 32 1.4
gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens] 32 1.8
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 32 1.8
>gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo
sapiens]
Length = 644
Score = 1303 bits (3373), Expect = 0.0
Identities = 644/644 (100%), Positives = 644/644 (100%)
Query: 1 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF 60
MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
Sbjct: 1 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF 60
Query: 61 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE 120
NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
Sbjct: 61 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE 120
Query: 121 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK 180
AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
Sbjct: 121 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK 180
Query: 181 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP 240
ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
Sbjct: 181 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP 240
Query: 241 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL 300
IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
Sbjct: 241 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL 300
Query: 301 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL 360
GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
Sbjct: 301 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL 360
Query: 361 EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP 420
EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP
Sbjct: 361 EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP 420
Query: 421 DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP 480
DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP
Sbjct: 421 DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP 480
Query: 481 ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD 540
ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD
Sbjct: 481 ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD 540
Query: 541 NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL 600
NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL
Sbjct: 541 NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL 600
Query: 601 VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN 644
VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN
Sbjct: 601 VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN 644
>gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo
sapiens]
Length = 677
Score = 1286 bits (3329), Expect = 0.0
Identities = 644/677 (95%), Positives = 644/677 (95%), Gaps = 33/677 (4%)
Query: 1 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF 60
MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
Sbjct: 1 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF 60
Query: 61 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE 120
NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
Sbjct: 61 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE 120
Query: 121 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK 180
AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
Sbjct: 121 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK 180
Query: 181 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP 240
ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
Sbjct: 181 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP 240
Query: 241 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL 300
IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
Sbjct: 241 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL 300
Query: 301 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL 360
GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
Sbjct: 301 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL 360
Query: 361 EMAENYFQLSVDWPE---------------------------------SSLAMSPGEEIL 387
EMAENYFQLSVDWPE SSLAMSPGEEIL
Sbjct: 361 EMAENYFQLSVDWPERLEVQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEIL 420
Query: 388 TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN 447
TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN
Sbjct: 421 TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN 480
Query: 448 YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD 507
YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD
Sbjct: 481 YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD 540
Query: 508 LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ 567
LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ
Sbjct: 541 LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ 600
Query: 568 VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV 627
VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV
Sbjct: 601 VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV 660
Query: 628 QLPDNTDHRPTSKPTKN 644
QLPDNTDHRPTSKPTKN
Sbjct: 661 QLPDNTDHRPTSKPTKN 677
>gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo
sapiens]
Length = 601
Score = 1193 bits (3087), Expect = 0.0
Identities = 601/644 (93%), Positives = 601/644 (93%), Gaps = 43/644 (6%)
Query: 1 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF 60
MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
Sbjct: 1 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF 60
Query: 61 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE 120
NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
Sbjct: 61 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE 120
Query: 121 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK 180
AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
Sbjct: 121 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK 180
Query: 181 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP 240
ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
Sbjct: 181 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP 240
Query: 241 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL 300
IDLRACRVFKTFLPETRIMTS
Sbjct: 241 IDLRACRVFKTFLPETRIMTS--------------------------------------- 261
Query: 301 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL 360
AHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
Sbjct: 262 ----AHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL 317
Query: 361 EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP 420
EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP
Sbjct: 318 EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP 377
Query: 421 DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP 480
DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP
Sbjct: 378 DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP 437
Query: 481 ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD 540
ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD
Sbjct: 438 ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD 497
Query: 541 NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL 600
NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL
Sbjct: 498 NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL 557
Query: 601 VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN 644
VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN
Sbjct: 558 VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN 601
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 37.4 bits (85), Expect = 0.043
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 410 EDDDQWLDLSPDQLDQLLQEAVGKKE--SESVSKEEKEQNYDLTEVSESMKAFISKVSTH 467
E+D + + D +++L E ++E +S KEE+E Y+ ES + + +
Sbjct: 594 ENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADE 653
Query: 468 KGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETH 527
KG E + +E DAD L F++ ++D +++D D E L DDD + +
Sbjct: 654 KGLEAADKKAEEG---DADEKL--FEESDDKEDEDADGKEVEDAD-EKLFEDDDSNEKLF 707
Query: 528 EPGEEASLK 536
+ E++S K
Sbjct: 708 DEEEDSSEK 716
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 37.4 bits (85), Expect = 0.043
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 410 EDDDQWLDLSPDQLDQLLQEAVGKKE--SESVSKEEKEQNYDLTEVSESMKAFISKVSTH 467
E+D + + D +++L E ++E +S KEE+E Y+ ES + + +
Sbjct: 594 ENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADE 653
Query: 468 KGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETH 527
KG E + +E DAD L F++ ++D +++D D E L DDD + +
Sbjct: 654 KGLEAADKKAEEG---DADEKL--FEESDDKEDEDADGKEVEDAD-EKLFEDDDSNEKLF 707
Query: 528 EPGEEASLK 536
+ E++S K
Sbjct: 708 DEEEDSSEK 716
>gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]
Length = 681
Score = 37.0 bits (84), Expect = 0.056
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Query: 396 DIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSE 455
D+EDL++E + DD + + + + L ++S S E+ + ++D++++ +
Sbjct: 129 DLEDLEEEEVSDMGNDDPEMGERAENSSKSDL------RKSPVFSDEDSDLDFDISKLEQ 182
Query: 456 SMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFEC 515
K +KG PRE S I D L+ + L E + D +DE+ E
Sbjct: 183 QSKV------QNKGQGKPREKS---IVDDKFFKLSEMEAYLENIEKEEERKDDNDEEEED 233
Query: 516 LDSDDDLDFETHEPGEEASLK 536
+D +D+D + E G S K
Sbjct: 234 IDFFEDIDSDEDEGGLFGSKK 254
>gi|55770895 ERBB2 interacting protein isoform 7 [Homo sapiens]
Length = 1302
Score = 37.0 bits (84), Expect = 0.056
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 30/225 (13%)
Query: 384 EEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEE 443
+E+ +++T+ + LK E N +D DL P + Q + + VG K SES + +
Sbjct: 489 DELKNMVKTVQTIVHRLKDEETN-----EDSGRDLKPHEDQQDINKDVGVKTSESTTTVK 543
Query: 444 KEQNYDLTEVSESMKAFI-SKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNE 502
++V E K I + V E P P+T + + N +
Sbjct: 544 -------SKVDEREKYMIGNSVQKISEPEAEISPGSLPVTANMKASENLKHIV------- 589
Query: 503 SDSDDLDDEDFECLDSDDDLDF-ETHEPGEEASLKG----TLDNLKSYMAQMDQELAHTC 557
+ DD+ +E E L SD+++ E P E S+ L N K + L+
Sbjct: 590 -NHDDVFEESEE-LSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKETDSLSDEV 647
Query: 558 ISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPV---DVDLN 599
S + S+ +D+ S DS S+ +PV +D+N
Sbjct: 648 THNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIDIN 692
>gi|8923909 ERBB2 interacting protein isoform 2 [Homo sapiens]
Length = 1371
Score = 37.0 bits (84), Expect = 0.056
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 30/225 (13%)
Query: 384 EEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEE 443
+E+ +++T+ + LK E N +D DL P + Q + + VG K SES + +
Sbjct: 489 DELKNMVKTVQTIVHRLKDEETN-----EDSGRDLKPHEDQQDINKDVGVKTSESTTTVK 543
Query: 444 KEQNYDLTEVSESMKAFI-SKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNE 502
++V E K I + V E P P+T + + N +
Sbjct: 544 -------SKVDEREKYMIGNSVQKISEPEAEISPGSLPVTANMKASENLKHIV------- 589
Query: 503 SDSDDLDDEDFECLDSDDDLDF-ETHEPGEEASLKG----TLDNLKSYMAQMDQELAHTC 557
+ DD+ +E E L SD+++ E P E S+ L N K + L+
Sbjct: 590 -NHDDVFEESEE-LSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKETDSLSDEV 647
Query: 558 ISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPV---DVDLN 599
S + S+ +D+ S DS S+ +PV +D+N
Sbjct: 648 THNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIDIN 692
>gi|4826870 nucleobindin 2 [Homo sapiens]
Length = 420
Score = 36.6 bits (83), Expect = 0.074
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 25/180 (13%)
Query: 386 ILTLLQTIPFDIEDLKK------EAANLPPEDD----DQWLDLSPDQL--DQLLQEAVGK 433
+LT L+ +P DI+ K E+A + P D D++L D L D+ +E + K
Sbjct: 18 LLTALEAVPIDIDKTKVQNIHPVESAKIEPPDTGLYYDEYLKQVIDVLETDKHFREKLQK 77
Query: 434 KESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAEL-----PREPSEAPITFDADSF 488
+ E + + DL VS ++ + ++ + L + S I D +
Sbjct: 78 ADIEEIKSGRLSKELDL--VSHHVRTKLDELKRQEVGRLRMLIKAKLDSLQDIGMDHQAL 135
Query: 489 LNYFDKILGPRPNESDSDDLD------DEDFECLDSDDDLDFETHEPGEEASLKGTLDNL 542
L FD + P++ +S DLD D E D +F+ +E +E + L L
Sbjct: 136 LKQFDHLNHLNPDKFESTDLDMLIKAATSDLEHYDKTRHEEFKKYEMMKEHERREYLKTL 195
>gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo
sapiens]
Length = 373
Score = 36.6 bits (83), Expect = 0.074
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 468 KGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETH 527
+G E+ R PS P+ + LG + + D DD D ED E +D ++D+D + H
Sbjct: 43 QGLEVVRSPSP-PLPLSCSNSTRSLLSPLGHQSFQFDEDDGDGEDEEDVDDEEDVDEDAH 101
Query: 528 E-PGEEASLKG 537
+ + ASL+G
Sbjct: 102 DSEAKVASLRG 112
>gi|18087817 coiled-coil domain containing 34 isoform 2 [Homo
sapiens]
Length = 229
Score = 36.6 bits (83), Expect = 0.074
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 468 KGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETH 527
+G E+ R PS P+ + LG + + D DD D ED E +D ++D+D + H
Sbjct: 43 QGLEVVRSPSP-PLPLSCSNSTRSLLSPLGHQSFQFDEDDGDGEDEEDVDDEEDVDEDAH 101
Query: 528 E-PGEEASLKG 537
+ + ASL+G
Sbjct: 102 DSEAKVASLRG 112
>gi|42542392 CCAAT/enhancer binding protein zeta [Homo sapiens]
Length = 1054
Score = 35.0 bits (79), Expect = 0.21
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 34/128 (26%)
Query: 432 GKKESESVSKEEKEQNY--DLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFL 489
GK+ ++SV + K +++ D+ + + K F++K E S+ P+ D F
Sbjct: 769 GKENTDSVVMQPKRKHFIKDIRHLPVNSKEFLAK-----------EESQIPV--DEVFFH 815
Query: 490 NYFDKILGPRPNESDSD-----DLDDEDFE----------CLDS-DDDLDFETHEPGEEA 533
Y+ K+ + D+D D+DDE+FE C S DD+DF + +
Sbjct: 816 RYYKKVAVKEKQKRDADEESIEDVDDEEFEELIDTFEDDNCFSSGKDDMDFAGN---VKK 872
Query: 534 SLKGTLDN 541
KG DN
Sbjct: 873 RTKGAKDN 880
>gi|21327708 nucleosome assembly protein 1-like 1 [Homo sapiens]
Length = 391
Score = 35.0 bits (79), Expect = 0.21
Identities = 36/122 (29%), Positives = 44/122 (36%), Gaps = 36/122 (29%)
Query: 461 ISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDE-------DF 513
I K HKG R ++ T DSF N+F P +S DLDD+ DF
Sbjct: 273 IKKKQKHKGRGTVRTVTK---TVSNDSFFNFFAP-----PEVPESGDLDDDAEAILAADF 324
Query: 514 EC---------------------LDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQE 552
E D DDD D E E EE +G +N Y + DQ
Sbjct: 325 EIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQN 384
Query: 553 LA 554
A
Sbjct: 385 PA 386
>gi|4758756 nucleosome assembly protein 1-like 1 [Homo sapiens]
Length = 391
Score = 35.0 bits (79), Expect = 0.21
Identities = 36/122 (29%), Positives = 44/122 (36%), Gaps = 36/122 (29%)
Query: 461 ISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDE-------DF 513
I K HKG R ++ T DSF N+F P +S DLDD+ DF
Sbjct: 273 IKKKQKHKGRGTVRTVTK---TVSNDSFFNFFAP-----PEVPESGDLDDDAEAILAADF 324
Query: 514 EC---------------------LDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQE 552
E D DDD D E E EE +G +N Y + DQ
Sbjct: 325 EIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQN 384
Query: 553 LA 554
A
Sbjct: 385 PA 386
>gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens]
Length = 259
Score = 34.7 bits (78), Expect = 0.28
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 503 SDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQ------MDQELAHT 556
+D DD DD++ + + DDD DF+ E E+A +K ++ + + AQ D + + T
Sbjct: 160 ADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSST 219
Query: 557 CISKSFTTRNQVEPVSQTTDNNSDEED 583
SK + + E +T S ED
Sbjct: 220 PRSKGQESFKKQEKTPKTPKGPSSVED 246
>gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens]
Length = 294
Score = 34.7 bits (78), Expect = 0.28
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 503 SDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQ------MDQELAHT 556
+D DD DD++ + + DDD DF+ E E+A +K ++ + + AQ D + + T
Sbjct: 160 ADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSST 219
Query: 557 CISKSFTTRNQVEPVSQTTDNNSDEED 583
SK + + E +T S ED
Sbjct: 220 PRSKGQESFKKQEKTPKTPKGPSSVED 246
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 34.7 bits (78), Expect = 0.28
Identities = 20/76 (26%), Positives = 43/76 (56%)
Query: 383 GEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKE 442
G E++ +L+++ +++++KKE L + D++ L L Q+ V +E+ SV++
Sbjct: 550 GSEVVNVLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEALSVTEL 609
Query: 443 EKEQNYDLTEVSESMK 458
++ T+V ES+K
Sbjct: 610 DRVYGGLTTKVQESLK 625
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 34.7 bits (78), Expect = 0.28
Identities = 20/76 (26%), Positives = 43/76 (56%)
Query: 383 GEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKE 442
G E++ +L+++ +++++KKE L + D++ L L Q+ V +E+ SV++
Sbjct: 545 GSEVVNVLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEALSVTEL 604
Query: 443 EKEQNYDLTEVSESMK 458
++ T+V ES+K
Sbjct: 605 DRVYGGLTTKVQESLK 620
>gi|21735569 claspin [Homo sapiens]
Length = 1339
Score = 34.3 bits (77), Expect = 0.37
Identities = 40/185 (21%), Positives = 71/185 (38%), Gaps = 33/185 (17%)
Query: 423 LDQLLQEAVGKKESESVS----KEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSE 478
+D+LL GK S++ K +K++N + S K ST +EL ++ E
Sbjct: 908 MDELLDLCTGKFTSQAEKHLPRKSDKKENMEELLNLCSGKFTSQDASTPASSELNKQEKE 967
Query: 479 API-------------TFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFE 525
+ + +F D ++ G S+ ++ D ++ E DS +DL E
Sbjct: 968 SSMGDPMEEALALCSGSFPTDKEEEDEEEEFGDFRLVSNDNEFDSDEDEHSDSGNDLALE 1027
Query: 526 THEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSG 585
HE +E L + LK M R +E ++ + ++ ED
Sbjct: 1028 DHEDDDEEELLKRSEKLKRQM----------------RLRKYLEDEAEVSGSDVGSEDEY 1071
Query: 586 TGESV 590
GE +
Sbjct: 1072 DGEEI 1076
Score = 30.8 bits (68), Expect = 4.0
Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 22/156 (14%)
Query: 410 EDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFIS--KVSTH 467
E++++ D S + ++ +++ +KE E +EEKE+ + E+ + +S ++ T
Sbjct: 633 EEEEEMTDESEEDGEEKVEKE--EKEEELEEEEEKEEEEEEEGNQETAEFLLSSEEIETK 690
Query: 468 KGAELPREPSEA-------------PITFDADSFLNYFDKILG-----PRPNESDSDDLD 509
E+ +E ++ P + +DS L F P +S++D+
Sbjct: 691 DEKEMDKENNDGSSEIGKAVGFLSVPKSLSSDSTLLLFKDSSSKMGYFPTEEKSETDENS 750
Query: 510 DEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSY 545
+ LD DD T E +S + + SY
Sbjct: 751 GKQPSKLDEDDSCSLLTKESSHNSSFELIGSTIPSY 786
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 33.9 bits (76), Expect = 0.48
Identities = 34/143 (23%), Positives = 55/143 (38%), Gaps = 17/143 (11%)
Query: 410 EDDDQWLDLSPDQLDQLLQEAVGK---KESESVSKEEKEQNYDLTEVSESMKAFISKVST 466
E+DD+ D D+++ +A E E +E +++ D E +S + +
Sbjct: 157 EEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPA 216
Query: 467 HKGAELPREPSEAP-ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFE 525
P +A + D D E D D+ DD+D + D DD+ D E
Sbjct: 217 KGKKAAKVVPVKAKNVAEDEDE-------------EEDDEDEDDDDDEDDEDDDDEDDEE 263
Query: 526 THEPGEEASLKGTLDNLKSYMAQ 548
E EE +K K MA+
Sbjct: 264 EEEEEEEEPVKEAPGKRKKEMAK 286
>gi|6912604 acidic nuclear phosphoprotein 32C [Homo sapiens]
Length = 234
Score = 33.9 bits (76), Expect = 0.48
Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 22/169 (13%)
Query: 293 PQYRAHELGMKLAHGFEILCSKCSP----HFSDCK-KSLVTASPLWASFLESLKKNDYFK 347
P+ + +L ++++ G E+L KC + S K K L T PL LE+LK D F
Sbjct: 61 PKLKLRKLELRVSGGLEVLAEKCPNLTHLYLSGNKIKDLSTIEPL--KQLENLKSLDLFN 118
Query: 348 GLIEGSAQYRE---RLEMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEA 404
+ Y E +L + Y S W S E+ +E L E
Sbjct: 119 CEVTNLNDYGENVFKLLLQLTYLD-SCYWDHKEAPYSDIED----------HVEGLDDEE 167
Query: 405 ANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQNYDLTEV 453
E+ D+ + D+ + +E G++E S EE E+ Y+ EV
Sbjct: 168 EGEHEEEYDEDAQVVEDEEGE-EEEEEGEEEDVSGGDEEDEEGYNDGEV 215
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 33.5 bits (75), Expect = 0.62
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 497 GPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLK 536
G ++ D DD DD+D D DDD D E E GEE + K
Sbjct: 257 GEDEDDEDDDDDDDDD----DDDDDEDDEDEEDGEEENQK 292
Score = 30.4 bits (67), Expect = 5.3
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 501 NESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSY 545
++ DD +DED E D DDD D + + +E G +N K Y
Sbjct: 250 DQEHEDDGEDEDDEDDDDDDDDDDDDDDEDDEDEEDGEEENQKRY 294
>gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 KDa
isoform 2 [Homo sapiens]
Length = 686
Score = 33.5 bits (75), Expect = 0.62
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 20/117 (17%)
Query: 495 ILGPRPNESDSD----DLDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMD 550
IL PRP D+D ++ CL+ DFE + G+ SL + +
Sbjct: 542 ILDPRPGVVTKGFRTLDVDLDEVYCLN-----DFEEDDTGDHISLPRLATSTPVQHPETS 596
Query: 551 QELAHTCI----SKSFTTRNQV------EPVSQTTDNNSDEEDSGTGE-SVMAPVDV 596
E + + S+S+ +R Q EP + T + +EE+ G+GE + ++PV++
Sbjct: 597 GERSQARVTVSGSRSYPSRPQASPEEMQEPPAATEEEEEEEEEEGSGEGTTISPVNL 653
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 32.7 bits (73), Expect = 1.1
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 265 TKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHELGMKLAHGFEILCSKCSPHFSDCKK 324
++ L + V++ F D S + D + + G A L C+ H D +
Sbjct: 1823 SRLLESFAVEEDFEFDDNSSFS-EEEEDEEEEEEDSGPLSAEQSAALARSCAIHKEDLRD 1881
Query: 325 SLVTASP-----LWASFLESLKKNDYFKGLIEGSAQYRERLEMAENYFQLSV--DWPESS 377
L P L+A + +L+ D + +IEG R+R+ E Q +V P+SS
Sbjct: 1882 GLPVLIPKEDSLLYAGSVRTLQPPDIYSIVIEGERGNRQRIYSLEQLLQEAVLDVRPQSS 1941
Query: 378 LAMSPGEEI 386
+ PG +
Sbjct: 1942 RYLPPGTRV 1950
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 32.3 bits (72), Expect = 1.4
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 23/162 (14%)
Query: 324 KSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRE-------RLEMAENYFQLSVDWPES 376
K + T PL LE LK D F + YRE +L + Y + + P+S
Sbjct: 101 KDISTLEPL--KKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDS 158
Query: 377 SLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKES 436
+ +E E+ +E + EDD+ + D+ D ++ G ++
Sbjct: 159 DAEVDGVDE------------EEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDD 206
Query: 437 ESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSE 478
+ VS+EE+E + L E E + KG + RE +
Sbjct: 207 DEVSEEEEE--FGLDEEDEDEDEDEEEEEGGKGEKRKRETDD 246
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 32.3 bits (72), Expect = 1.4
Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 30/199 (15%)
Query: 405 ANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKE----EKEQNYDLTEVSESMKAF 460
AN D +W + +E +KE+E + ++ EKE+ L+ + S ++
Sbjct: 977 ANELDPDSLRWTPILISNAAVSEEEREAEKEAERLMEQASCWEKEEQEILSTRANSRQSP 1036
Query: 461 ISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDD 520
S +K P P+T + L + E D ++ ++E+ E + D+
Sbjct: 1037 AKVQSKNKYLH---SPESRPVTGERGQLLELSKESSEEEEEEEDEEEEEEEEEE--EEDE 1091
Query: 521 DLDFETHEPGEEASLKGTLDNL-----------KSYMAQMDQELAHTCISKSFTTRNQVE 569
+ + E E EE +++ + L + ++ + + I+ S TT E
Sbjct: 1092 EEEEEEEEEEEEENIQSSPPRLTKPQSVAIKRKRPFVLKKKRGRKRRRINSSVTT----E 1147
Query: 570 PVSQTTD------NNSDEE 582
+S+TT+ +NSDEE
Sbjct: 1148 TISETTEVLNEPFDNSDEE 1166
Score = 30.4 bits (67), Expect = 5.3
Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 17/153 (11%)
Query: 500 PNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCIS 559
P E DDL + E + +++ + E E GEE G ++ ++E
Sbjct: 1339 PGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEKEEPEISTE 1398
Query: 560 KSFTTR--------NQVEPVSQTTDNNSDEEDSGTGESV-MAPVDVDLNLVSNILESYSS 610
K + R + E S D+++D+ED ES + ++ +LE+ +
Sbjct: 1399 KEDSARLDDHEEEEEEDEEPSHNEDHDADDEDDSHMESAEVEKEELPRESFKEVLENQET 1458
Query: 611 ------QAGLAGPASNLLQSMGVQLPDNTDHRP 637
Q G + P +L GV L + + P
Sbjct: 1459 FLDLNVQPGHSNP--EVLMDCGVDLTASCNSEP 1489
>gi|83715968 sarcoma antigen NY-SAR-79 [Homo sapiens]
Length = 1079
Score = 32.3 bits (72), Expect = 1.4
Identities = 52/293 (17%), Positives = 121/293 (41%), Gaps = 24/293 (8%)
Query: 337 LESLKKNDYFKGLIEGSAQYRERLE----MAENYFQLSVDWPESSLAMSPGEEILTLLQT 392
L L K DY K L E Y + EN+ +L + E A+ + + L +
Sbjct: 149 LHLLAKEDYHKQLSEIEKYYATITGQFGLVKENHEKLEQNVRE---AIQSNKRLSALNKK 205
Query: 393 IPFDI----EDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKE---EKE 445
+I ++LKK A++L + + ++ ++E ++ E ++ E ++
Sbjct: 206 QEAEICSLKKELKKAASDLIKSKVTCQYKMGEENINLTIKEQKFQELQERLNMELELNEK 265
Query: 446 QNYDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDS 505
N ++T + E + I +S +L R+ +A +A+ + + R NE
Sbjct: 266 INEEITHIQEEKQDII--ISFQHMQQLLRQQIQANTEMEAELKVLKENNQTLERDNELQR 323
Query: 506 DDLDDEDFECLDSDDDLD-----FETHEP---GEEASLKGTLDNLKSYMAQMDQELAHTC 557
+ + + + + L+ ++ + ++ H GE +K L +LK ++ + C
Sbjct: 324 EKVKENEEKFLNLQNEHEKALGTWKRHAEELNGEINKIKNELSSLKETHIKLQEHYNKLC 383
Query: 558 ISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSS 610
K+F + + V + + NS+ + +++ + + + +E++ S
Sbjct: 384 NQKTFEEDKKFQNVPEVNNENSEMSTEKSENTIIQKYNTEQEIREENMENFCS 436
>gi|194097365 FtsJ homolog 3 [Homo sapiens]
Length = 847
Score = 32.3 bits (72), Expect = 1.4
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 396 DIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEK----------- 444
D ED P +++++ + +QL+Q L E ++ +E K++K
Sbjct: 343 DEEDSTAGTTKQPSKEEEE--EEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRER 400
Query: 445 -EQNYDLTEVS--ESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPN 501
E DL VS + + + +ST +G +L E ++ ++ AD+FL+ PR +
Sbjct: 401 VELKMDLPGVSIADEGETGMFSLSTIRGHQLLEEVTQGDMSA-ADTFLSDL-----PRDD 454
Query: 502 ESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKG 537
SD DD D LDSD D P E A ++G
Sbjct: 455 IYVSDVEDDGDDTSLDSDLD-------PEELAGVRG 483
>gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens]
Length = 265
Score = 32.0 bits (71), Expect = 1.8
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 503 SDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLK 543
+D DD DD++ + + DDD DF+ E E+A +K ++ K
Sbjct: 160 ADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKKGQESFK 200
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 32.0 bits (71), Expect = 1.8
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 13/178 (7%)
Query: 433 KKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYF 492
+++S+ S+E+ ++N E S+++ S+ S SE+ ++S +
Sbjct: 310 RRDSKGDSQEDSKENLSQEE-SQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGD-- 366
Query: 493 DKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQE 552
P P S +D +D D DS L E EE + + ++L +
Sbjct: 367 ----NPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESP 422
Query: 553 LAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSS 610
S+ + SQ+ +++S+E+DS + +S + D SN ES SS
Sbjct: 423 EDENSSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKED------SNSTESKSS 474
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,329,358
Number of Sequences: 37866
Number of extensions: 1243469
Number of successful extensions: 4956
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 4750
Number of HSP's gapped (non-prelim): 215
length of query: 644
length of database: 18,247,518
effective HSP length: 109
effective length of query: 535
effective length of database: 14,120,124
effective search space: 7554266340
effective search space used: 7554266340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.