Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ECD Sequence: fasta or formatted (677aa) NCBI GI: 209364547
Description:

suppressor of S. cerevisiae gcr2 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {601aa} suppressor of S. cerevisiae gcr2 isoform 3
alt prot {644aa} suppressor of S. cerevisiae gcr2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         45           3
 C cysteine            1.8         12           1
 D aspartate           7.5         51           3
 E glutamate           8.7         59           2
 F phenylalanine       4.7         32           2
 G glycine             4.1         28           2
 H histidine           1.9         13           1
 I isoleucine          5.2         35           2
 K lysine              5.8         39           2
 L leucine            10.3         70           2
 M methionine          2.1         14           1
 N asparagine          3.5         24           2
 P proline             7.4         50           3
 Q glutamine           4.3         29           2
 R arginine            4.4         30           2
 S serine              8.0         54           2
 T threonine           5.2         35           2
 V valine              4.6         31           1
 W tryptophan          1.3          9           1
 Y tyrosine            2.5         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppressor of S. cerevisiae gcr2 isoform 2 
ECD                   0.934   suppressor of S. cerevisiae gcr2 isoform 1 
ECD                   0.853   suppressor of S. cerevisiae gcr2 isoform 3 
ZNF283                0.023   zinc finger protein 283 
SEPSECS               0.016   Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN...
C16orf89              0.013   hypothetical protein LOC146556 isoform 1 
MAP3K15               0.012   mitogen-activated protein kinase kinase kinase 15 [...
PPIL3                 0.011   peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo...
LOC100128260          0.010   PREDICTED: hCG_1742852 
LOC100128260          0.010   PREDICTED: hCG_1742852 
HTATSF1               0.009   HIV-1 Tat specific factor 1 
HTATSF1               0.009   HIV-1 Tat specific factor 1 
MPHOSPH10             0.009   M-phase phosphoprotein 10 
ERBB2IP               0.009   ERBB2 interacting protein isoform 7 
ERBB2IP               0.009   ERBB2 interacting protein isoform 2 
NUCB2                 0.009   nucleobindin 2 
CCDC34                0.009   coiled-coil domain containing 34 isoform 1 
CCDC34                0.009   coiled-coil domain containing 34 isoform 2 
UTY                   0.009   tetratricopeptide repeat protein isoform 1 
LOC100288773          0.008   PREDICTED: hypothetical protein XP_002343911 
LOC100128260          0.008   PREDICTED: hCG_1742852 
CEBPZ                 0.007   CCAAT/enhancer binding protein zeta 
NAP1L1                0.007   nucleosome assembly protein 1-like 1 
NAP1L1                0.007   nucleosome assembly protein 1-like 1 
NPM1                  0.007   nucleophosmin 1 isoform 3 
NPM1                  0.007   nucleophosmin 1 isoform 1 
PDCD6IP               0.007   programmed cell death 6 interacting protein isoform...
PDCD6IP               0.007   programmed cell death 6 interacting protein isoform ...
LOC100128682          0.007   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.007   PREDICTED: hypothetical protein LOC100128682 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press