Search of human proteins with 6005764

Search of human proteins with 6005764

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6005764 GABA(A) receptor-associated protein [Homo sapiens]
         (117 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6005764 GABA(A) receptor-associated protein [Homo sapiens]         241   1e-64
gi|13899219 GABA(A) receptor-associated protein like 1 [Homo sap...   216   4e-57
gi|6005768 GABA(A) receptor-associated protein-like 2 [Homo sapi...   142   4e-35
gi|51972260 microtubule-associated protein 1 light chain 3 gamma...    90   3e-19
gi|12383056 microtubule-associated proteins 1A/1B light chain 3 ...    76   6e-15
gi|14210522 microtubule-associated protein 1 light chain 3 alpha...    73   5e-14
gi|148277548 microtubule-associated protein 1 light chain 3 beta...    72   7e-14
gi|31563518 microtubule-associated protein 1 light chain 3 alpha...    68   2e-12
gi|169183885 PREDICTED: similar to microtubule-associated protei...    62   1e-10
gi|169179756 PREDICTED: similar to microtubule-associated protei...    62   1e-10
gi|169180155 PREDICTED: similar to microtubule-associated protei...    62   1e-10
gi|239755918 PREDICTED: similar to microtubule-associated protei...    49   1e-06
gi|239750436 PREDICTED: similar to microtubule-associated protei...    49   1e-06
gi|239744738 PREDICTED: similar to microtubule-associated protei...    49   1e-06
gi|33186887 glutathione peroxidase 6 [Homo sapiens]                    28   1.2  
gi|5901948 FAS-associated factor 1 [Homo sapiens]                      28   1.6  
gi|38261969 APG12 autophagy 12-like [Homo sapiens]                     28   2.0  
gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo sap...    27   2.6  
gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo sap...    27   2.6  
gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo sa...    27   3.5  
gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo s...    27   3.5  
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s...    27   3.5  
gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens]          27   4.5  
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ...    27   4.5  
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ...    27   4.5  
gi|126032338 ryanodine receptor 3 [Homo sapiens]                       27   4.5  
gi|110349719 titin isoform N2-A [Homo sapiens]                         26   5.9  
gi|6006001 glutathione peroxidase 3 precursor [Homo sapiens]           26   7.7  
gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [H...    26   7.7  
gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [H...    26   7.7  

>gi|6005764 GABA(A) receptor-associated protein [Homo sapiens]
          Length = 117

 Score =  241 bits (614), Expect = 1e-64
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQF 60
           MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQF
Sbjct: 1   MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQF 60

Query: 61  YFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117
           YFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL
Sbjct: 61  YFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117


>gi|13899219 GABA(A) receptor-associated protein like 1 [Homo
           sapiens]
          Length = 117

 Score =  216 bits (549), Expect = 4e-57
 Identities = 101/116 (87%), Positives = 110/116 (94%)

Query: 1   MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQF 60
           MKF YKE+HPFE R+ EGEKIRKKYPDRVPVIVEKAPKAR+ DLDK+KYLVPSDLTVGQF
Sbjct: 1   MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQF 60

Query: 61  YFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
           YFLIRKRIHLR EDALFFFVNN IPPTSATMGQLY+++HEED+FLY+AYSDESVYG
Sbjct: 61  YFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116


>gi|6005768 GABA(A) receptor-associated protein-like 2 [Homo
           sapiens]
          Length = 117

 Score =  142 bits (359), Expect = 4e-35
 Identities = 67/116 (57%), Positives = 89/116 (76%)

Query: 1   MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQF 60
           MK+++KE+H  E R  E  KIR KYPDRVPVIVEK   ++I D+DK+KYLVPSD+TV QF
Sbjct: 1   MKWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQF 60

Query: 61  YFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
            ++IRKRI L +E A+F FV+  +P +S TMGQLY++  +ED FLY+AYS E+ +G
Sbjct: 61  MWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 116


>gi|51972260 microtubule-associated protein 1 light chain 3 gamma
           [Homo sapiens]
          Length = 147

 Score = 90.1 bits (222), Expect = 3e-19
 Identities = 44/114 (38%), Positives = 74/114 (64%), Gaps = 2/114 (1%)

Query: 5   YKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKAR-IGDLDKKKYLVPSDLTVGQFYFL 63
           +K+      R+ E   IR K+P+++PV+VE+ P+   +  LDK K+LVP +LT+ QF  +
Sbjct: 13  FKQRKSLAIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSI 72

Query: 64  IRKRIHLRAEDALFFFVNN-VIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
           IR R+ LRA +A +  VNN  +   SATM ++Y+++ +ED F+Y+ Y+ +  +G
Sbjct: 73  IRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFG 126


>gi|12383056 microtubule-associated proteins 1A/1B light chain 3
           [Homo sapiens]
          Length = 125

 Score = 75.9 bits (185), Expect = 6e-15
 Identities = 36/115 (31%), Positives = 69/115 (60%), Gaps = 2/115 (1%)

Query: 5   YKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAP-KARIGDLDKKKYLVPSDLTVGQFYFL 63
           +K+   FE+R  +   IR+++P ++PVI+E+   + ++  LDK K+LVP  + + +   +
Sbjct: 7   FKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKI 66

Query: 64  IRKRIHLRAEDALFFFVN-NVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117
           IR+R+ L A  A F  VN + +   S  + ++Y+   +ED FLY+ Y+ +  +G+
Sbjct: 67  IRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFGM 121


>gi|14210522 microtubule-associated protein 1 light chain 3 alpha
           isoform a [Homo sapiens]
          Length = 121

 Score = 72.8 bits (177), Expect = 5e-14
 Identities = 35/114 (30%), Positives = 66/114 (57%), Gaps = 2/114 (1%)

Query: 5   YKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAP-KARIGDLDKKKYLVPSDLTVGQFYFL 63
           +K+   F  R  E ++IR ++P ++PVI+E+   + ++  LDK K+LVP  + + +   +
Sbjct: 7   FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKI 66

Query: 64  IRKRIHLRAEDALFFFVN-NVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
           IR+R+ L    A F  VN + +   S  +  +Y++  +ED FLY+ Y+ +  +G
Sbjct: 67  IRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120


>gi|148277548 microtubule-associated protein 1 light chain 3 beta 2
           [Homo sapiens]
          Length = 125

 Score = 72.4 bits (176), Expect = 7e-14
 Identities = 35/115 (30%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 5   YKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAP-KARIGDLDKKKYLVPSDLTVGQFYFL 63
           +K+   FE+R  +   IR+++P ++PVI+E+   + ++  LDK K+LVP  + + +   +
Sbjct: 7   FKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKI 66

Query: 64  IRKRIHLRAEDALFFFVN-NVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117
           IR+R+ L A  A F  VN + +   S  + ++Y+   +ED FLY+  + +  +G+
Sbjct: 67  IRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVCASQETFGM 121


>gi|31563518 microtubule-associated protein 1 light chain 3 alpha
           isoform b [Homo sapiens]
          Length = 125

 Score = 67.8 bits (164), Expect = 2e-12
 Identities = 33/105 (31%), Positives = 62/105 (59%), Gaps = 2/105 (1%)

Query: 14  RRSEGEKIRKKYPDRVPVIVEKAP-KARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRA 72
           R  E ++IR ++P ++PVI+E+   + ++  LDK K+LVP  + + +   +IR+R+ L  
Sbjct: 20  RCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNP 79

Query: 73  EDALFFFVN-NVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
             A F  VN + +   S  +  +Y++  +ED FLY+ Y+ +  +G
Sbjct: 80  TQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124


>gi|169183885 PREDICTED: similar to microtubule-associated proteins
           1A/1B light chain 3 [Homo sapiens]
          Length = 157

 Score = 62.0 bits (149), Expect = 1e-10
 Identities = 35/117 (29%), Positives = 67/117 (57%), Gaps = 5/117 (4%)

Query: 5   YKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAP-KARIGDLDKKKYLVPS--DLTVGQFY 61
           +K+   F++R  +   I++++P + PVI E+   + ++  LDK K+LVP   D+ + +  
Sbjct: 38  FKQRRTFQQR-VDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELI 96

Query: 62  FLIRKRIHLRAEDALFFFVN-NVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117
            +IR+R+ L A  A    VN + +   S  + ++Y+   +ED FLY+ Y+ +  YG+
Sbjct: 97  KIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYGM 153


>gi|169179756 PREDICTED: similar to microtubule-associated proteins
           1A/1B light chain 3 [Homo sapiens]
          Length = 377

 Score = 62.0 bits (149), Expect = 1e-10
 Identities = 35/117 (29%), Positives = 67/117 (57%), Gaps = 5/117 (4%)

Query: 5   YKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAP-KARIGDLDKKKYLVPS--DLTVGQFY 61
           +K+   F++R  +   I++++P + PVI E+   + ++  LDK K+LVP   D+ + +  
Sbjct: 258 FKQRRTFQQR-VDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELI 316

Query: 62  FLIRKRIHLRAEDALFFFVN-NVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117
            +IR+R+ L A  A    VN + +   S  + ++Y+   +ED FLY+ Y+ +  YG+
Sbjct: 317 KIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYGM 373


>gi|169180155 PREDICTED: similar to microtubule-associated proteins
           1A/1B light chain 3 [Homo sapiens]
          Length = 377

 Score = 62.0 bits (149), Expect = 1e-10
 Identities = 35/117 (29%), Positives = 67/117 (57%), Gaps = 5/117 (4%)

Query: 5   YKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAP-KARIGDLDKKKYLVPS--DLTVGQFY 61
           +K+   F++R  +   I++++P + PVI E+   + ++  LDK K+LVP   D+ + +  
Sbjct: 258 FKQRRTFQQR-VDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELI 316

Query: 62  FLIRKRIHLRAEDALFFFVN-NVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117
            +IR+R+ L A  A    VN + +   S  + ++Y+   +ED FLY+ Y+ +  YG+
Sbjct: 317 KIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYGM 373


>gi|239755918 PREDICTED: similar to microtubule-associated protein 1
           light chain 3 beta [Homo sapiens]
          Length = 105

 Score = 48.5 bits (114), Expect = 1e-06
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 9/78 (11%)

Query: 44  LDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVN-----NVIPPTSATMGQLYQEH 98
           LDK K+LVP  + + +   +I++ + L A  A F  VN     +V  PTS    ++Y+  
Sbjct: 25  LDKTKFLVPDHVNMSELTKIIKRCLRLNANQAFFLLVNGPSTVSVSTPTS----EVYEGE 80

Query: 99  HEEDFFLYIAYSDESVYG 116
            +ED FLY  Y+ + ++G
Sbjct: 81  KDEDGFLYTVYASQEMFG 98


>gi|239750436 PREDICTED: similar to microtubule-associated protein 1
           light chain 3 beta [Homo sapiens]
          Length = 105

 Score = 48.5 bits (114), Expect = 1e-06
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 9/78 (11%)

Query: 44  LDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVN-----NVIPPTSATMGQLYQEH 98
           LDK K+LVP  + + +   +I++ + L A  A F  VN     +V  PTS    ++Y+  
Sbjct: 25  LDKTKFLVPDHVNMSELTKIIKRCLRLNANQAFFLLVNGPSTVSVSTPTS----EVYEGE 80

Query: 99  HEEDFFLYIAYSDESVYG 116
            +ED FLY  Y+ + ++G
Sbjct: 81  KDEDGFLYTVYASQEMFG 98


>gi|239744738 PREDICTED: similar to microtubule-associated proteins
           1A/1B light chain 3 [Homo sapiens]
          Length = 105

 Score = 48.5 bits (114), Expect = 1e-06
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 9/78 (11%)

Query: 44  LDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVN-----NVIPPTSATMGQLYQEH 98
           LDK K+LVP  + + +   +I++ + L A  A F  VN     +V  PTS    ++Y+  
Sbjct: 25  LDKTKFLVPDHVNMSELTKIIKRCLRLNANQAFFLLVNGPSTVSVSTPTS----EVYEGE 80

Query: 99  HEEDFFLYIAYSDESVYG 116
            +ED FLY  Y+ + ++G
Sbjct: 81  KDEDGFLYTVYASQEMFG 98


>gi|33186887 glutathione peroxidase 6 [Homo sapiens]
          Length = 221

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 15/49 (30%), Positives = 22/49 (44%)

Query: 48  KYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQ 96
           KY+ P    V  F    +  ++   E  +F F+ N  PPTS  +G   Q
Sbjct: 120 KYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQ 168


>gi|5901948 FAS-associated factor 1 [Homo sapiens]
          Length = 650

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 12/48 (25%), Positives = 26/48 (54%)

Query: 64  IRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSD 111
           + K +HL   ++L+    ++ PP+S++     QE   ++F L I + +
Sbjct: 155 VLKSLHLPKNNSLYVLTPDLPPPSSSSHAGALQESLNQNFMLIITHRE 202


>gi|38261969 APG12 autophagy 12-like [Homo sapiens]
          Length = 187

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 41  IGD---LDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPT-SATMGQLYQ 96
           +GD   +  KK+ V    T+      I+K + L A + LF +VN    P+    +G LY 
Sbjct: 109 VGDTPIMKTKKWAVERTRTIQGLIDFIKKFLKLVASEQLFIYVNQSFAPSPDQEVGTLY- 167

Query: 97  EHHEEDFFLYIAYSDESVYG 116
           E    D  L + Y     +G
Sbjct: 168 ECFGSDGKLVLHYCKSQAWG 187


>gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo
           sapiens]
          Length = 1094

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 23  KKYPDRVPVIVEKAPKARIGDLDKKKYLV 51
           +KY  R+P +V++  K  I DLD  +Y++
Sbjct: 892 EKYNIRIPELVQRIEKCHIEDLDFAEYIL 920


>gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo
           sapiens]
          Length = 1043

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 23  KKYPDRVPVIVEKAPKARIGDLDKKKYLV 51
           +KY  R+P +V++  K  I DLD  +Y++
Sbjct: 841 EKYNIRIPELVQRIEKCHIEDLDFAEYIL 869


>gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo
           sapiens]
          Length = 395

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 19/72 (26%)

Query: 43  DLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEED 102
           D D   YL P + T G  +F              FF  NN   P+    G+   + HEE 
Sbjct: 97  DADGNGYLTPQEFTTGFSHF--------------FFSQNN---PSQEDAGEQVAQRHEEK 139

Query: 103 FFLYIAYSDESV 114
             +Y++  DE +
Sbjct: 140 --VYLSRGDEDL 149


>gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo
           sapiens]
          Length = 462

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 19/72 (26%)

Query: 43  DLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEED 102
           D D   YL P + T G  +F              FF  NN   P+    G+   + HEE 
Sbjct: 97  DADGNGYLTPQEFTTGFSHF--------------FFSQNN---PSQEDAGEQVAQRHEEK 139

Query: 103 FFLYIAYSDESV 114
             +Y++  DE +
Sbjct: 140 --VYLSRGDEDL 149


>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
           sapiens]
          Length = 731

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 19/72 (26%)

Query: 43  DLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEED 102
           D D   YL P + T G  +F              FF  NN   P+    G+   + HEE 
Sbjct: 97  DADGNGYLTPQEFTTGFSHF--------------FFSQNN---PSQEDAGEQVAQRHEEK 139

Query: 103 FFLYIAYSDESV 114
             +Y++  DE +
Sbjct: 140 --VYLSRGDEDL 149


>gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens]
          Length = 4967

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 10/14 (71%), Positives = 12/14 (85%)

Query: 9   HPFEKRRSEGEKIR 22
           HP  K+RSEGEK+R
Sbjct: 163 HPASKQRSEGEKVR 176


>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
           sapiens]
          Length = 5033

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 10/14 (71%), Positives = 12/14 (85%)

Query: 9   HPFEKRRSEGEKIR 22
           HP  K+RSEGEK+R
Sbjct: 150 HPASKQRSEGEKVR 163


>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
           sapiens]
          Length = 5038

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 10/14 (71%), Positives = 12/14 (85%)

Query: 9   HPFEKRRSEGEKIR 22
           HP  K+RSEGEK+R
Sbjct: 150 HPASKQRSEGEKVR 163


>gi|126032338 ryanodine receptor 3 [Homo sapiens]
          Length = 4870

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 10/14 (71%), Positives = 12/14 (85%)

Query: 9   HPFEKRRSEGEKIR 22
           HP  K+RSEGEK+R
Sbjct: 153 HPASKQRSEGEKVR 166


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 7/40 (17%)

Query: 20    KIRKKYPDR---VPVIVEKAPKARIGDLDK----KKYLVP 52
             K+ KK P+    VPV  ++AP A++ ++ K    KK LVP
Sbjct: 10294 KVSKKIPEEKVPVPVQKKEAPPAKVPEVPKKVPEKKVLVP 10333


>gi|6006001 glutathione peroxidase 3 precursor [Homo sapiens]
          Length = 226

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 48  KYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMG 92
           KY+ P    V  F    +  ++   E   + F+ N  PPTS  +G
Sbjct: 120 KYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLG 164


>gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [Homo
           sapiens]
          Length = 464

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 3/85 (3%)

Query: 3   FVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYF 62
           F+  + HPF +  S  + ++KK P      V      R  D    +  VP  + V   Y 
Sbjct: 378 FLEIQNHPFFESLSWADLVQKKIPPPFNPNVAGPDDIRNFDTAFTEETVPYSVCVSSDYS 437

Query: 63  LIRKRIHLRAEDALFFFVNNVIPPT 87
           ++   + L A+DA   F  +  PP+
Sbjct: 438 IVNASV-LEADDAFVGF--SYAPPS 459


>gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
           sapiens]
          Length = 496

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 3/85 (3%)

Query: 3   FVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYF 62
           F+  + HPF +  S  + ++KK P      V      R  D    +  VP  + V   Y 
Sbjct: 410 FLEIQNHPFFESLSWADLVQKKIPPPFNPNVAGPDDIRNFDTAFTEETVPYSVCVSSDYS 469

Query: 63  LIRKRIHLRAEDALFFFVNNVIPPT 87
           ++   + L A+DA   F  +  PP+
Sbjct: 470 IVNASV-LEADDAFVGF--SYAPPS 491


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.142    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,576,960
Number of Sequences: 37866
Number of extensions: 179772
Number of successful extensions: 425
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 389
Number of HSP's gapped (non-prelim): 31
length of query: 117
length of database: 18,247,518
effective HSP length: 87
effective length of query: 30
effective length of database: 14,953,176
effective search space: 448595280
effective search space used: 448595280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.