Search of human proteins with 59709436

Search of human proteins with 59709436

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|59709436 tumor necrosis factor, alpha-induced protein 8-like
3 [Homo sapiens]
         (292 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|59709436 tumor necrosis factor, alpha-induced protein 8-like ...   580   e-166
gi|117676365 tumor necrosis factor, alpha-induced protein 8 isof...   261   7e-70
gi|117676370 tumor necrosis factor, alpha-induced protein 8 isof...   258   6e-69
gi|22748781 tumor necrosis factor, alpha-induced protein 8-like ...   212   4e-55
gi|157389001 tumor necrosis factor, alpha-induced protein 8-like...   209   2e-54
gi|100814339 coiled-coil domain containing 146 [Homo sapiens]          38   0.009
gi|4758648 kinesin family member 5B [Homo sapiens]                     35   0.078
gi|153791839 sodium channel associated protein 1 [Homo sapiens]        34   0.17 
gi|16418451 hypothetical protein LOC116328 [Homo sapiens]              31   1.1  
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r...    30   1.9  
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r...    30   1.9  
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r...    30   1.9  
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r...    30   1.9  
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r...    30   1.9  
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r...    30   1.9  
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re...    30   1.9  
gi|189083802 myosin VIIA isoform 2 [Homo sapiens]                      30   1.9  
gi|189083800 myosin VIIA isoform 3 [Homo sapiens]                      30   1.9  
gi|189083798 myosin VIIA isoform 1 [Homo sapiens]                      30   1.9  
gi|7662162 ALEX2 protein [Homo sapiens]                                30   1.9  
gi|29540562 ALEX2 protein [Homo sapiens]                               30   1.9  
gi|130980075 centromere protein J [Homo sapiens]                       30   3.3  
gi|38708321 INO80 complex homolog 1 [Homo sapiens]                     30   3.3  
gi|55749678 ninein-like [Homo sapiens]                                 29   4.3  
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]      29   4.3  
gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]     29   4.3  
gi|116875765 tight junction protein 1 isoform b [Homo sapiens]         29   5.6  
gi|116875767 tight junction protein 1 isoform a [Homo sapiens]         29   5.6  
gi|112363080 microtubule associated serine/threonine kinase 2 [H...    29   5.6  
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]             29   5.6  

>gi|59709436 tumor necrosis factor, alpha-induced protein 8-like 3
           [Homo sapiens]
          Length = 292

 Score =  580 bits (1494), Expect = e-166
 Identities = 292/292 (100%), Positives = 292/292 (100%)

Query: 1   MGKPRQNPSTLVSTLCEAEPKGKLWVNGYAGTQGTRDATLQTRLIPLSFHLQRGKGLAAP 60
           MGKPRQNPSTLVSTLCEAEPKGKLWVNGYAGTQGTRDATLQTRLIPLSFHLQRGKGLAAP
Sbjct: 1   MGKPRQNPSTLVSTLCEAEPKGKLWVNGYAGTQGTRDATLQTRLIPLSFHLQRGKGLAAP 60

Query: 61  LSALSAPRLPERPADGRVAVDAQPAARSMDSDSGEQSEGEPVTAAGPDVFSSKSLALQAQ 120
           LSALSAPRLPERPADGRVAVDAQPAARSMDSDSGEQSEGEPVTAAGPDVFSSKSLALQAQ
Sbjct: 61  LSALSAPRLPERPADGRVAVDAQPAARSMDSDSGEQSEGEPVTAAGPDVFSSKSLALQAQ 120

Query: 121 KKILSKIASKTVANMLIDDTSSEIFDELYKVTKEHTHNKKEAHKIMKDLIKVAIKIGILY 180
           KKILSKIASKTVANMLIDDTSSEIFDELYKVTKEHTHNKKEAHKIMKDLIKVAIKIGILY
Sbjct: 121 KKILSKIASKTVANMLIDDTSSEIFDELYKVTKEHTHNKKEAHKIMKDLIKVAIKIGILY 180

Query: 181 RNNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLHECKDLVHELVQRH 240
           RNNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLHECKDLVHELVQRH
Sbjct: 181 RNNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLHECKDLVHELVQRH 240

Query: 241 LTPRTHGRINHVFNHFADVEFLSTLYSLDGDCRPNLKRICEGINKLLDEKVL 292
           LTPRTHGRINHVFNHFADVEFLSTLYSLDGDCRPNLKRICEGINKLLDEKVL
Sbjct: 241 LTPRTHGRINHVFNHFADVEFLSTLYSLDGDCRPNLKRICEGINKLLDEKVL 292


>gi|117676365 tumor necrosis factor, alpha-induced protein 8 isoform
           a [Homo sapiens]
          Length = 198

 Score =  261 bits (666), Expect = 7e-70
 Identities = 118/194 (60%), Positives = 167/194 (86%)

Query: 97  SEGEPVTAAGPDVFSSKSLALQAQKKILSKIASKTVANMLIDDTSSEIFDELYKVTKEHT 156
           SE E       DVF+SK+LA+QAQKKIL K+ SK++A  LIDDTSSE+ DELY+VT+E+T
Sbjct: 3   SEAEESKEVATDVFNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYT 62

Query: 157 HNKKEAHKIMKDLIKVAIKIGILYRNNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYT 216
            NKKEA KI+K+LIK  IK+ ILYRNNQF+Q+EL ++EKF+KK++Q AMT+VSF++V+YT
Sbjct: 63  QNKKEAEKIIKNLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYT 122

Query: 217 FDRNVLSNLLHECKDLVHELVQRHLTPRTHGRINHVFNHFADVEFLSTLYSLDGDCRPNL 276
           FDRNVLS LL+EC++++H+++QRHLT ++HGR+N+VF+HF+D EFL+ LY+  G+ +P+L
Sbjct: 123 FDRNVLSRLLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHL 182

Query: 277 KRICEGINKLLDEK 290
           +++C+GINK+LDE+
Sbjct: 183 QKLCDGINKMLDEE 196


>gi|117676370 tumor necrosis factor, alpha-induced protein 8 isoform
           b [Homo sapiens]
          Length = 188

 Score =  258 bits (658), Expect = 6e-69
 Identities = 115/183 (62%), Positives = 164/183 (89%)

Query: 108 DVFSSKSLALQAQKKILSKIASKTVANMLIDDTSSEIFDELYKVTKEHTHNKKEAHKIMK 167
           DVF+SK+LA+QAQKKIL K+ SK++A  LIDDTSSE+ DELY+VT+E+T NKKEA KI+K
Sbjct: 4   DVFNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEKIIK 63

Query: 168 DLIKVAIKIGILYRNNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLH 227
           +LIK  IK+ ILYRNNQF+Q+EL ++EKF+KK++Q AMT+VSF++V+YTFDRNVLS LL+
Sbjct: 64  NLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLN 123

Query: 228 ECKDLVHELVQRHLTPRTHGRINHVFNHFADVEFLSTLYSLDGDCRPNLKRICEGINKLL 287
           EC++++H+++QRHLT ++HGR+N+VF+HF+D EFL+ LY+  G+ +P+L+++C+GINK+L
Sbjct: 124 ECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHLQKLCDGINKML 183

Query: 288 DEK 290
           DE+
Sbjct: 184 DEE 186


>gi|22748781 tumor necrosis factor, alpha-induced protein 8-like 1
           [Homo sapiens]
          Length = 186

 Score =  212 bits (539), Expect = 4e-55
 Identities = 101/182 (55%), Positives = 140/182 (76%)

Query: 108 DVFSSKSLALQAQKKILSKIASKTVANMLIDDTSSEIFDELYKVTKEHTHNKKEAHKIMK 167
           D FS+KSLALQAQKK+LSK+ASK V  +L+DDTSSE+ DELY+ T+E T ++KEA K++K
Sbjct: 2   DTFSTKSLALQAQKKLLSKMASKAVVAVLVDDTSSEVLDELYRATREFTRSRKEAQKMLK 61

Query: 168 DLIKVAIKIGILYRNNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLH 227
           +L+KVA+K+G+L R +Q   EEL ++ +FR +    AMT VSF++V++TFDR VL+  L 
Sbjct: 62  NLVKVALKLGLLLRGDQLGGEELALLRRFRHRARCLAMTAVSFHQVDFTFDRRVLAVGLL 121

Query: 228 ECKDLVHELVQRHLTPRTHGRINHVFNHFADVEFLSTLYSLDGDCRPNLKRICEGINKLL 287
           EC+DL+H+ V  HLT ++HGRINHVF H AD +FL+ LY      R +L+RICEG+ ++L
Sbjct: 122 ECRDLLHQAVGPHLTAKSHGRINHVFGHLADCDFLAALYGPAEPYRSHLRRICEGLGRML 181

Query: 288 DE 289
           DE
Sbjct: 182 DE 183


>gi|157389001 tumor necrosis factor, alpha-induced protein 8-like 2
           [Homo sapiens]
          Length = 184

 Score =  209 bits (533), Expect = 2e-54
 Identities = 100/180 (55%), Positives = 142/180 (78%), Gaps = 2/180 (1%)

Query: 110 FSSKSLALQAQKKILSKIASKTVANMLIDDTSSEIFDELYKVTKEHTHNKKEAHKIMKDL 169
           FSSKSLALQA+KK+LSK+A ++VA++ ID+TSSE+ DELY+V+KE+TH++ +A +++KDL
Sbjct: 4   FSSKSLALQAEKKLLSKMAGRSVAHLFIDETSSEVLDELYRVSKEYTHSRPQAQRVIKDL 63

Query: 170 IKVAIKIGILYRNNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLHEC 229
           IKVAIK+ +L+RN  F   EL +  +FR+KL Q AMT +SF EV++TF+  VL+ LL EC
Sbjct: 64  IKVAIKVAVLHRNGSFGPSELALATRFRQKLRQGAMTALSFGEVDFTFEAAVLAGLLTEC 123

Query: 230 KDLVHELVQRHLTPRTHGRINHVFNHFADVEFLSTLYSLDGDCRPNLKRICEGINKLLDE 289
           +D++ ELV+ HLTP++HGRI HVF+HF+D   L+ LY    D   +L +IC+G+ KLLDE
Sbjct: 124 RDVLLELVEHHLTPKSHGRIRHVFDHFSDPGLLTALYG--PDFTQHLGKICDGLRKLLDE 181


>gi|100814339 coiled-coil domain containing 146 [Homo sapiens]
          Length = 955

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 12/130 (9%)

Query: 119 AQKKILSKIASKTVANMLIDDTS--------SEIFDELYKVTKEHTHNKKEAHKIMKDLI 170
           AQ+KI+S++ SK V   L ++           E+   L ++T+     K++  K   D +
Sbjct: 421 AQQKIISEMESKLVEQQLAEENKLLKEQENMKELVVNLLRMTQIKIDEKEQKSK---DFL 477

Query: 171 KVAIKIGILYRNNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLHECK 230
           K   K   + +  +    E+ I +K + ++ +        Y+     +RN   NLLH+  
Sbjct: 478 KAQQKYTNIVKEMKAKDLEIRIHKKKKCEIYRRLREFAKLYDTIRN-ERNKFVNLLHKAH 536

Query: 231 DLVHELVQRH 240
             V+E+ +RH
Sbjct: 537 QKVNEIKERH 546


>gi|4758648 kinesin family member 5B [Homo sapiens]
          Length = 963

 Score = 35.0 bits (79), Expect = 0.078
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 8/77 (10%)

Query: 140 TSSEIFDELYKVTKEHTHNKKEAHKIMKDLIKVAIKIGILYRNNQFSQ--------EELV 191
           T + I  EL K+ +   H KK A ++M  L+K   +IGI   NN   Q        EE  
Sbjct: 529 TLASIDAELQKLKEMTNHQKKRAAEMMASLLKDLAEIGIAVGNNDVKQPEGTGMIDEEFT 588

Query: 192 IVEKFRKKLNQTAMTIV 208
           +   +  K+     T+V
Sbjct: 589 VARLYISKMKSEVKTMV 605


>gi|153791839 sodium channel associated protein 1 [Homo sapiens]
          Length = 688

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 21/155 (13%)

Query: 103 TAAGPDVFSSKSLALQAQKKILSKIASKTVANMLIDDTSSEIFDELYKVTKEHT------ 156
           T  G D+++        Q+++      KT A  L    S E+ D L+K+ +EH       
Sbjct: 117 TEVGTDIYADDETVRNLQEQLQLANQEKTQAVELWQTVSQEL-DRLHKLYQEHMTEAQIH 175

Query: 157 --HNKKEAHKIMKDLIKVAIKIGILYRNNQFSQ--------EELVIVEKFRKKLNQTAMT 206
              ++K+  ++  D  ++  ++ +   N + +         E+ VI+E+ RKKL Q  + 
Sbjct: 176 VFESQKQKDQLF-DFQQLTKQLHVTNENMEVTNQQFLKTVTEQSVIIEQLRKKLRQAKLE 234

Query: 207 I-VSFYEVEYTFDRNVLSNLLHECKDLVHELVQRH 240
           + V+  +VE     NV  +L  + K    ++V  H
Sbjct: 235 LRVAVAKVEEL--TNVTEDLQGQMKKKEKDVVSAH 267


>gi|16418451 hypothetical protein LOC116328 [Homo sapiens]
          Length = 427

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 5/99 (5%)

Query: 71  ERPADGRVAVDAQPAARSMDSDSGEQSEGEPVTAAGPDVFSSKSLALQAQKKILSKIASK 130
           E  AD   A   QP      +D  E SE    + AG      K+  L+ Q++   K+   
Sbjct: 167 ENDADPLAAEMLQPPIPRSKNDQWE-SEDSGSSPAGSLKMEPKNKGLKQQQQQHKKL--- 222

Query: 131 TVANMLIDDTSSEIFDELYKVTKEHTHNKKEAHKIMKDL 169
            +A ML  D+   I      VT+E   N+ +A ++++DL
Sbjct: 223 -LAAMLSQDSFESIHSPTPSVTEEDIDNEDDAMELLEDL 260


>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform A [Homo sapiens]
          Length = 1679

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 37  DATLQTRLIPLS-FHLQRGKGLAAPLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGE 95
           D T Q   +P+   H++ GK     L+   AP+  +  A   +    + A RS   +SG 
Sbjct: 607 DETSQMSDLPVKVIHVESGK----ILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS 662

Query: 96  QSEGEPVTAAGPDVFSSKSLALQAQKKIL---SKIASKTVANMLIDDTSSEIFDE 147
           + E E      P      +L ++ +KKI    S   S+  A  +I++   ++ DE
Sbjct: 663 EEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDE 717


>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform F [Homo sapiens]
          Length = 1613

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 37  DATLQTRLIPLS-FHLQRGKGLAAPLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGE 95
           D T Q   +P+   H++ GK     L+   AP+  +  A   +    + A RS   +SG 
Sbjct: 607 DETSQMSDLPVKVIHVESGK----ILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS 662

Query: 96  QSEGEPVTAAGPDVFSSKSLALQAQKKIL---SKIASKTVANMLIDDTSSEIFDE 147
           + E E      P      +L ++ +KKI    S   S+  A  +I++   ++ DE
Sbjct: 663 EEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDE 717


>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform E [Homo sapiens]
          Length = 1614

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 37  DATLQTRLIPLS-FHLQRGKGLAAPLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGE 95
           D T Q   +P+   H++ GK     L+   AP+  +  A   +    + A RS   +SG 
Sbjct: 607 DETSQMSDLPVKVIHVESGK----ILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS 662

Query: 96  QSEGEPVTAAGPDVFSSKSLALQAQKKIL---SKIASKTVANMLIDDTSSEIFDE 147
           + E E      P      +L ++ +KKI    S   S+  A  +I++   ++ DE
Sbjct: 663 EEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDE 717


>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform D [Homo sapiens]
          Length = 1616

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 37  DATLQTRLIPLS-FHLQRGKGLAAPLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGE 95
           D T Q   +P+   H++ GK     L+   AP+  +  A   +    + A RS   +SG 
Sbjct: 607 DETSQMSDLPVKVIHVESGK----ILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS 662

Query: 96  QSEGEPVTAAGPDVFSSKSLALQAQKKIL---SKIASKTVANMLIDDTSSEIFDE 147
           + E E      P      +L ++ +KKI    S   S+  A  +I++   ++ DE
Sbjct: 663 EEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDE 717


>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform C [Homo sapiens]
          Length = 1617

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 37  DATLQTRLIPLS-FHLQRGKGLAAPLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGE 95
           D T Q   +P+   H++ GK     L+   AP+  +  A   +    + A RS   +SG 
Sbjct: 607 DETSQMSDLPVKVIHVESGK----ILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS 662

Query: 96  QSEGEPVTAAGPDVFSSKSLALQAQKKIL---SKIASKTVANMLIDDTSSEIFDE 147
           + E E      P      +L ++ +KKI    S   S+  A  +I++   ++ DE
Sbjct: 663 EEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDE 717


>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 37  DATLQTRLIPLS-FHLQRGKGLAAPLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGE 95
           D T Q   +P+   H++ GK     L+   AP+  +  A   +    + A RS   +SG 
Sbjct: 607 DETSQMSDLPVKVIHVESGK----ILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS 662

Query: 96  QSEGEPVTAAGPDVFSSKSLALQAQKKIL---SKIASKTVANMLIDDTSSEIFDE 147
           + E E      P      +L ++ +KKI    S   S+  A  +I++   ++ DE
Sbjct: 663 EEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDE 717


>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 37  DATLQTRLIPLS-FHLQRGKGLAAPLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGE 95
           D T Q   +P+   H++ GK     L+   AP+  +  A   +    + A RS   +SG 
Sbjct: 607 DETSQMSDLPVKVIHVESGK----ILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS 662

Query: 96  QSEGEPVTAAGPDVFSSKSLALQAQKKIL---SKIASKTVANMLIDDTSSEIFDE 147
           + E E      P      +L ++ +KKI    S   S+  A  +I++   ++ DE
Sbjct: 663 EEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDE 717


>gi|189083802 myosin VIIA isoform 2 [Homo sapiens]
          Length = 2175

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 205 MTIVSFYEVEYTFDRNVLSNLLHECKDLVHELVQRHLTPRTHGRINHVFNHFADVEFLST 264
           M I+S  + E  F +   + +LH+     H+L   ++ P+ +       NHFA + +  T
Sbjct: 504 MNIISLIDEESKFPKGTDTTMLHKLNSQ-HKLNANYIPPKNNHETQFGINHFAGIVYYET 562


>gi|189083800 myosin VIIA isoform 3 [Homo sapiens]
          Length = 1204

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 205 MTIVSFYEVEYTFDRNVLSNLLHECKDLVHELVQRHLTPRTHGRINHVFNHFADVEFLST 264
           M I+S  + E  F +   + +LH+     H+L   ++ P+ +       NHFA + +  T
Sbjct: 504 MNIISLIDEESKFPKGTDTTMLHKLNSQ-HKLNANYIPPKNNHETQFGINHFAGIVYYET 562


>gi|189083798 myosin VIIA isoform 1 [Homo sapiens]
          Length = 2215

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 205 MTIVSFYEVEYTFDRNVLSNLLHECKDLVHELVQRHLTPRTHGRINHVFNHFADVEFLST 264
           M I+S  + E  F +   + +LH+     H+L   ++ P+ +       NHFA + +  T
Sbjct: 504 MNIISLIDEESKFPKGTDTTMLHKLNSQ-HKLNANYIPPKNNHETQFGINHFAGIVYYET 562


>gi|7662162 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 54  GKGLAAPLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGEQ--SEGEPVTAAGPDVFS 111
           G G+AAP     AP +          V A P   +  + + E   + G P TA  P   +
Sbjct: 196 GPGVAAPTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSA 255

Query: 112 SKSLALQAQKKILSKIASKTVA 133
           +K     A    + K  S T A
Sbjct: 256 AKKATPGAHTGAIPKATSATGA 277


>gi|29540562 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 54  GKGLAAPLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGEQ--SEGEPVTAAGPDVFS 111
           G G+AAP     AP +          V A P   +  + + E   + G P TA  P   +
Sbjct: 196 GPGVAAPTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSA 255

Query: 112 SKSLALQAQKKILSKIASKTVA 133
           +K     A    + K  S T A
Sbjct: 256 AKKATPGAHTGAIPKATSATGA 277


>gi|130980075 centromere protein J [Homo sapiens]
          Length = 1338

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 18/181 (9%)

Query: 36   RDATLQTRLIPLSFHLQRGKGLAAPLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGE 95
            R   L+ ++I L   +++ K   A L+ L               ++ + A   +  +  +
Sbjct: 902  RSQVLREKIIELETEIEKFKAENASLAKLR--------------IERESALEKLRKEIAD 947

Query: 96   QSEGEPVTAAGPDVFSSKSLA-LQAQKKILSKIASKTVANMLIDDTSSEIFDELYKVTKE 154
              + +    A  + F  + +  LQ ++K+  K    T A    D    E    L +   +
Sbjct: 948  FEQQKAKELARIEEFKKEEMRKLQKERKVFEKYT--TAARTFPDKKEREEIQTLKQQIAD 1005

Query: 155  HTHN-KKEAHKIMKDLIKVAIKIGILYRNNQFSQEELVIVEKFRKKLNQTAMTIVSFYEV 213
               + K++  K      ++  +I +L R N   +EE+ ++E+FR    + A  I S  EV
Sbjct: 1006 LREDLKRKETKWSSTHSRLRSQIQMLVRENTDLREEIKVMERFRLDAWKRAEAIESSLEV 1065

Query: 214  E 214
            E
Sbjct: 1066 E 1066


>gi|38708321 INO80 complex homolog 1 [Homo sapiens]
          Length = 1556

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 10/112 (8%)

Query: 65  SAPRLPERPADGRVAVDAQPAARSMDSDSGEQSEGEPVTAAGPDVFSSKSLALQAQKKIL 124
           S P LP+   D  + V  +P    +   SG  S G   T +   V  S+S   +      
Sbjct: 58  SNPLLPQS-GDPLIQVKEEPPNSLLGETSGAGSSGMLNTYSLNGVLQSESKCDKGNLYNF 116

Query: 125 SKI--ASKTVANMLIDDTSSEIF-------DELYKVTKEHTHNKKEAHKIMK 167
           SK+  + K + ++L+ D SSE         +E   +++E  HN    HK  K
Sbjct: 117 SKLKKSRKWLKSILLSDESSEADSQSEDDDEEELNLSREELHNMLRLHKYKK 168


>gi|55749678 ninein-like [Homo sapiens]
          Length = 1382

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 19/73 (26%), Positives = 32/73 (43%)

Query: 134  NMLIDDTSSEIFDELYKVTKEHTHNKKEAHKIMKDLIKVAIKIGILYRNNQFSQEELVIV 193
            N L+ +    +  EL      H   +KE   + KD  K   ++ +L R NQ  +++L  +
Sbjct: 1093 NTLLKNDLGRVRQELEAAESTHDAQRKEIEVLKKDKEKACSEMEVLNRQNQNYKDQLSQL 1152

Query: 194  EKFRKKLNQTAMT 206
                 +L Q A T
Sbjct: 1153 NVRVLQLGQEAST 1165


>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
          Length = 1630

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 11/87 (12%)

Query: 34  GTRDATLQTRLIPLS------FHLQRGKGLAAPLSALSAPRLPERPADGRV----AVDAQ 83
           GTRD+  QT  I ++         QRG+ +AA LS  SA  +      G      AV ++
Sbjct: 422 GTRDSECQTEDILIAAPSRRRIRAQRGQSIAASLSH-SAGNISALADKGDTMFTPAVSSR 480

Query: 84  PAARSMDSDSGEQSEGEPVTAAGPDVF 110
             +RS+  +     + EP   A P  +
Sbjct: 481 TRSRSLPREGNRGGDAEPKVGAKPSAY 507


>gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]
          Length = 1474

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 11/87 (12%)

Query: 34  GTRDATLQTRLIPLS------FHLQRGKGLAAPLSALSAPRLPERPADGRV----AVDAQ 83
           GTRD+  QT  I ++         QRG+ +AA LS  SA  +      G      AV ++
Sbjct: 266 GTRDSECQTEDILIAAPSRRRIRAQRGQSIAASLSH-SAGNISALADKGDTMFTPAVSSR 324

Query: 84  PAARSMDSDSGEQSEGEPVTAAGPDVF 110
             +RS+  +     + EP   A P  +
Sbjct: 325 TRSRSLPREGNRGGDAEPKVGAKPSAY 351


>gi|116875765 tight junction protein 1 isoform b [Homo sapiens]
          Length = 1668

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 59   APLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGEQSEGEPVTAAGPDVFSSK 113
            APLS  S PR  + P    +  + QPA    D+    + E +P  +AGP    SK
Sbjct: 1056 APLSYDSRPRYEQAPRASALRHEEQPAP-GYDTHGRLRPEAQPHPSAGPKPAESK 1109


>gi|116875767 tight junction protein 1 isoform a [Homo sapiens]
          Length = 1748

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 59   APLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGEQSEGEPVTAAGPDVFSSK 113
            APLS  S PR  + P    +  + QPA    D+    + E +P  +AGP    SK
Sbjct: 1136 APLSYDSRPRYEQAPRASALRHEEQPAP-GYDTHGRLRPEAQPHPSAGPKPAESK 1189


>gi|112363080 microtubule associated serine/threonine kinase 2 [Homo
            sapiens]
          Length = 1798

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 6/77 (7%)

Query: 54   GKGLAAPLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGEQSEGEPVTAAGPDVFSSK 113
            GKG+  P  + +   L +  A+ R ++  Q A R +DS   +  EG P  + G     ++
Sbjct: 1466 GKGVLQPAPSRALGTLRQDRAERRESLQKQEAIREVDSSEDDTEEG-PENSQG-----AQ 1519

Query: 114  SLALQAQKKILSKIASK 130
             L+L    ++   +A K
Sbjct: 1520 ELSLAPHPEVSQSVAPK 1536


>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
          Length = 1411

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 8/130 (6%)

Query: 108 DVFSSKSLALQAQKKILSKIASKTVANMLIDDTSSEIFDELYKVTK-EHTHNKKEAHKIM 166
           ++ SS  L LQ + + L  I  K            + F+ L + TK +H          +
Sbjct: 779 EIVSSTRLDLQKKSEALESIKQKLTKQEEEKQILKQDFETLSQETKIQHEELNNRIQTTV 838

Query: 167 KDLIKVAIKIGILYRNNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLL 226
            +L KV ++   L         EL  V+    K++ +     S +E E    +  + +L 
Sbjct: 839 TELQKVKMEKEAL-------MTELSTVKDKLSKVSDSLKNSKSEFEKENQKGKAAILDLE 891

Query: 227 HECKDLVHEL 236
             CK+L H+L
Sbjct: 892 KTCKELKHQL 901


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.132    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,720,929
Number of Sequences: 37866
Number of extensions: 463080
Number of successful extensions: 1834
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1820
Number of HSP's gapped (non-prelim): 52
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.