Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GPR148 Sequence: fasta or formatted (347aa) NCBI GI: 46409360
Description:

G protein-coupled receptor 148

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         33           3
 C cysteine            2.9         10           2
 D aspartate           2.0          7           1
 E glutamate           2.0          7           2
 F phenylalanine       2.9         10           1
 G glycine             6.1         21           2
 H histidine           3.2         11           2
 I isoleucine          6.6         23           1
 K lysine              1.2          4           1
 L leucine            17.9         62           3
 M methionine          3.5         12           2
 N asparagine          1.4          5           1
 P proline             5.2         18           2
 Q glutamine           3.2         11           1
 R arginine            4.6         16           2
 S serine              8.6         30           4
 T threonine           6.9         24           2
 V valine              5.5         19           2
 W tryptophan          2.9         10           1
 Y tyrosine            4.0         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 148 
HTR1B                 0.070   5-hydroxytryptamine (serotonin) receptor 1B 
HTR1D                 0.064   5-hydroxytryptamine (serotonin) receptor 1D 
HTR5A                 0.058   5-hydroxytryptamine receptor 5A 
ADRA1D                0.055   alpha-1D-adrenergic receptor 
ADRB3                 0.052   adrenergic, beta-3-, receptor 
CHRM1                 0.050   cholinergic receptor, muscarinic 1 
ADRA1B                0.047   alpha-1B-adrenergic receptor 
HTR6                  0.044   5-hydroxytryptamine (serotonin) receptor 6 
HTR1A                 0.044   5-hydroxytryptamine (serotonin) receptor 1A 
SSTR5                 0.041   somatostatin receptor 5 
ADRB1                 0.041   beta-1-adrenergic receptor 
ADRA1A                0.040   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.040   alpha-1A-adrenergic receptor isoform 1 
ADRA1A                0.040   alpha-1A-adrenergic receptor isoform 2 
ADRA1A                0.040   alpha-1A-adrenergic receptor isoform 3 
HTR1F                 0.040   5-hydroxytryptamine (serotonin) receptor 1F 
NPY1R                 0.040   neuropeptide Y receptor Y1 
GPR101                0.040   G protein-coupled receptor 101 
CHRM3                 0.040   cholinergic receptor, muscarinic 3 
HTR7                  0.038   5-hydroxytryptamine receptor 7 isoform b 
HTR7                  0.038   5-hydroxytryptamine receptor 7 isoform d 
HTR7                  0.038   5-hydroxytryptamine receptor 7 isoform a 
HTR2C                 0.037   5-hydroxytryptamine (serotonin) receptor 2C 
GPR61                 0.036   G protein-coupled receptor 61 
P2RY6                 0.036   pyrimidinergic receptor P2Y6 
P2RY6                 0.036   pyrimidinergic receptor P2Y6 
P2RY6                 0.036   pyrimidinergic receptor P2Y6 
P2RY6                 0.036   pyrimidinergic receptor P2Y6 
OPN4                  0.036   opsin 4 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press