Search of human proteins with 57528437

Search of human proteins with 57528437

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|57528437 ladybird homeobox 2 [Homo sapiens]
         (194 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|57528437 ladybird homeobox 2 [Homo sapiens]                        396   e-111
gi|63054872 ladybird homeobox 1 [Homo sapiens]                        119   2e-27
gi|4758090 NK2 transcription factor related, locus 5 [Homo sapiens]    82   2e-16
gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]                   79   2e-15
gi|210147470 NK2 transcription factor related, locus 6 [Homo sap...    75   3e-14
gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens]                  74   8e-14
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]                   72   3e-13
gi|4504465 homeobox B2 [Homo sapiens]                                  71   7e-13
gi|153218470 BarH-like homeobox 1 [Homo sapiens]                       70   9e-13
gi|31377777 NK2 homeobox 8 [Homo sapiens]                              70   1e-12
gi|116805350 homeo box (H6 family) 1 [Homo sapiens]                    69   2e-12
gi|14149728 BarH-like homeobox 1 [Homo sapiens]                        69   3e-12
gi|148746211 NK2 transcription factor related, locus 3 [Homo sap...    68   6e-12
gi|149588930 gastrulation brain homeo box 1 [Homo sapiens]             68   6e-12
gi|4557673 pancreatic and duodenal homeobox 1 [Homo sapiens]           67   1e-11
gi|148613882 homeobox A4 [Homo sapiens]                                67   1e-11
gi|4505401 NK2 transcription factor related, locus 2 [Homo sapiens]    67   1e-11
gi|147901462 brain specific homeobox [Homo sapiens]                    67   1e-11
gi|45593144 gastrulation brain homeo box 2 [Homo sapiens]              67   1e-11
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]                  66   2e-11
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]                66   2e-11
gi|94536800 empty spiracles homolog 1 [Homo sapiens]                   66   2e-11
gi|118582284 msh homeobox 1 [Homo sapiens]                             65   3e-11
gi|89257348 homeo box HB9 [Homo sapiens]                               65   3e-11
gi|6633798 BarH-like homeobox 2 [Homo sapiens]                         65   3e-11
gi|4502365 NK3 homeobox 2 [Homo sapiens]                               65   3e-11
gi|70608170 H6 family homeobox 2 [Homo sapiens]                        65   4e-11
gi|157743259 H6 family homeobox 3 [Homo sapiens]                       65   4e-11
gi|23397672 homeobox D4 [Homo sapiens]                                 65   5e-11
gi|39930383 BarH-like homeobox 2 [Homo sapiens]                        65   5e-11

>gi|57528437 ladybird homeobox 2 [Homo sapiens]
          Length = 194

 Score =  396 bits (1017), Expect = e-111
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MGKRTSLEVSLGELGGEKCRGGRRSFPPLAASRPARPGGWRWARRDLCKTASRAENNSQA 60
           MGKRTSLEVSLGELGGEKCRGGRRSFPPLAASRPARPGGWRWARRDLCKTASRAENNSQA
Sbjct: 1   MGKRTSLEVSLGELGGEKCRGGRRSFPPLAASRPARPGGWRWARRDLCKTASRAENNSQA 60

Query: 61  CRPQRRAGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGL 120
           CRPQRRAGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGL
Sbjct: 61  CRPQRRAGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGL 120

Query: 121 ANAQVVTWFQNRRAKLKRDVEEMRADVASLRALSPEVLCSLALPEGAPDPGLCLGPAGPD 180
           ANAQVVTWFQNRRAKLKRDVEEMRADVASLRALSPEVLCSLALPEGAPDPGLCLGPAGPD
Sbjct: 121 ANAQVVTWFQNRRAKLKRDVEEMRADVASLRALSPEVLCSLALPEGAPDPGLCLGPAGPD 180

Query: 181 SRPHLSDEEIQVDD 194
           SRPHLSDEEIQVDD
Sbjct: 181 SRPHLSDEEIQVDD 194


>gi|63054872 ladybird homeobox 1 [Homo sapiens]
          Length = 281

 Score =  119 bits (298), Expect = 2e-27
 Identities = 78/172 (45%), Positives = 92/172 (53%), Gaps = 43/172 (25%)

Query: 66  RAGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQV 125
           R G    G     +KRRKSRTAFT  Q+ ELE+RF++QKYL+P++RD +A +LGL NAQV
Sbjct: 110 RDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQV 169

Query: 126 VTWFQNRRAKLKRDVEEMRADVASLRALSPE------VLCSL------------------ 161
           +TWFQNRRAKLKRD+EEM+ADV S + L P        L  L                  
Sbjct: 170 ITWFQNRRAKLKRDLEEMKADVESAKKLGPSGQMDIVALAELEQNSEATAGGGGGCGRAK 229

Query: 162 ------ALPEGAPD-PG---LCLGPAGP---------DSRPHLSDEEIQVDD 194
                  LP GAP  PG   L L PA P         D      DEEI VDD
Sbjct: 230 SRPGSPVLPPGAPKAPGAGALQLSPASPLTDQPASSQDCSEDEEDEEIDVDD 281


>gi|4758090 NK2 transcription factor related, locus 5 [Homo sapiens]
          Length = 324

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 56/156 (35%), Positives = 76/156 (48%), Gaps = 11/156 (7%)

Query: 25  SFPPLAASRPARPGGWRWARRDLCKTASRAE-NNSQACRPQRRAGPDALGPGPFGRKRRK 83
           +F P A S P      R  +++LC      E   ++A   +R          P  R+RRK
Sbjct: 91  AFYPRAYSDPDPAKDPRAEKKELCALQKAVELEKTEADNAER----------PRARRRRK 140

Query: 84  SRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEEM 143
            R  F+  QV ELERRF  Q+YL+  ERD LA+ L L + QV  WFQNRR K KR  ++ 
Sbjct: 141 PRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQ 200

Query: 144 RADVASLRALSPEVLCSLALPEGAPDPGLCLGPAGP 179
             ++  L    P     +A+P    D   CLG + P
Sbjct: 201 TLELVGLPPPPPPPARRIAVPVLVRDGKPCLGDSAP 236


>gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]
          Length = 284

 Score = 79.0 bits (193), Expect = 2e-15
 Identities = 63/173 (36%), Positives = 76/173 (43%), Gaps = 35/173 (20%)

Query: 27  PPLAASRPARPG--------------------GWRWARRDLCKTASRAENNSQACRPQRR 66
           PP A   PA PG                    G R+A+  L    S      +   P + 
Sbjct: 92  PPPAGGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRFAKDRLTAALSPFSGTRRIGHPYQN 151

Query: 67  AGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVV 126
             P          KR+K RT+F+  QVLELERRF+ QKYLA +ER  LA  L + +AQV 
Sbjct: 152 RTPP---------KRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVK 202

Query: 127 TWFQNRRAKLKRDVEEMRADVAS-----LRALSPEVLCSLALPEGAPDPGLCL 174
           TWFQNRR K +R   E R          L  L  + L     P   PDP LCL
Sbjct: 203 TWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALPRPLRPPLPPDP-LCL 254


>gi|210147470 NK2 transcription factor related, locus 6 [Homo
           sapiens]
          Length = 219

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 5/104 (4%)

Query: 76  PFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAK 135
           P  R+RRK R  F+  QVL LERRF  Q+YL+  ER+ LA+ L L + QV  WFQNRR K
Sbjct: 45  PKARQRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVKIWFQNRRYK 104

Query: 136 LKRDVEEMRADVASLRALSPEVLCSLALPEGAPDPGLCLGPAGP 179
            KR  ++   ++A        V   + + +G P    CLGP GP
Sbjct: 105 CKRQRQDKSLELAGHPLTPRRVAVPVLVRDGKP----CLGP-GP 143


>gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens]
          Length = 291

 Score = 73.9 bits (180), Expect = 8e-14
 Identities = 52/130 (40%), Positives = 64/130 (49%), Gaps = 14/130 (10%)

Query: 27  PPLAASRPARP--------GG----WRWARRDLCKTASRAENNSQACRPQRRAGPDALGP 74
           PPL ++ PA P        GG    W  + R   K    A          RR G      
Sbjct: 102 PPLPSALPAMPSVPTVSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNR 161

Query: 75  GPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRA 134
            P   KR+K RT+F+  Q+ ELE+RF  QKYLA +ER  LA  L + +AQV TWFQNRR 
Sbjct: 162 TP--PKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRT 219

Query: 135 KLKRDVEEMR 144
           K +R   E R
Sbjct: 220 KWRRQTAEER 229


>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
          Length = 330

 Score = 72.0 bits (175), Expect = 3e-13
 Identities = 36/65 (55%), Positives = 45/65 (69%)

Query: 80  KRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRD 139
           K++K RT+FT  Q+ ELE+RF  QKYLA +ER  LA  L + +AQV TWFQNRR K +R 
Sbjct: 200 KKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQ 259

Query: 140 VEEMR 144
             E R
Sbjct: 260 TAEER 264


>gi|4504465 homeobox B2 [Homo sapiens]
          Length = 356

 Score = 70.9 bits (172), Expect = 7e-13
 Identities = 47/120 (39%), Positives = 59/120 (49%), Gaps = 5/120 (4%)

Query: 27  PPLAASRPARPGGWRWARRDLCKTASRAENNSQACRPQRRAG----PDALG-PGPFGRKR 81
           PPL A+ PA    W   ++   K +  A + S A      +G     D LG P   G   
Sbjct: 84  PPLPAAPPAPEFPWMKEKKSAKKPSQSATSPSPAASAVPASGVGSPADGLGLPEAGGGGA 143

Query: 82  RKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVE 141
           R+ RTA+T  Q+LELE+ F F KYL    R  +A  L L   QV  WFQNRR K KR  +
Sbjct: 144 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203


>gi|153218470 BarH-like homeobox 1 [Homo sapiens]
          Length = 254

 Score = 70.5 bits (171), Expect = 9e-13
 Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 3/80 (3%)

Query: 64  QRRAGPDALGPGPFG---RKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGL 120
           Q R   +A GPG  G   +K R+SRT FT  Q++ LE+RF  QKYL+  +R  LA  LGL
Sbjct: 122 QLRGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGL 181

Query: 121 ANAQVVTWFQNRRAKLKRDV 140
           +  QV TW+QNRR K K+ V
Sbjct: 182 SQLQVKTWYQNRRMKWKKIV 201


>gi|31377777 NK2 homeobox 8 [Homo sapiens]
          Length = 239

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 52/160 (32%), Positives = 70/160 (43%), Gaps = 5/160 (3%)

Query: 24  RSFPPLAASRPARPGGWRWARRDLCKTASRAENNSQACRPQRRAGPDALGPGPFGRKRRK 83
           R  P   A +P     W  + R    ++  +   +      +R       PG    KR+K
Sbjct: 27  RREPEPRAPQPDPCAAWLDSERGHYPSSDESSLETSPPDSSQRPSARPASPGSDAEKRKK 86

Query: 84  SRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEEM 143
            R  F+  Q LELERRF  Q+YL+  ER+ LA+ L L   QV  WFQN R KLKR     
Sbjct: 87  RRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLKRARAPG 146

Query: 144 RADVASLRA-----LSPEVLCSLALPEGAPDPGLCLGPAG 178
            A+   L A      +P +L  + +P    D   C G  G
Sbjct: 147 AAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGGG 186


>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
          Length = 348

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 52/148 (35%), Positives = 67/148 (45%), Gaps = 16/148 (10%)

Query: 51  ASRAENNSQACRPQRRAGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSE 110
           A+  E  S+       AG    G G  G +++K+RT F+  QV +LE  F  ++YL+ +E
Sbjct: 173 AAGTEEASELAEVPAAAGETRGGVGVGGGRKKKTRTVFSRSQVFQLESTFDLKRYLSSAE 232

Query: 111 RDGLATRLGLANAQVVTWFQNRRAKLKRDV-EEMRA------------DVASLRALSPEV 157
           R GLA  L L   QV  WFQNRR K KR +  E+ A             V  L   SP  
Sbjct: 233 RAGLAASLQLTETQVKIWFQNRRNKWKRQLAAELEAASLSPPGAQRLVRVPVLYHESPPA 292

Query: 158 LCSLALPEGAPDPGLCLGPAGPDSRPHL 185
             +   P   P P   L PA P   P L
Sbjct: 293 AAAAGPPATLPFP---LAPAAPAPPPPL 317


>gi|14149728 BarH-like homeobox 1 [Homo sapiens]
          Length = 327

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 45/111 (40%), Positives = 58/111 (52%), Gaps = 10/111 (9%)

Query: 79  RKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKR 138
           +K RK+RTAFT  Q+ +LER F  QKYL+  +R  LA  L L + QV TW+QNRR K KR
Sbjct: 176 KKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKR 235

Query: 139 DVE---EMRADVASLRALSPEVLCSLALPEGAP---DPGLCL----GPAGP 179
                 E+ A+  +  AL          P+      DPG  L    GP+ P
Sbjct: 236 QTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAP 286


>gi|148746211 NK2 transcription factor related, locus 3 [Homo
           sapiens]
          Length = 364

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 35/74 (47%), Positives = 46/74 (62%)

Query: 76  PFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAK 135
           P  R RRK R  F+  QV ELERRF  Q+YL+  ER+ LA+ L L + QV  WFQNRR K
Sbjct: 143 PKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYK 202

Query: 136 LKRDVEEMRADVAS 149
            KR  ++   ++ +
Sbjct: 203 CKRQRQDKSLELGA 216


>gi|149588930 gastrulation brain homeo box 1 [Homo sapiens]
          Length = 363

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 34/61 (55%), Positives = 44/61 (72%)

Query: 78  GRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLK 137
           G K R+ RTAFT++Q+LELE+ F  +KYL+ +ER  +A  L L+  QV  WFQNRRAK K
Sbjct: 258 GGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 317

Query: 138 R 138
           R
Sbjct: 318 R 318


>gi|4557673 pancreatic and duodenal homeobox 1 [Homo sapiens]
          Length = 283

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 11/110 (10%)

Query: 80  KRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRD 139
           + +++RTA+T  Q+LELE+ F+F KY++   R  LA  L L    +  WFQNRR K K++
Sbjct: 145 ENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKE 204

Query: 140 VEEMRAD---VASLRALSPEVLCS-------LALPEGAPDPGLCLGPAGP 179
            ++ R     V       PE  C+       LALP   P PG  + PA P
Sbjct: 205 EDKKRGGGTAVGGGGVAEPEQDCAVTSGEELLALPP-PPPPGGAVPPAAP 253


>gi|148613882 homeobox A4 [Homo sapiens]
          Length = 320

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 15/162 (9%)

Query: 24  RSFPPLAASR----PARPGGWRWARRDLCKT--ASRAENNSQACRP-----QRRAGPDAL 72
           R+ PP A  R    PA PG         C    A ++    +   P      ++    A+
Sbjct: 147 RAVPPAAPRRCEAAPATPGVPAGGSAPACPLLLADKSPLGLKGKEPVVYPWMKKIHVSAV 206

Query: 73  GPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNR 132
            P   G + ++SRTA+T QQVLELE+ F F +YL    R  +A  L L+  QV  WFQNR
Sbjct: 207 NPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNR 266

Query: 133 RAKLKRDVE----EMRADVASLRALSPEVLCSLALPEGAPDP 170
           R K K+D +    +MR+  ++  +  P        P   P P
Sbjct: 267 RMKWKKDHKLPNTKMRSSNSASASAGPPGKAQTQSPHLHPHP 308


>gi|4505401 NK2 transcription factor related, locus 2 [Homo sapiens]
          Length = 273

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 4/116 (3%)

Query: 39  GWRWARRDLCKTASRAENNSQACRPQRRAGPD----ALGPGPFGRKRRKSRTAFTAQQVL 94
           G +++   L   A   +++S++  P     PD      G G    K+RK R  F+  Q  
Sbjct: 82  GLQYSLHGLAAGAPPQDSSSKSPEPSADESPDNDKETPGGGGDAGKKRKRRVLFSKAQTY 141

Query: 95  ELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEEMRADVASL 150
           ELERRF  Q+YL+  ER+ LA+ + L   QV  WFQN R K+KR   E   +V  L
Sbjct: 142 ELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARAEKGMEVTPL 197


>gi|147901462 brain specific homeobox [Homo sapiens]
          Length = 233

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 8/89 (8%)

Query: 80  KRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRD 139
           +RRK+RT F+  Q+  LE+RF  Q+YL+  ER  LAT L L+  QV TWFQNRR K K+ 
Sbjct: 109 RRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQ 168

Query: 140 VEEMRADVASLRALSPEVLCSLALPEGAP 168
           + + + +        P+       PEG+P
Sbjct: 169 LRKSQDE--------PKAPDGPESPEGSP 189


>gi|45593144 gastrulation brain homeo box 2 [Homo sapiens]
          Length = 348

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 33/59 (55%), Positives = 43/59 (72%)

Query: 80  KRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKR 138
           K R+ RTAFT++Q+LELE+ F  +KYL+ +ER  +A  L L+  QV  WFQNRRAK KR
Sbjct: 246 KNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR 304


>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 814

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 59/188 (31%), Positives = 78/188 (41%), Gaps = 27/188 (14%)

Query: 8   EVSLGELGGEKCRGGRRSFPPLAASRP---ARPGGWRWARRDLCKTASRAENNSQACRPQ 64
           + S G    E    G R   P+A   P   A PGG            +  +  + A +P+
Sbjct: 600 DASPGATVDEAAAPGPRENSPVAPGPPGGAAAPGG----------AGTTPQGTATAAKPK 649

Query: 65  R-RAGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANA 123
           R R G D+    P     R++RTAFT +Q++ LE +F   +YL+  ER  LA  L L   
Sbjct: 650 RKRTGSDSKSGKP-----RRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTET 704

Query: 124 QVVTWFQNRRAKLKRD--VEEMRADVASLRALSPEVLCSLALPEG------APDPGLCLG 175
           QV  WFQNRR K K+     +  A         P       LP G      +P  G  LG
Sbjct: 705 QVKIWFQNRRTKWKKQNPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLG 764

Query: 176 PAGPDSRP 183
             GP   P
Sbjct: 765 MHGPAGYP 772


>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
          Length = 411

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 59/188 (31%), Positives = 78/188 (41%), Gaps = 27/188 (14%)

Query: 8   EVSLGELGGEKCRGGRRSFPPLAASRP---ARPGGWRWARRDLCKTASRAENNSQACRPQ 64
           + S G    E    G R   P+A   P   A PGG            +  +  + A +P+
Sbjct: 197 DASPGATVDEAAAPGPRENSPVAQGPPGGAAAPGG----------AGTTPQGTATAAKPK 246

Query: 65  R-RAGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANA 123
           R R G D+    P     R++RTAFT +Q++ LE +F   +YL+  ER  LA  L L   
Sbjct: 247 RKRTGSDSKSGKP-----RRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTET 301

Query: 124 QVVTWFQNRRAKLKRD--VEEMRADVASLRALSPEVLCSLALPEG------APDPGLCLG 175
           QV  WFQNRR K K+     +  A         P       LP G      +P  G  LG
Sbjct: 302 QVKIWFQNRRTKWKKQNPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLG 361

Query: 176 PAGPDSRP 183
             GP   P
Sbjct: 362 MHGPAGYP 369


>gi|94536800 empty spiracles homolog 1 [Homo sapiens]
          Length = 290

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 40/64 (62%)

Query: 75  GPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRA 134
           GPF RK ++ RTAF+  Q+L LER F    Y+  +ER  LA  L L+  QV  WFQNRR 
Sbjct: 186 GPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRT 245

Query: 135 KLKR 138
           K KR
Sbjct: 246 KYKR 249


>gi|118582284 msh homeobox 1 [Homo sapiens]
          Length = 303

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 2/107 (1%)

Query: 63  PQRRAGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLAN 122
           P RR  P A       +  RK RT FT  Q+L LER+F  ++YL+ +ER   ++ L L  
Sbjct: 155 PARRLSPPACTLRKH-KTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTE 213

Query: 123 AQVVTWFQNRRAKLKRDVE-EMRADVASLRALSPEVLCSLALPEGAP 168
            QV  WFQNRRAK KR  E E+     + + + P     L+ P G P
Sbjct: 214 TQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAAFGLSFPLGGP 260


>gi|89257348 homeo box HB9 [Homo sapiens]
          Length = 401

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 4/105 (3%)

Query: 80  KRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRD 139
           K R+ RTAFT+QQ+LELE +F   KYL+  +R  +AT L L   QV  WFQNRR K KR 
Sbjct: 240 KCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKR- 298

Query: 140 VEEMRADVASLRALSPEVLCSLALPEGAPDPGL--CLGPAGPDSR 182
             +   + A+  A   +     A   GA +PG    LGP  P  +
Sbjct: 299 -SKKAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEELLGPPAPGDK 342


>gi|6633798 BarH-like homeobox 2 [Homo sapiens]
          Length = 279

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 34/67 (50%), Positives = 44/67 (65%)

Query: 74  PGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRR 133
           P P  +K R+SRT FT  Q++ LE++F  QKYL+  +R  LA  LGL   QV TW+QNRR
Sbjct: 126 PTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRR 185

Query: 134 AKLKRDV 140
            K K+ V
Sbjct: 186 MKWKKMV 192


>gi|4502365 NK3 homeobox 2 [Homo sapiens]
          Length = 333

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 42/101 (41%), Positives = 53/101 (52%), Gaps = 7/101 (6%)

Query: 47  LCKTASRAENNSQACRPQRRAGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYL 106
           LC  A     +  A   +    P A  P     ++++SR AF+  QV ELERRF  Q+YL
Sbjct: 177 LCSGAGGGGGSGPAGVAEEEEEPAAPKP-----RKKRSRAAFSHAQVFELERRFNHQRYL 231

Query: 107 APSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEEMRADV 147
           +  ER  LA  L L   QV  WFQNRR K KR   +M AD+
Sbjct: 232 SGPERADLAASLKLTETQVKIWFQNRRYKTKR--RQMAADL 270


>gi|70608170 H6 family homeobox 2 [Homo sapiens]
          Length = 273

 Score = 65.1 bits (157), Expect = 4e-11
 Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)

Query: 78  GRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLK 137
           G  ++K+RT F+  QV +LE  F  ++YL+ SER  LA+ L L   QV TWFQNRR K K
Sbjct: 146 GAAKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWK 205

Query: 138 RDVEEMRADVASLRALSPEVLCSLAL 163
           R +     + A++   S + L S+ L
Sbjct: 206 RQL-SAELEAANMAHASAQTLVSMPL 230


>gi|157743259 H6 family homeobox 3 [Homo sapiens]
          Length = 357

 Score = 65.1 bits (157), Expect = 4e-11
 Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 4/111 (3%)

Query: 80  KRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRD 139
           +++K+RT F+  QV +LE  F  ++YL+ SER GLA  L L   QV  WFQNRR K KR 
Sbjct: 226 RKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQ 285

Query: 140 V-EEMRADVASLRALSPEVLCSLALPEGAPDPGLCLGPAG---PDSRPHLS 186
           +  E+ A   S  A    V   +   E +   G     AG   P S+P L+
Sbjct: 286 LAAELEAANLSHAAAQRIVRVPILYHENSAAEGAAAAAAGAPVPVSQPLLT 336


>gi|23397672 homeobox D4 [Homo sapiens]
          Length = 255

 Score = 64.7 bits (156), Expect = 5e-11
 Identities = 32/70 (45%), Positives = 45/70 (64%)

Query: 70  DALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWF 129
           +++ P   G + ++SRTA+T QQVLELE+ F F +YL    R  +A  L L+  Q+  WF
Sbjct: 143 NSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWF 202

Query: 130 QNRRAKLKRD 139
           QNRR K K+D
Sbjct: 203 QNRRMKWKKD 212


>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
          Length = 387

 Score = 64.7 bits (156), Expect = 5e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 3/78 (3%)

Query: 79  RKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKR 138
           +K RK+RTAF+  Q+ +LER F  QKYL+  +R  LA  L L + QV TW+QNRR K KR
Sbjct: 230 KKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKR 289

Query: 139 DVE---EMRADVASLRAL 153
                 E+ A+  +  AL
Sbjct: 290 QTAVGLELLAEAGNYSAL 307


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,958,557
Number of Sequences: 37866
Number of extensions: 444850
Number of successful extensions: 2231
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 1890
Number of HSP's gapped (non-prelim): 378
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.