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Search of human proteins with 56676393
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56676393 Rho GDP dissociation inhibitor (GDI) beta [Homo
sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56676393 Rho GDP dissociation inhibitor (GDI) beta [Homo sapi... 416 e-117
gi|4757768 Rho GDP dissociation inhibitor (GDI) alpha [Homo sapi... 286 8e-78
gi|83313661 Rho GDP dissociation inhibitor (GDI) gamma [Homo sap... 232 1e-61
gi|62244004 modulator of estrogen induced transcription isoform ... 32 0.28
gi|63176611 modulator of estrogen induced transcription isoform ... 32 0.28
gi|94557295 mitogen-activated protein kinase 8 interacting prote... 31 0.62
gi|94557297 mitogen-activated protein kinase 8 interacting prote... 31 0.62
gi|81295809 pericentrin [Homo sapiens] 30 1.4
gi|224493919 zinc finger and SCAN domain containing 18 isoform 2... 29 2.4
gi|224493912 zinc finger and SCAN domain containing 18 isoform 3... 29 2.4
gi|226371704 zinc finger and SCAN domain containing 18 isoform 3... 29 2.4
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 29 2.4
gi|89886480 zinedin isoform 2 [Homo sapiens] 29 2.4
gi|89886477 zinedin isoform 1 [Homo sapiens] 29 2.4
gi|224493905 zinc finger and SCAN domain containing 18 isoform 1... 29 2.4
gi|210032580 SET domain containing 1B [Homo sapiens] 29 2.4
gi|110349719 titin isoform N2-A [Homo sapiens] 29 3.1
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 29 3.1
gi|112789532 poliovirus receptor related 2 isoform delta precurs... 28 4.0
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 28 4.0
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 28 4.0
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 28 4.0
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 28 5.2
gi|239747195 PREDICTED: similar to PITSLRE protein kinase beta S... 28 5.2
gi|9910382 mitochondrial import receptor Tom22 [Homo sapiens] 28 5.2
gi|4885615 signal transducer and activator of transcription 2 [H... 28 6.9
gi|219842236 feline sarcoma oncogene isoform 4 [Homo sapiens] 28 6.9
gi|219842233 feline sarcoma oncogene isoform 3 [Homo sapiens] 28 6.9
gi|219842230 feline sarcoma oncogene isoform 2 [Homo sapiens] 28 6.9
gi|4503687 feline sarcoma oncogene isoform 1 [Homo sapiens] 28 6.9
>gi|56676393 Rho GDP dissociation inhibitor (GDI) beta [Homo
sapiens]
Length = 201
Score = 416 bits (1068), Expect = e-117
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MTEKAPEPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVT 60
MTEKAPEPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVT
Sbjct: 1 MTEKAPEPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVT 60
Query: 61 DPKAPNVVVTRLTLVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRDIV 120
DPKAPNVVVTRLTLVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRDIV
Sbjct: 61 DPKAPNVVVTRLTLVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRDIV 120
Query: 121 SGLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFFTD 180
SGLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFFTD
Sbjct: 121 SGLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFFTD 180
Query: 181 DDKQDHLSWEWNLSIKKEWTE 201
DDKQDHLSWEWNLSIKKEWTE
Sbjct: 181 DDKQDHLSWEWNLSIKKEWTE 201
>gi|4757768 Rho GDP dissociation inhibitor (GDI) alpha [Homo
sapiens]
Length = 204
Score = 286 bits (732), Expect = 8e-78
Identities = 133/188 (70%), Positives = 159/188 (84%)
Query: 14 DDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTDPKAPNVVVTRLT 73
+++E + +NYKPP QKS++E+QE+DKDDESL KYK+ LLG V DP PNVVVT LT
Sbjct: 17 ENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSADPNVPNVVVTGLT 76
Query: 74 LVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRDIVSGLKYVQHTYRTG 133
LVC SAPGP+ +DLTGDLE+ KK++ VLKEG EYR+KI F+VNR+IVSG+KY+QHTYR G
Sbjct: 77 LVCSSAPGPLELDLTGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKG 136
Query: 134 VKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFFTDDDKQDHLSWEWNL 193
VK+DK +MVGSYGPR EEYEFLTPVEEAPKGMLARG+Y KS FTDDDK DHLSWEWNL
Sbjct: 137 VKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEWNL 196
Query: 194 SIKKEWTE 201
+IKK+W +
Sbjct: 197 TIKKDWKD 204
>gi|83313661 Rho GDP dissociation inhibitor (GDI) gamma [Homo
sapiens]
Length = 225
Score = 232 bits (592), Expect = 1e-61
Identities = 112/188 (59%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Query: 15 DDELDSKL-NYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTDPKAPNVVVTRLT 73
D+ LD + Y+ P +KSL E++++D DD SL KYK+ LLG P DP PNV VTRLT
Sbjct: 38 DEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSLAKYKRVLLGPLPPAVDPSLPNVQVTRLT 97
Query: 74 LVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRDIVSGLKYVQHTYRTG 133
L+ E APGP+ MDLTGDL LK + VLKEG +YRVKI FKV+R+IVSGLK + HTYR G
Sbjct: 98 LLSEQAPGPVVMDLTGDLAVLKDQVFVLKEGVDYRVKISFKVHREIVSGLKCLHHTYRRG 157
Query: 134 VKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFFTDDDKQDHLSWEWNL 193
++VDK +MVGSYGP +EYEF+TPVEEAP+G L RG Y S FTDDD+ HLSWEW L
Sbjct: 158 LRVDKTVYMVGSYGPSAQEYEFVTPVEEAPRGALVRGPYLVVSLFTDDDRTHHLSWEWGL 217
Query: 194 SIKKEWTE 201
I ++W +
Sbjct: 218 CICQDWKD 225
>gi|62244004 modulator of estrogen induced transcription isoform b
[Homo sapiens]
Length = 1016
Score = 32.3 bits (72), Expect = 0.28
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 25/156 (16%)
Query: 2 TEKAPEPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTD 61
T + +P E + DS+ N PPP+ L+E + E + + ++ D P +T
Sbjct: 790 TARREDPSFERYPKNFSDSRRNEPPPPRNELRESDRREVRGER-DERRTVIIHDRPDITH 848
Query: 62 PKAPNVVVTRLTLVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRDIVS 121
P+ P E+ P P + T EGS K +V R S
Sbjct: 849 PRHPR----------EAGPNP------------SRPTSWKSEGSMSTDKRETRVERPERS 886
Query: 122 GLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLT 157
G + H+ R ++++ YG R + +T
Sbjct: 887 GREVSGHSVRGAPPGNRSS--ASGYGSREGDRGVIT 920
>gi|63176611 modulator of estrogen induced transcription isoform a
[Homo sapiens]
Length = 1034
Score = 32.3 bits (72), Expect = 0.28
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 25/156 (16%)
Query: 2 TEKAPEPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTD 61
T + +P E + DS+ N PPP+ L+E + E + + ++ D P +T
Sbjct: 808 TARREDPSFERYPKNFSDSRRNEPPPPRNELRESDRREVRGER-DERRTVIIHDRPDITH 866
Query: 62 PKAPNVVVTRLTLVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRDIVS 121
P+ P E+ P P + T EGS K +V R S
Sbjct: 867 PRHPR----------EAGPNP------------SRPTSWKSEGSMSTDKRETRVERPERS 904
Query: 122 GLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLT 157
G + H+ R ++++ YG R + +T
Sbjct: 905 GREVSGHSVRGAPPGNRSS--ASGYGSREGDRGVIT 938
>gi|94557295 mitogen-activated protein kinase 8 interacting protein
3 isoform 2 [Homo sapiens]
Length = 1330
Score = 31.2 bits (69), Expect = 0.62
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 13 DDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTDPKAPNVVVTRL 72
D + + + K + P +K KEL EMD + TL V+ D P VV +
Sbjct: 735 DREGDGEPKSAHTSPEKKKAKELPEMDATSSRVWILTSTLTTSKVVIIDANQPGTVVDQF 794
Query: 73 TLVCES 78
T VC +
Sbjct: 795 T-VCNA 799
>gi|94557297 mitogen-activated protein kinase 8 interacting protein
3 isoform 1 [Homo sapiens]
Length = 1336
Score = 31.2 bits (69), Expect = 0.62
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 13 DDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTDPKAPNVVVTRL 72
D + + + K + P +K KEL EMD + TL V+ D P VV +
Sbjct: 741 DREGDGEPKSAHTSPEKKKAKELPEMDATSSRVWILTSTLTTSKVVIIDANQPGTVVDQF 800
Query: 73 TLVCES 78
T VC +
Sbjct: 801 T-VCNA 805
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 30.0 bits (66), Expect = 1.4
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 9 HVEEDDDDELDSKLNYKPPPQKSLKE--LQEMDKDDESLIKYKKTLLGDGPVVTDPKAPN 66
+ + +EL + + QK L++ +E+++ E + K + L GPVV +
Sbjct: 1708 YTRSSEIEELKATIENLQENQKRLQKEKAEEIEQLHEVIEKLQHELSLMGPVVHEVSDSQ 1767
Query: 67 VVVTRLTLVCESAPGPITMDLTGDLEA 93
+ L+C A GP L G+LEA
Sbjct: 1768 AGSLQSELLCSQAGGPRGQALQGELEA 1794
>gi|224493919 zinc finger and SCAN domain containing 18 isoform 2
[Homo sapiens]
Length = 374
Score = 29.3 bits (64), Expect = 2.4
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 7 EPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTDPKAPN 66
E EED + KL P + L E +D +E+L Y+K LL G ++ P A +
Sbjct: 66 EAKTEEDGPANTEQKLKSFPEDPQHLGEWGHLDPAEENLKSYRKLLLW-GYQLSQPDAAS 124
Query: 67 VVVTRLTLVCESAP 80
+ T + E P
Sbjct: 125 RLDTEELRLVERDP 138
>gi|224493912 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 29.3 bits (64), Expect = 2.4
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 7 EPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTDPKAPN 66
E EED + KL P + L E +D +E+L Y+K LL G ++ P A +
Sbjct: 201 EAKTEEDGPANTEQKLKSFPEDPQHLGEWGHLDPAEENLKSYRKLLLW-GYQLSQPDAAS 259
Query: 67 VVVTRLTLVCESAP 80
+ T + E P
Sbjct: 260 RLDTEELRLVERDP 273
>gi|226371704 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 29.3 bits (64), Expect = 2.4
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 7 EPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTDPKAPN 66
E EED + KL P + L E +D +E+L Y+K LL G ++ P A +
Sbjct: 201 EAKTEEDGPANTEQKLKSFPEDPQHLGEWGHLDPAEENLKSYRKLLLW-GYQLSQPDAAS 259
Query: 67 VVVTRLTLVCESAP 80
+ T + E P
Sbjct: 260 RLDTEELRLVERDP 273
>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
Length = 2382
Score = 29.3 bits (64), Expect = 2.4
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 EDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGP--VVTDPKAP 65
E D ++ D KL + K LKE+Q++ + I+ T LG P V+ P AP
Sbjct: 2064 ESDIEDEDLKLELRRLRDKHLKEIQDLQSRQKHEIESLYTKLGKVPPAVIIPPAAP 2119
>gi|89886480 zinedin isoform 2 [Homo sapiens]
Length = 760
Score = 29.3 bits (64), Expect = 2.4
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 11 EEDDDDELDS----KLNYKPPPQKSLKELQEMDKDDES 44
+ D+DDELDS K K P + + E+++ D++D+S
Sbjct: 275 DSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDS 312
>gi|89886477 zinedin isoform 1 [Homo sapiens]
Length = 753
Score = 29.3 bits (64), Expect = 2.4
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 11 EEDDDDELDS----KLNYKPPPQKSLKELQEMDKDDES 44
+ D+DDELDS K K P + + E+++ D++D+S
Sbjct: 275 DSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDS 312
>gi|224493905 zinc finger and SCAN domain containing 18 isoform 1
[Homo sapiens]
Length = 566
Score = 29.3 bits (64), Expect = 2.4
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 7 EPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTDPKAPN 66
E EED + KL P + L E +D +E+L Y+K LL G ++ P A +
Sbjct: 257 EAKTEEDGPANTEQKLKSFPEDPQHLGEWGHLDPAEENLKSYRKLLLW-GYQLSQPDAAS 315
Query: 67 VVVTRLTLVCESAP 80
+ T + E P
Sbjct: 316 RLDTEELRLVERDP 329
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 29.3 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 5 APEPHVEEDDDDELDSKLNYKPPPQ 29
+P P + D+D+ELD L +PPP+
Sbjct: 573 SPTPLPDSDEDEELDLGLGPRPPPE 597
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 28.9 bits (63), Expect = 3.1
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 11 EEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTDPKAPNVVVT 70
E + +E D Y+ + +E +E + E I K + + PV T PKAP V
Sbjct: 9758 EYEPTEEYDQYEEYEEREYERYEEHEEYITEPEKPIPVKP--VPEEPVPTKPKAPPAKVL 9815
Query: 71 RLTLVCESAPGPITMDL 87
+ + E P PI L
Sbjct: 9816 KKAVPEEKVPVPIPKKL 9832
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 28.9 bits (63), Expect = 3.1
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 25 KPPPQKSL---KELQEMDKDDESLIKYKKTLLGDGPVVTDPKAPNVVVTRLTLVCESAPG 81
+PPP L ++ Q DKD E + + +K G G + PK T SAP
Sbjct: 3217 QPPPTPQLPLQQQQQRKDKDSEKVKEKEKAHKGKGEPLPVPKKEKGEAPTATAATISAPL 3276
Query: 82 PITMDLTGD---LEALK 95
P TM+ D L+AL+
Sbjct: 3277 P-TMEYAVDPAQLQALQ 3292
>gi|112789532 poliovirus receptor related 2 isoform delta precursor
[Homo sapiens]
Length = 538
Score = 28.5 bits (62), Expect = 4.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 13 DDDDELDSKLNYKPPPQKSLKELQEM 38
++D++L+ +YKPP K+ E QEM
Sbjct: 395 EEDEDLEGPPSYKPPTPKAKLEAQEM 420
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 28.5 bits (62), Expect = 4.0
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 3 EKAPEPHVEEDDDDELDSKLNYKP--PPQKSLKELQ-EMDKDDESLIKYKKT 51
E+ E E+DDDDEL+ + + P + S+KE + D+ E L++ KT
Sbjct: 73 EEEDEEEEEDDDDDELEDEGEEEASMPNENSVKEPEIRCDEKPEDLLEEPKT 124
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 28.5 bits (62), Expect = 4.0
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 3 EKAPEPHVEEDDDDELDSKLNYKP--PPQKSLKELQ-EMDKDDESLIKYKKT 51
E+ E E+DDDDEL+ + + P + S+KE + D+ E L++ KT
Sbjct: 274 EEEDEEEEEDDDDDELEDEGEEEASMPNENSVKEPEIRCDEKPEDLLEEPKT 325
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 28.5 bits (62), Expect = 4.0
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 3 EKAPEPHVEEDDDDELDSKLNYKP--PPQKSLKELQ-EMDKDDESLIKYKKT 51
E+ E E+DDDDEL+ + + P + S+KE + D+ E L++ KT
Sbjct: 274 EEEDEEEEEDDDDDELEDEGEEEASMPNENSVKEPEIRCDEKPEDLLEEPKT 325
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 28.1 bits (61), Expect = 5.2
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 8 PHVEED---DDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYK 49
P+ ED D E D L KPP Q S KE KD++ K+K
Sbjct: 66 PYRREDSMEDRGEEDDSLAIKPPQQMSRKEKVHHRKDEKRKEKWK 110
>gi|239747195 PREDICTED: similar to PITSLRE protein kinase beta SV2
[Homo sapiens]
Length = 153
Score = 28.1 bits (61), Expect = 5.2
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 8 PHVEED---DDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYK 49
P+ ED D E D L KPP Q S KE KD++ K+K
Sbjct: 66 PYRREDSMEDRGEEDDSLAIKPPQQMSWKEKVHHRKDEKRKEKWK 110
>gi|9910382 mitochondrial import receptor Tom22 [Homo sapiens]
Length = 142
Score = 28.1 bits (61), Expect = 5.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 6 PEPHVEEDDDDELDSKLN 23
PE +EEDDD+ELD L+
Sbjct: 28 PEEELEEDDDEELDETLS 45
>gi|4885615 signal transducer and activator of transcription 2 [Homo
sapiens]
Length = 851
Score = 27.7 bits (60), Expect = 6.9
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 16/98 (16%)
Query: 16 DELDSKLNYKPPPQKSLKELQ-------EMDKDDESLIKYKKTLLGDGPVVTDPKAPNVV 68
DEL L KP P+ EL+ E+ D E L+K L + V + V+
Sbjct: 704 DELQQPLELKPEPELESLELELGLVPEPELSLDLEPLLKAGLDLGPELESVLESTLEPVI 763
Query: 69 VTRLTLVCESAP----GPITM-----DLTGDLEALKKE 97
L +V ++ P GP++ DL DL L E
Sbjct: 764 EPTLCMVSQTVPEPDQGPVSQPVPEPDLPCDLRHLNTE 801
>gi|219842236 feline sarcoma oncogene isoform 4 [Homo sapiens]
Length = 694
Score = 27.7 bits (60), Expect = 6.9
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 49 KKTLLGDGPVVTDPKAPNVVVTRLTLVC-ESAPGPITMDLTGDLEALKKETIVLKEGSEY 107
K L + ++ PN+V RL VC + P I M+L + L T + EG+
Sbjct: 473 KAKFLQEARILKQYSHPNIV--RLIGVCTQKQPIYIVMELVQGGDFL---TFLRTEGARL 527
Query: 108 RVKIHFKVNRDIVSGLKYVQ 127
RVK ++ D +G++Y++
Sbjct: 528 RVKTLLQMVGDAAAGMEYLE 547
>gi|219842233 feline sarcoma oncogene isoform 3 [Homo sapiens]
Length = 752
Score = 27.7 bits (60), Expect = 6.9
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 49 KKTLLGDGPVVTDPKAPNVVVTRLTLVC-ESAPGPITMDLTGDLEALKKETIVLKEGSEY 107
K L + ++ PN+V RL VC + P I M+L + L T + EG+
Sbjct: 531 KAKFLQEARILKQYSHPNIV--RLIGVCTQKQPIYIVMELVQGGDFL---TFLRTEGARL 585
Query: 108 RVKIHFKVNRDIVSGLKYVQ 127
RVK ++ D +G++Y++
Sbjct: 586 RVKTLLQMVGDAAAGMEYLE 605
>gi|219842230 feline sarcoma oncogene isoform 2 [Homo sapiens]
Length = 764
Score = 27.7 bits (60), Expect = 6.9
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 49 KKTLLGDGPVVTDPKAPNVVVTRLTLVC-ESAPGPITMDLTGDLEALKKETIVLKEGSEY 107
K L + ++ PN+V RL VC + P I M+L + L T + EG+
Sbjct: 543 KAKFLQEARILKQYSHPNIV--RLIGVCTQKQPIYIVMELVQGGDFL---TFLRTEGARL 597
Query: 108 RVKIHFKVNRDIVSGLKYVQ 127
RVK ++ D +G++Y++
Sbjct: 598 RVKTLLQMVGDAAAGMEYLE 617
>gi|4503687 feline sarcoma oncogene isoform 1 [Homo sapiens]
Length = 822
Score = 27.7 bits (60), Expect = 6.9
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 49 KKTLLGDGPVVTDPKAPNVVVTRLTLVC-ESAPGPITMDLTGDLEALKKETIVLKEGSEY 107
K L + ++ PN+V RL VC + P I M+L + L T + EG+
Sbjct: 601 KAKFLQEARILKQYSHPNIV--RLIGVCTQKQPIYIVMELVQGGDFL---TFLRTEGARL 655
Query: 108 RVKIHFKVNRDIVSGLKYVQ 127
RVK ++ D +G++Y++
Sbjct: 656 RVKTLLQMVGDAAAGMEYLE 675
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.133 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,384,101
Number of Sequences: 37866
Number of extensions: 436959
Number of successful extensions: 1295
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1260
Number of HSP's gapped (non-prelim): 61
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.