Guide to the Human Genome
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Name: ARHGDIB Sequence: fasta or formatted (201aa) NCBI GI: 56676393
Description:

Rho GDP dissociation inhibitor (GDI) beta

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5          7           1
 C cysteine            0.5          1           1
 D aspartate           9.0         18           4
 E glutamate          10.4         21           2
 F phenylalanine       2.5          5           2
 G glycine             5.5         11           1
 H histidine           2.5          5           1
 I isoleucine          3.0          6           1
 K lysine             11.4         23           2
 L leucine             9.0         18           2
 M methionine          2.5          5           1
 N asparagine          2.5          5           1
 P proline             7.0         14           3
 Q glutamine           2.0          4           1
 R arginine            3.0          6           1
 S serine              5.0         10           1
 T threonine           7.5         15           1
 V valine              8.0         16           3
 W tryptophan          1.5          3           1
 Y tyrosine            4.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GDP dissociation inhibitor (GDI) beta 
ARHGDIA               0.668   Rho GDP dissociation inhibitor (GDI) alpha 
ARHGDIG               0.529   Rho GDP dissociation inhibitor (GDI) gamma 
SLTM                  0.018   modulator of estrogen induced transcription isoform ...
SLTM                  0.018   modulator of estrogen induced transcription isoform ...
MAPK8IP3              0.015   mitogen-activated protein kinase 8 interacting prote...
MAPK8IP3              0.015   mitogen-activated protein kinase 8 interacting prote...
PCNT                  0.013   pericentrin 
ZSCAN18               0.010   zinc finger and SCAN domain containing 18 isoform 2...
ZSCAN18               0.010   zinc finger and SCAN domain containing 18 isoform 3...
ZSCAN18               0.010   zinc finger and SCAN domain containing 18 isoform 3...
WNK1                  0.010   WNK lysine deficient protein kinase 1 
STRN4                 0.010   zinedin isoform 2 
STRN4                 0.010   zinedin isoform 1 
ZSCAN18               0.010   zinc finger and SCAN domain containing 18 isoform 1...
SETD1B                0.010   SET domain containing 1B 
TTN                   0.010   titin isoform N2-A 
ZFHX3                 0.010   AT-binding transcription factor 1 
PVRL2                 0.008   poliovirus receptor related 2 isoform delta precurs...
PRDM2                 0.008   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.008   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.008   retinoblastoma protein-binding zinc finger protein i...
CDC2L2                0.008   cell division cycle 2-like 2 isoform 4 
LOC100294398          0.008   PREDICTED: similar to PITSLRE protein kinase beta S...
TOMM22                0.008   mitochondrial import receptor Tom22 
STAT2                 0.008   signal transducer and activator of transcription 2 [H...
FES                   0.008   feline sarcoma oncogene isoform 4 
FES                   0.008   feline sarcoma oncogene isoform 3 
FES                   0.008   feline sarcoma oncogene isoform 2 
FES                   0.008   feline sarcoma oncogene isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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