Guide to the Human Genome
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Name: TOMM22 Sequence: fasta or formatted (142aa) NCBI GI: 9910382
Description:

mitochondrial import receptor Tom22

Referenced in:

Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         15           3
 C cysteine            0.0          0           0
 D aspartate           4.9          7           3
 E glutamate          12.0         17           3
 F phenylalanine       4.2          6           1
 G glycine             8.5         12           2
 H histidine           0.0          0           0
 I isoleucine          2.8          4           1
 K lysine              3.5          5           1
 L leucine            13.4         19           2
 M methionine          4.2          6           1
 N asparagine          0.7          1           1
 P proline             7.0         10           1
 Q glutamine           7.0         10           4
 R arginine            4.2          6           1
 S serine              5.6          8           1
 T threonine           4.9          7           2
 V valine              4.2          6           2
 W tryptophan          1.4          2           1
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial import receptor Tom22 
CASZ1                 0.043   castor homolog 1, zinc finger isoform a 
ARX                   0.043   aristaless related homeobox 
DEK                   0.035   DEK oncogene isoform 1 
DEK                   0.035   DEK oncogene isoform 2 
AEBP2                 0.031   AE binding protein 2 isoform b 
HOMEZ                 0.031   homeodomain leucine zipper protein 
AEBP2                 0.031   AE binding protein 2 isoform a 
SCAF1                 0.027   SR-related CTD-associated factor 1 
BCCIP                 0.027   BRCA2 and CDKN1A-interacting protein isoform C [Homo...
BCCIP                 0.027   BRCA2 and CDKN1A-interacting protein isoform BCCIPbe...
BCCIP                 0.027   BRCA2 and CDKN1A-interacting protein isoform BCCIPalp...
WDR78                 0.027   WD repeat domain 78 isoform 1 
WDR78                 0.027   WD repeat domain 78 isoform 2 
SLC9A10               0.023   sperm-specific sodium proton exchanger 
TAF7L                 0.023   TATA box binding protein-associated factor, RNA poly...
LOC100291923          0.023   PREDICTED: hypothetical protein XP_002344991 
LOC100291342          0.023   PREDICTED: hypothetical protein XP_002347636 
LOC100287346          0.023   PREDICTED: hypothetical protein XP_002343486 
ROBO4                 0.023   roundabout homolog 4, magic roundabout 
MAP1B                 0.023   microtubule-associated protein 1B 
EIF5B                 0.023   eukaryotic translation initiation factor 5B 
ANO8                  0.020   anoctamin 8 
FAM123B               0.020   family with sequence similarity 123B 
SALL2                 0.020   sal-like 2 
MYLK                  0.020   myosin light chain kinase isoform 3A 
MYLK                  0.020   myosin light chain kinase isoform 1 
MYLK                  0.020   myosin light chain kinase isoform 3B 
MYLK                  0.020   myosin light chain kinase isoform 2 
NOL3                  0.020   nucleolar protein 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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