Guide to the Human Genome
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Name: ARHGDIG Sequence: fasta or formatted (225aa) NCBI GI: 83313661
Description:

Rho GDP dissociation inhibitor (GDI) gamma

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         15           1
 C cysteine            2.2          5           1
 D aspartate           8.0         18           3
 E glutamate           6.7         15           2
 F phenylalanine       1.8          4           1
 G glycine             7.1         16           2
 H histidine           2.2          5           2
 I isoleucine          1.8          4           1
 K lysine              4.9         11           1
 L leucine            15.6         35           2
 M methionine          1.3          3           1
 N asparagine          0.4          1           1
 P proline             7.1         16           2
 Q glutamine           3.1          7           1
 R arginine            7.1         16           2
 S serine              4.4         10           1
 T threonine           3.6          8           1
 V valine             11.1         25           2
 W tryptophan          1.3          3           1
 Y tyrosine            3.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GDP dissociation inhibitor (GDI) gamma 
ARHGDIA               0.509   Rho GDP dissociation inhibitor (GDI) alpha 
ARHGDIB               0.479   Rho GDP dissociation inhibitor (GDI) beta 
FAM90A1               0.016   hypothetical protein LOC55138 
LOC100287045          0.014   PREDICTED: hypothetical protein XP_002342469 isofor...
LOC100287045          0.014   PREDICTED: hypothetical protein XP_002342468 isofor...
FAM90A5               0.012   PREDICTED: hypothetical protein 
FAM90A3               0.012   PREDICTED: hypothetical protein 
LOC728888             0.012   PREDICTED: similar to acyl-CoA synthetase medium-ch...
FAM90A12              0.012   PREDICTED: hypothetical protein 
CEACAM8               0.012   carcinoembryonic antigen-related cell adhesion molec...
SEPT10                0.012   septin 10 isoform 2 
SEPT10                0.012   septin 10 isoform 1 
TTN                   0.009   titin isoform N2-A 
LOC100132247          0.009   hypothetical protein LOC100132247 
FAM90A10              0.009   PREDICTED: hypothetical protein LOC441328 
FAM90A14              0.009   PREDICTED: hypothetical protein 
FAM90A13              0.009   PREDICTED: hypothetical protein 
FAM90A15              0.009   PREDICTED: hypothetical protein LOC389630 
NPIPL3                0.009   nuclear pore complex interacting protein-like 3 [Ho...
FAM90A20              0.009   PREDICTED: hypothetical protein 
CDK3                  0.009   cyclin-dependent kinase 3 
MYO15A                0.007   myosin XV 
LRRN4                 0.007   leucine rich repeat neuronal 4 
IPO8                  0.007   importin 8 
ASAP2                 0.007   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
ASXL3                 0.007   additional sex combs like 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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