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Search of human proteins with 56549113
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56549113 debranching enzyme homolog 1 [Homo sapiens]
(544 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56549113 debranching enzyme homolog 1 [Homo sapiens] 1122 0.0
gi|93352551 CWF19-like 1, cell cycle control [Homo sapiens] 67 3e-11
gi|210032580 SET domain containing 1B [Homo sapiens] 41 0.003
gi|16445033 ACRC protein [Homo sapiens] 40 0.004
gi|157694505 LINE-1 type transposase domain containing 1 [Homo s... 40 0.007
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 37 0.035
gi|153791492 eukaryotic translation initiation factor 3, subunit... 37 0.060
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 36 0.079
gi|83700233 eukaryotic translation initiation factor 3, subunit ... 36 0.079
gi|4503525 eukaryotic translation initiation factor 3, subunit C... 36 0.079
gi|171184451 centrosome-associated protein 350 [Homo sapiens] 35 0.13
gi|7662316 HIV-1 Vpr binding protein [Homo sapiens] 35 0.18
gi|55956788 nucleolin [Homo sapiens] 34 0.30
gi|115529449 upstream binding transcription factor, RNA polymera... 34 0.30
gi|115529451 upstream binding transcription factor, RNA polymera... 34 0.30
gi|7657671 upstream binding transcription factor, RNA polymerase... 34 0.30
gi|46255064 synaptotagmin-like 2 isoform d [Homo sapiens] 34 0.39
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 34 0.39
gi|215422388 death-domain associated protein isoform a [Homo sap... 34 0.39
gi|215422366 death-domain associated protein isoform b [Homo sap... 34 0.39
gi|148727255 microtubule associated serine/threonine kinase fami... 34 0.39
gi|118600967 shroom family member 4 [Homo sapiens] 33 0.51
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 33 0.67
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 33 0.67
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 33 0.67
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 33 0.67
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 32 1.1
gi|119874201 furry-like [Homo sapiens] 32 1.5
gi|75677335 digestive-organ expansion factor homolog [Homo sapiens] 32 1.5
gi|116805348 trinucleotide repeat containing 6A [Homo sapiens] 32 1.9
>gi|56549113 debranching enzyme homolog 1 [Homo sapiens]
Length = 544
Score = 1122 bits (2901), Expect = 0.0
Identities = 544/544 (100%), Positives = 544/544 (100%)
Query: 1 MRVAVAGCCHGELDKIYETLALAERRGPGPVDLLLCCGDFQAVRNEADLRCMAVPPKYRH 60
MRVAVAGCCHGELDKIYETLALAERRGPGPVDLLLCCGDFQAVRNEADLRCMAVPPKYRH
Sbjct: 1 MRVAVAGCCHGELDKIYETLALAERRGPGPVDLLLCCGDFQAVRNEADLRCMAVPPKYRH 60
Query: 61 MQTFYRYYSGEKKAPVLTLFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGVVKYRGVRI 120
MQTFYRYYSGEKKAPVLTLFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGVVKYRGVRI
Sbjct: 61 MQTFYRYYSGEKKAPVLTLFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGVVKYRGVRI 120
Query: 121 GGISGIFKSHDYRKGHFECPPYNSSTIRSIYHVRNIEVYKLKQLKQPIDIFLSHDWPRSI 180
GGISGIFKSHDYRKGHFECPPYNSSTIRSIYHVRNIEVYKLKQLKQPIDIFLSHDWPRSI
Sbjct: 121 GGISGIFKSHDYRKGHFECPPYNSSTIRSIYHVRNIEVYKLKQLKQPIDIFLSHDWPRSI 180
Query: 181 YHYGNKKQLLKTKSFFRQEVENNTLGSPAASELLEHLKPTYWFSAHLHVKFAALMQHQAK 240
YHYGNKKQLLKTKSFFRQEVENNTLGSPAASELLEHLKPTYWFSAHLHVKFAALMQHQAK
Sbjct: 181 YHYGNKKQLLKTKSFFRQEVENNTLGSPAASELLEHLKPTYWFSAHLHVKFAALMQHQAK 240
Query: 241 DKGQTARATKFLALDKCLPHRDFLQILEIEHDPSAPDYLEYDIEWLTILRATDDLINVTG 300
DKGQTARATKFLALDKCLPHRDFLQILEIEHDPSAPDYLEYDIEWLTILRATDDLINVTG
Sbjct: 241 DKGQTARATKFLALDKCLPHRDFLQILEIEHDPSAPDYLEYDIEWLTILRATDDLINVTG 300
Query: 301 RLWNMPENNGLHARWDYSATEEGMKEVLEKLNHDLKVPCNFSVTAACYDPSKPQTQMQLI 360
RLWNMPENNGLHARWDYSATEEGMKEVLEKLNHDLKVPCNFSVTAACYDPSKPQTQMQLI
Sbjct: 301 RLWNMPENNGLHARWDYSATEEGMKEVLEKLNHDLKVPCNFSVTAACYDPSKPQTQMQLI 360
Query: 361 HRINPQTTEFCAQLGIIDINVRLQKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSA 420
HRINPQTTEFCAQLGIIDINVRLQKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSA
Sbjct: 361 HRINPQTTEFCAQLGIIDINVRLQKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSA 420
Query: 421 LSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSD 480
LSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSD
Sbjct: 421 LSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSD 480
Query: 481 DTVDSTIDREGKPGGTVESGNGEDLTKVPLKRLSDEHEPEQRKKIKRRNQAIYAAVDDDD 540
DTVDSTIDREGKPGGTVESGNGEDLTKVPLKRLSDEHEPEQRKKIKRRNQAIYAAVDDDD
Sbjct: 481 DTVDSTIDREGKPGGTVESGNGEDLTKVPLKRLSDEHEPEQRKKIKRRNQAIYAAVDDDD 540
Query: 541 DDAA 544
DDAA
Sbjct: 541 DDAA 544
>gi|93352551 CWF19-like 1, cell cycle control [Homo sapiens]
Length = 538
Score = 67.4 bits (163), Expect = 3e-11
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 49/262 (18%)
Query: 1 MRVAVAGCCHGELDKIYETLALAERRGPGPVDLLLCCGDFQAVRNEADLRCMAVPPKYRH 60
+R+ G G+ D ++ + +++ G DLLLC G+F +A+
Sbjct: 6 LRLLACGDVEGKFDILFNRVQAIQKKS-GNFDLLLCVGNFFGSTQDAE------------ 52
Query: 61 MQTFYRYYSGEKKAPVLTLFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGV-VKYRGVR 119
+ Y +G KKAP+ T +G N++ + + G +A NI YLG G+ G++
Sbjct: 53 ---WEEYKTGIKKAPIQTYVLGANNQETVKYFQDADGCELAENITYLGRKGIFTGSSGLQ 109
Query: 120 IGGISGIFKSHDYRKGHFECPPYNSSTIRSIYHVRNIEVYKLKQLKQPIDIFLSHDWPRS 179
I +SG ++ G + P + S++R + + Q K +DI L+ WP+
Sbjct: 110 IVYLSGTESLNEPVPG-YSFSPKDVSSLRMM-------LCTTSQFK-GVDILLTSPWPKC 160
Query: 180 IYHYGNKKQLLKTKSFFRQEVENNTLGSPAASELLEHLKPTYWFSA-------HLHVKFA 232
+ ++GN EV+ GS S L LKP Y F+A L +
Sbjct: 161 VGNFGNSS----------GEVDTKKCGSALVSSLATGLKPRYHFAALEKTYYERLPYRNH 210
Query: 233 ALMQHQAKDKGQTARATKFLAL 254
++Q A+ AT+F+AL
Sbjct: 211 IILQENAQ------HATRFIAL 226
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 40.8 bits (94), Expect = 0.003
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 384 QKSKEEHHVCGEYEEQDDVESNDSGE-DQSEYNTDTSALSSINPDEIMLDEEEDEDSIVS 442
Q+S EE E EE++D + +DS + D+SE + + +ALS + + +EE+ SIV+
Sbjct: 1045 QESTEEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEASEKDEGDSDEEETVSIVT 1104
Query: 443 AHSGMNTPSVEPSDQASEFSAS 464
S S S ++SEF +S
Sbjct: 1105 --SKAEATSSSESSESSEFESS 1124
Score = 30.8 bits (68), Expect = 3.3
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 392 VCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPS 451
V + E ES++S E +S ++++S SS + +E++ EEE+E+ + + S
Sbjct: 1103 VTSKAEATSSSESSESSEFES--SSESSPSSSEDEEEVVAREEEEEEEEEEMVAEESMAS 1160
Query: 452 VEPSDQASEFSASFSDVRILPGSMIVSS---DDTVDSTIDREGKPGGTVESGNGEDLTKV 508
P D F + + PG+ V S ++ VD I+ E S E V
Sbjct: 1161 AGPED----FEQDGEEAALAPGAPAVDSLGMEEEVD--IETEAVAPEERPSMLDEPPLPV 1214
Query: 509 PLKRLSDEHEPEQ 521
++ +D EP +
Sbjct: 1215 GVEEPADSREPPE 1227
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 40.4 bits (93), Expect = 0.004
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 397 EEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSD 456
++ D S+D+ +D S+ N+D S + D+ + ++ +DS V S ++ + + S
Sbjct: 190 DDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSS 249
Query: 457 QASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVE---SGNGEDLTKVPLKRL 513
SE SD P S+ DS+ D E + + S + D ++ P +
Sbjct: 250 DDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKS 309
Query: 514 SDEHEPEQR 522
D PE +
Sbjct: 310 DDSDVPEDK 318
Score = 31.6 bits (70), Expect = 1.9
Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 27/153 (17%)
Query: 397 EEQDDVESNDSGEDQSEY---NTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVE 453
+ DD E+ D D SE N+D S N D+ + ++ +DS S +
Sbjct: 151 DNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDS-----------SDD 199
Query: 454 PSDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVES---GNGEDLTKVPL 510
SD +S+ ++ SDV P SD DS+ D + + +S + D ++ P
Sbjct: 200 NSDDSSDDNSDDSDV---PDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPD 256
Query: 511 KRLSDEHEPEQRKKIKRRNQAIYAAVDDDDDDA 543
D P+ A DD DD+
Sbjct: 257 DSSDDSEAPDDSSDDSE-------APDDSSDDS 282
Score = 30.4 bits (67), Expect = 4.3
Identities = 35/150 (23%), Positives = 53/150 (35%), Gaps = 31/150 (20%)
Query: 397 EEQDDVESNDSGEDQSEY---NTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVE 453
+ DD E+ D D SE N+D S N D+ ++ +DS V
Sbjct: 141 DNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDV------------ 188
Query: 454 PSDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGEDLTKVPLKRL 513
P D + + S SD S D++ DS + + V + +D + VP
Sbjct: 189 PDDNSDDSSDDNSDDS--------SDDNSDDSDVPDDKSDDSDVPDDSSDD-SDVPDDSS 239
Query: 514 SDEHEPEQRKKIKRRNQAIYAAVDDDDDDA 543
D P+ A DD DD+
Sbjct: 240 DDSEAPDDSSDDSE-------APDDSSDDS 262
>gi|157694505 LINE-1 type transposase domain containing 1 [Homo
sapiens]
Length = 865
Score = 39.7 bits (91), Expect = 0.007
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 381 VRLQKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSI 440
V++ K +E ++ + EE ++E D E + DTS L + L+EEE+E++
Sbjct: 363 VKVAKPEEMKNLETQEEEFSELEELDEEASGMEDDEDTSGLEEEEEEPSGLEEEEEEEAS 422
Query: 441 ---VSAHSGMNTPSVEPSDQASEFSA-----SFSDVRILPGSMIVSSDDTVDSTIDREGK 492
SG+ + S+Q S F + +V I M + D+V+ + E +
Sbjct: 423 GLEEDEASGLEEEEEQTSEQDSTFQGHTLVDAKHEVEITSDGMETTFIDSVEDSESEEEE 482
Query: 493 PGGTVESGNGEDLTKVPLKRLSDEHEPEQRKKI 525
G + E+G KV L+++ ++K+I
Sbjct: 483 EGKSSETG------KVKTTSLTEKKASRRQKEI 509
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 37.4 bits (85), Expect = 0.035
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 397 EEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSD 456
+ D +S+DS + ++ S+ SS + D D + DS S+ S ++ S + SD
Sbjct: 1185 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS--DSSDSSDSSDSSDSNESSDSSDSSD 1242
Query: 457 QASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED 504
+ ++S S S D+ DST D + +SGNG +
Sbjct: 1243 SSDSSNSSDSS----------DSSDSSDSTSDSNDESDSQSKSGNGNN 1280
Score = 33.9 bits (76), Expect = 0.39
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 400 DDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHS-GMNTPSVEPSDQA 458
DD + +DSG+ +S+ + S+ SS + D + + DS S+ S ++ S + SD
Sbjct: 535 DDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSD 594
Query: 459 SEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED 504
S S++ SD S S D+ DS+ + K + + D
Sbjct: 595 SSDSSNSSD-----SSDSSDSSDSSDSSDSSDSKSDSSKSESDSSD 635
Score = 33.5 bits (75), Expect = 0.51
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 397 EEQDDVESNDSGEDQSEYNTDT--SALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEP 454
+ D +S+DS D S+ +D+ S S + D D ++ DS S++S ++ S +
Sbjct: 612 DSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDS 671
Query: 455 SDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED 504
SD + S+S S S S D+ DS+ E + D
Sbjct: 672 SDSSDSSSSSDS-------SNSSDSSDSSDSSNSSESSDSSDSSDSDSSD 714
Score = 32.7 bits (73), Expect = 0.87
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 9/102 (8%)
Query: 403 ESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQASEFS 462
+S+DS S N+D+S S+ + D + DS S+ S ++ S + SD ++
Sbjct: 641 DSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSE 700
Query: 463 ASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED 504
+S S SSD + D +S N D
Sbjct: 701 SSDSS---------DSSDSDSSDSSDSSNSNSSDSDSSNSSD 733
Score = 31.6 bits (70), Expect = 1.9
Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 397 EEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSD 456
+ D S+DS + ++D+++ S + + + D DS S++S ++ S + SD
Sbjct: 553 DSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSD 612
Query: 457 QASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED 504
S+ SD S D+ DS + + +S + D
Sbjct: 613 -----SSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSD 655
Score = 30.4 bits (67), Expect = 4.3
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 400 DDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQAS 459
D +S+DS ++ S SS + D D DS S++S ++ S SD +S
Sbjct: 866 DSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSD-SS 924
Query: 460 EFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED 504
E S S + S S D+ DS+ + +S N D
Sbjct: 925 ESSNSSDNSNSSDSSNSSDSSDSSDSS--NSSDSSNSSDSSNSSD 967
Score = 30.0 bits (66), Expect = 5.7
Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 8/116 (6%)
Query: 397 EEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSD 456
+ + +SNDS ++ S+ SS + D + D DS S+ S ++ S + S+
Sbjct: 778 DSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSN 837
Query: 457 --------QASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED 504
+S+ S S S R + SSD + S + ES N D
Sbjct: 838 SSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSD 893
Score = 29.6 bits (65), Expect = 7.4
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 400 DDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEE-------DEDSIVSAHSGMNTPSV 452
D S+DS + N+ S+ SS + D D + D DS S+ S ++ S
Sbjct: 682 DSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSS 741
Query: 453 EPSDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED 504
+ SD + ++S S + SSD + S + +S N D
Sbjct: 742 DSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSD 793
Score = 29.6 bits (65), Expect = 7.4
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Query: 397 EEQDDVESNDSGEDQSEYNTDTSALSSIN-PDEIMLDEEEDEDSIVSAHSGMNTPSVEPS 455
+ + ES+DS + ++D+S S+ N D + + DS S+ S ++ S S
Sbjct: 694 DSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSS 753
Query: 456 DQASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED 504
D + +S S SSD + S + + +S N D
Sbjct: 754 DSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSD 802
Score = 29.6 bits (65), Expect = 7.4
Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Query: 397 EEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSD 456
E + +S+DS ++D+S S + D E +S +++S ++ S + SD
Sbjct: 887 ESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSD 946
Query: 457 QASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED 504
+ ++S S +S D+ +S+ + + +S N D
Sbjct: 947 SSDSSNSSDSS----------NSSDSSNSSDSSDSNSSDSSDSSNSSD 984
Score = 29.6 bits (65), Expect = 7.4
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Query: 400 DDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQAS 459
D S+DS + S ++D+S S + D + DS S+ S ++ S + SD +
Sbjct: 961 DSSNSSDSSDSNSSDSSDSSNSSDSS------DSSDSSDSSDSSDSSNSSDSSDSSDSSD 1014
Query: 460 EFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED 504
++S S + SSD + S + +S N D
Sbjct: 1015 SSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSD 1059
Score = 29.3 bits (64), Expect = 9.6
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 10/108 (9%)
Query: 397 EEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSD 456
+ + +S+DS + ++D+S S + D + +S S+ S + S SD
Sbjct: 834 DSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSD 893
Query: 457 QASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED 504
+ ++S SD SSD + S + ES N D
Sbjct: 894 SSDSSNSSDSD----------SSDSSNSSDSSDSSNSSDSSESSNSSD 931
>gi|153791492 eukaryotic translation initiation factor 3, subunit
C-like [Homo sapiens]
Length = 914
Score = 36.6 bits (83), Expect = 0.060
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 29/159 (18%)
Query: 401 DVESNDSGEDQS-EYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQAS 459
D ES+ + Q+ E + D A + E DE+EDED VSA + + S PS ++
Sbjct: 151 DFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDG-VSAATFLKKKSEAPSGESR 209
Query: 460 EFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED------------LTK 507
+F D +D+ DS D + G T + E+ L K
Sbjct: 210 KFLKKMDD----------EDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKK 259
Query: 508 VPL-----KRLSDEHEPEQRKKIKRRNQAIYAAVDDDDD 541
P K + E + +KK R+++ + ++D++
Sbjct: 260 APTTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEEEDNE 298
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 36.2 bits (82), Expect = 0.079
Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 15/139 (10%)
Query: 386 SKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHS 445
+K+ HV + Q +++ S+ T SS+ D++ L + ED DS
Sbjct: 389 TKDSQHVSSVTQNQKQYDTSSKTHSNSQQGT-----SSMLEDDLQLSDSEDSDS------ 437
Query: 446 GMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGEDL 505
TP PS A + P + SS +ST D + ES + +
Sbjct: 438 -EQTPEKPPSSSAPPSAPQSLPE---PVASAHSSSAESESTSDSDSSSDSESESSSSDSE 493
Query: 506 TKVPLKRLSDEHEPEQRKK 524
PL+ + E EP K
Sbjct: 494 ENEPLETPAPEPEPPTTNK 512
>gi|83700233 eukaryotic translation initiation factor 3, subunit C
[Homo sapiens]
Length = 913
Score = 36.2 bits (82), Expect = 0.079
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 31/159 (19%)
Query: 401 DVESNDSGEDQS-EYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQAS 459
D ES+ + Q+ E + D A + E DE+EDED VSA + + S PS ++
Sbjct: 151 DFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDG-VSAATFLKKKSEAPSGESR 209
Query: 460 EFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED------------LTK 507
+F D +D+ DS D + G T + E+ L K
Sbjct: 210 KFLKKMDD----------EDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKK 259
Query: 508 VPLKRLSDEH----EPEQRKKIKRRNQAIYAAVDDDDDD 542
P +DE E ++ K K+++ +D++++D
Sbjct: 260 AP---TTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEED 295
>gi|4503525 eukaryotic translation initiation factor 3, subunit C
[Homo sapiens]
Length = 913
Score = 36.2 bits (82), Expect = 0.079
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 31/159 (19%)
Query: 401 DVESNDSGEDQS-EYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQAS 459
D ES+ + Q+ E + D A + E DE+EDED VSA + + S PS ++
Sbjct: 151 DFESHITSYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDG-VSAATFLKKKSEAPSGESR 209
Query: 460 EFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGED------------LTK 507
+F D +D+ DS D + G T + E+ L K
Sbjct: 210 KFLKKMDD----------EDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKK 259
Query: 508 VPLKRLSDEH----EPEQRKKIKRRNQAIYAAVDDDDDD 542
P +DE E ++ K K+++ +D++++D
Sbjct: 260 AP---TTDEDKKAAEKKREDKAKKKHDRKSKRLDEEEED 295
>gi|171184451 centrosome-associated protein 350 [Homo sapiens]
Length = 3117
Score = 35.4 bits (80), Expect = 0.13
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 377 IDINVRLQKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDE-------- 428
+DIN +E + C E+ D D +D SEY + S L S+N E
Sbjct: 2574 VDINEDEDCYSDERYQCYNQEQNDTEGPKDREKDVSEYFYEKS-LPSVNDIEASVNRSRS 2632
Query: 429 --IMLDEEEDEDSIVSAHSGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDST 486
I D +D ++ AH + SV+ + E SD I + DDT+D+T
Sbjct: 2633 LKIETDNVQDISGVLEAHVHQQS-SVDSQISSKENKDLISDA--TEKVSIAAEDDTLDNT 2689
Query: 487 IDRE 490
E
Sbjct: 2690 FSEE 2693
>gi|7662316 HIV-1 Vpr binding protein [Homo sapiens]
Length = 1507
Score = 35.0 bits (79), Expect = 0.18
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 377 IDINVRLQKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDE-EE 435
+D RL + + E EE+D E ED E + DT L ++ D+++ E EE
Sbjct: 1380 MDTVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEE 1439
Query: 436 DEDSIVSAHSGMNTPSVEPSDQ 457
D+++ + G N PSD+
Sbjct: 1440 DDNNENAGEDGDN--DFSPSDE 1459
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 34.3 bits (77), Expect = 0.30
Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 8/152 (5%)
Query: 380 NVRLQKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNT-DTSALSSINPDEIMLDEEEDED 438
N + + S EE E +E+DD E D ED+ E +A + + DE D+E+DED
Sbjct: 139 NAKKEDSDEEEDDDSEEDEEDD-EDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDED 197
Query: 439 SIVSAHSGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVE 498
++E + + +A V+ + +D + D + E
Sbjct: 198 DDDDEEDDSEEEAMETTPAKGKKAAKVVPVK---AKNVAEDEDEEEDDEDEDDDDDEDDE 254
Query: 499 SGNGEDLTKVPLKRLSDEHEPEQRKKIKRRNQ 530
+ ED + + +E EP + KR+ +
Sbjct: 255 DDDDEDDEE---EEEEEEEEPVKEAPGKRKKE 283
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 34.3 bits (77), Expect = 0.30
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 395 EYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEP 454
E EE++D E+ DS ED + + +S S + DE D+E+++D N
Sbjct: 653 EDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSS 712
Query: 455 SDQASEFSASFSD 467
S +S +S SD
Sbjct: 713 SSSSSSGDSSDSD 725
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 385 KSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAH 444
+S+E+ + E++D+ E +D D SE D+S SS + E + EED++
Sbjct: 639 ESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED----- 693
Query: 445 SGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDS 485
+ E D SE S+S S SS D+ DS
Sbjct: 694 EDDDEDDDEDEDNESEGSSSSSS----------SSGDSSDS 724
Score = 30.4 bits (67), Expect = 4.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 384 QKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSA 443
+ +EE G+ E S S ED+SE + D+ D++EDED+
Sbjct: 653 EDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDD--EDDDEDEDNESEG 710
Query: 444 HSGMNTPSVEPSDQAS 459
S ++ S + SD S
Sbjct: 711 SSSSSSSSGDSSDSDS 726
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 34.3 bits (77), Expect = 0.30
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 395 EYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEP 454
E EE++D E+ DS ED + + +S S + DE D+E+++D N
Sbjct: 653 EDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSS 712
Query: 455 SDQASEFSASFSD 467
S +S +S SD
Sbjct: 713 SSSSSSGDSSDSD 725
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 385 KSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAH 444
+S+E+ + E++D+ E +D D SE D+S SS + E + EED++
Sbjct: 639 ESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED----- 693
Query: 445 SGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDS 485
+ E D SE S+S S SS D+ DS
Sbjct: 694 EDDDEDDDEDEDNESEGSSSSSS----------SSGDSSDS 724
Score = 30.4 bits (67), Expect = 4.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 384 QKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSA 443
+ +EE G+ E S S ED+SE + D+ D++EDED+
Sbjct: 653 EDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDD--EDDDEDEDNESEG 710
Query: 444 HSGMNTPSVEPSDQAS 459
S ++ S + SD S
Sbjct: 711 SSSSSSSSGDSSDSDS 726
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 34.3 bits (77), Expect = 0.30
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 395 EYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEP 454
E EE++D E+ DS ED + + +S S + DE D+E+++D N
Sbjct: 690 EDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSS 749
Query: 455 SDQASEFSASFSD 467
S +S +S SD
Sbjct: 750 SSSSSSGDSSDSD 762
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 385 KSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAH 444
+S+E+ + E++D+ E +D D SE D+S SS + E + EED++
Sbjct: 676 ESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED----- 730
Query: 445 SGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDS 485
+ E D SE S+S S SS D+ DS
Sbjct: 731 EDDDEDDDEDEDNESEGSSSSSS----------SSGDSSDS 761
Score = 30.4 bits (67), Expect = 4.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 384 QKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSA 443
+ +EE G+ E S S ED+SE + D+ D++EDED+
Sbjct: 690 EDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDD--EDDDEDEDNESEG 747
Query: 444 HSGMNTPSVEPSDQAS 459
S ++ S + SD S
Sbjct: 748 SSSSSSSSGDSSDSDS 763
>gi|46255064 synaptotagmin-like 2 isoform d [Homo sapiens]
Length = 1256
Score = 33.9 bits (76), Expect = 0.39
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%)
Query: 386 SKEEHHVCGEYEEQDDVESND--SGEDQSEYNTDTSALSSINPDEIMLDEEEDEDSIVSA 443
SK E + Y +Q+ E + S D S+ NT ++A S NP E+E S V
Sbjct: 765 SKVELTLASPYMKQEKEEEKEGFSESDFSDGNTSSNAESWRNPSS-----SEEEPSPV-- 817
Query: 444 HSGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTVESGNGE 503
++E S S S D+ SSD + + +D + P V S E
Sbjct: 818 -----LKTLERSAARKMPSKSLEDI---------SSDSSNQAKVDNQ--PEELVRSA--E 859
Query: 504 DLTKVPLKRLSDEHEPEQRKKIKRRNQAIYAAVDDDDDD 542
D++ VP + + P+ K+KR ++++ A + D+ DD
Sbjct: 860 DVSTVPTQPDNPFSHPD---KLKRMSKSVPAFLQDESDD 895
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 33.9 bits (76), Expect = 0.39
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 382 RLQKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEED----- 436
R + E+ E EE+++ E + D SE D + D+ DEEE+
Sbjct: 432 RAETDDEDDEESDEEEEEEEEEEEEEATD-SEEEEDLEQMQEGQEDDEEEDEEEEAAAGK 490
Query: 437 --EDSIVSAHSGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDRE 490
+ S +S+ N ++EP Q S S + + ++S + S+ID E
Sbjct: 491 DGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAPSSIDAE 546
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 33.9 bits (76), Expect = 0.39
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 382 RLQKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEED----- 436
R + E+ E EE+++ E + D SE D + D+ DEEE+
Sbjct: 432 RAETDDEDDEESDEEEEEEEEEEEEEATD-SEEEEDLEQMQEGQEDDEEEDEEEEAAAGK 490
Query: 437 --EDSIVSAHSGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDRE 490
+ S +S+ N ++EP Q S S + + ++S + S+ID E
Sbjct: 491 DGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAPSSIDAE 546
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 33.9 bits (76), Expect = 0.39
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 382 RLQKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSINPDEIMLDEEED----- 436
R + E+ E EE+++ E + D SE D + D+ DEEE+
Sbjct: 444 RAETDDEDDEESDEEEEEEEEEEEEEATD-SEEEEDLEQMQEGQEDDEEEDEEEEAAAGK 502
Query: 437 --EDSIVSAHSGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDRE 490
+ S +S+ N ++EP Q S S + + ++S + S+ID E
Sbjct: 503 DGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAPSSIDAE 558
>gi|148727255 microtubule associated serine/threonine kinase family
member 4 isoform a [Homo sapiens]
Length = 2434
Score = 33.9 bits (76), Expect = 0.39
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Query: 366 QTTEFCAQLGIIDINVRLQKSKEEHHVCGEYEEQDDVESNDSGEDQSEYNTDTSALSSI- 424
Q EF QL D E++H E EE+DD D + ++++ + S +
Sbjct: 665 QKAEFIPQLESEDDTSYFDTRSEKYHHM-ETEEEDDTNDEDFNVEIRQFSSCSHRFSKVF 723
Query: 425 -NPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQASEFS 462
+ D I + E+++ V PS E +SE+S
Sbjct: 724 SSIDRITQNSAEEKEDSVDKTKSTTLPSTETLSWSSEYS 762
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 33.5 bits (75), Expect = 0.51
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 384 QKSKEEHHVCGEYEEQDDVESNDSGEDQSE------YNTDTSALSSINPDEIM 430
QK +EE E EE+++ E + E++ E ++++TS ++NP+E++
Sbjct: 1128 QKQQEEEEEEEEEEEEEEEEEEEEAEEEEEELPPQYFSSETSGSCALNPEEVL 1180
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 33.1 bits (74), Expect = 0.67
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Query: 432 DEEEDEDSIVSAHSGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDREG 491
+E+ED + S +N+ S E D++ EF S + +++
Sbjct: 165 EEDEDNSKKIKERSRINS-SGESGDESDEFLQSRKGQKK-----------------NQKN 206
Query: 492 KPGGTVESGNGEDLTKVPLKRLSDEHEPEQRKKIKRRNQ 530
KPG +ESGN +D +K ++ + ++ ++ K+R++
Sbjct: 207 KPGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDE 245
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 33.1 bits (74), Expect = 0.67
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 13/172 (7%)
Query: 353 PQTQMQLIHRIN-PQTTEFC-AQLGIIDINVRLQKSKEEHHVCGEYEEQDDVESNDSGED 410
P+ Q++ ++N +T E C AQLGI +I+ E+ + E+ + +D E +DS +
Sbjct: 543 PKRQIRSRFQLNLDKTIESCKAQLGINEIS-------EDVYTAVEHSDSEDSEKSDSSD- 594
Query: 411 QSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQASEFSASFSDVRI 470
SEY +D S P++ E D SA P+ + S S + +
Sbjct: 595 -SEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKA 653
Query: 471 LPGSMIVSSDDTVDSTIDREGKPG--GTVESGNGEDLTKVPLKRLSDEHEPE 520
PG++ + + + KP + G+D T P L + + E
Sbjct: 654 DPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSE 705
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 33.1 bits (74), Expect = 0.67
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 13/172 (7%)
Query: 353 PQTQMQLIHRIN-PQTTEFC-AQLGIIDINVRLQKSKEEHHVCGEYEEQDDVESNDSGED 410
P+ Q++ ++N +T E C AQLGI +I+ E+ + E+ + +D E +DS +
Sbjct: 568 PKRQIRSRFQLNLDKTIESCKAQLGINEIS-------EDVYTAVEHSDSEDSEKSDSSD- 619
Query: 411 QSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQASEFSASFSDVRI 470
SEY +D S P++ E D SA P+ + S S + +
Sbjct: 620 -SEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKA 678
Query: 471 LPGSMIVSSDDTVDSTIDREGKPG--GTVESGNGEDLTKVPLKRLSDEHEPE 520
PG++ + + + KP + G+D T P L + + E
Sbjct: 679 DPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSE 730
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 33.1 bits (74), Expect = 0.67
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 13/172 (7%)
Query: 353 PQTQMQLIHRIN-PQTTEFC-AQLGIIDINVRLQKSKEEHHVCGEYEEQDDVESNDSGED 410
P+ Q++ ++N +T E C AQLGI +I+ E+ + E+ + +D E +DS +
Sbjct: 568 PKRQIRSRFQLNLDKTIESCKAQLGINEIS-------EDVYTAVEHSDSEDSEKSDSSD- 619
Query: 411 QSEYNTDTSALSSINPDEIMLDEEEDEDSIVSAHSGMNTPSVEPSDQASEFSASFSDVRI 470
SEY +D S P++ E D SA P+ + S S + +
Sbjct: 620 -SEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKA 678
Query: 471 LPGSMIVSSDDTVDSTIDREGKPG--GTVESGNGEDLTKVPLKRLSDEHEPE 520
PG++ + + + KP + G+D T P L + + E
Sbjct: 679 DPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSE 730
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 32.3 bits (72), Expect = 1.1
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 11/140 (7%)
Query: 378 DINVR-LQKSKEEHHVCGEYEEQDDVESNDSGE------DQSEYNTDTSALSSINPDEIM 430
DIN++ K + C E + Q + E + E + S NT S P
Sbjct: 2369 DINLKDFLPEKHDAFPCSEEQGQQEEEELTAEESLPSYLESSRVNTPVSQEEDSRPSSAQ 2428
Query: 431 L--DEEEDEDSIVSAHSGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDSTID 488
L D+ ++S HS + E S+ E S F++ +L + VS DT +S D
Sbjct: 2429 LISDDSYKTLKLLSQHS-IEYHDDELSELRGE-SYRFAEKMLLSEKLDVSHSDTEESVTD 2486
Query: 489 REGKPGGTVESGNGEDLTKV 508
G P ++ + K+
Sbjct: 2487 HAGPPSSELQGSDKRSREKI 2506
>gi|119874201 furry-like [Homo sapiens]
Length = 3013
Score = 32.0 bits (71), Expect = 1.5
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 401 DVESNDS-GEDQSEYNTDTS--ALSSINP-DEIMLDEEEDEDSIVSAHSGMNTPSVEPSD 456
DVE D+ GE +N +L SI+ D L E + S S +N + E +D
Sbjct: 2432 DVELEDAEGESMDNFNWGVRRRSLDSIDKGDTPSLQEYQCSSSTPS----LNLTNQEDTD 2487
Query: 457 QASEFSASFSDVRILPGSMIVSSDDTVDSTI 487
++SE A+ + +IL + +++SD D TI
Sbjct: 2488 ESSEEEAALTASQILSRTQMLNSDSATDETI 2518
>gi|75677335 digestive-organ expansion factor homolog [Homo sapiens]
Length = 756
Score = 32.0 bits (71), Expect = 1.5
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 14/126 (11%)
Query: 382 RLQKSKEEHHVC--GEYEEQDDVESNDSGEDQ--SEYNTDTSALSSINPDEIMLDEEEDE 437
R+ + + + +C E + D ES+ E Q S Y+ + L +++ +E +EEE+E
Sbjct: 36 RVSRKEAKPQICQLSESSDSSDSESDSESEPQQVSGYHRLLATLKNVSEEEEEDEEEEEE 95
Query: 438 DSIVSAHSGMNTPSVEPSDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDREGKPGGTV 497
+ + + MN E A+ S S + V + D EGK G
Sbjct: 96 EDSIVDDAEMNDEDGGSDVSVEEEMAAES----------TESPENVALSADPEGKEDGEE 145
Query: 498 ESGNGE 503
G +
Sbjct: 146 PPGTSQ 151
>gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]
Length = 1962
Score = 31.6 bits (70), Expect = 1.9
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 444 HSGMNTPSVE----PSDQASEFSASFSDVRILPGSMIVSSDDTVDSTIDRE------GKP 493
++G N PSVE PS+Q S SA+ + G +D +T K
Sbjct: 607 NTGTNLPSVEWNKLPSNQHSNDSANGNGKTFTNGWKSTEEEDQGSATSQTNEQSSVWAKT 666
Query: 494 GGTVESGNGEDLTKVPLKRLSDEHEPEQRKKIKRRN--QAIYAAVDDD 539
GGTVES + T ++ + E + R+KI + Q+I D D
Sbjct: 667 GGTVESDGSTESTGRLEEKGTGESQSRDRRKIDQHTLLQSIVNRTDLD 714
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,501,114
Number of Sequences: 37866
Number of extensions: 1058997
Number of successful extensions: 4212
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 3861
Number of HSP's gapped (non-prelim): 322
length of query: 544
length of database: 18,247,518
effective HSP length: 107
effective length of query: 437
effective length of database: 14,195,856
effective search space: 6203589072
effective search space used: 6203589072
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.