Guide to the Human Genome
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Name: DBR1 Sequence: fasta or formatted (544aa) NCBI GI: 56549113
Description:

debranching enzyme homolog 1

Referenced in:

RNases and RNA Stability

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         36           2
 C cysteine            2.0         11           2
 D aspartate           7.7         42           6
 E glutamate           8.1         44           3
 F phenylalanine       2.9         16           2
 G glycine             6.1         33           2
 H histidine           4.0         22           2
 I isoleucine          5.5         30           2
 K lysine              5.9         32           2
 L leucine             8.6         47           3
 M methionine          1.8         10           1
 N asparagine          4.2         23           2
 P proline             5.1         28           2
 Q glutamine           4.0         22           1
 R arginine            5.0         27           2
 S serine              7.2         39           2
 T threonine           4.4         24           2
 V valine              5.3         29           2
 W tryptophan          1.1          6           1
 Y tyrosine            4.2         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   debranching enzyme homolog 1 
CWF19L1               0.038   CWF19-like 1, cell cycle control 
SETD1B                0.015   SET domain containing 1B 
ACRC                  0.014   ACRC protein 
L1TD1                 0.014   LINE-1 type transposase domain containing 1 
DSPP                  0.011   dentin sialophosphoprotein preproprotein 
EIF3CL                0.011   eukaryotic translation initiation factor 3, subunit...
AFF1                  0.010   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
EIF3C                 0.010   eukaryotic translation initiation factor 3, subunit ...
EIF3C                 0.010   eukaryotic translation initiation factor 3, subunit C...
CEP350                0.009   centrosome-associated protein 350 
VPRBP                 0.009   HIV-1 Vpr binding protein 
NCL                   0.008   nucleolin 
UBTF                  0.008   upstream binding transcription factor, RNA polymera...
UBTF                  0.008   upstream binding transcription factor, RNA polymera...
UBTF                  0.008   upstream binding transcription factor, RNA polymerase...
SYTL2                 0.008   synaptotagmin-like 2 isoform d 
DAXX                  0.008   death-domain associated protein isoform a 
DAXX                  0.008   death-domain associated protein isoform a 
DAXX                  0.008   death-domain associated protein isoform b 
MAST4                 0.008   microtubule associated serine/threonine kinase fami...
SHROOM4               0.007   shroom family member 4 
EIF5B                 0.007   eukaryotic translation initiation factor 5B 
ZMYND8                0.007   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.007   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.007   zinc finger, MYND-type containing 8 isoform b 
ANK3                  0.006   ankyrin 3 isoform 1 
FRYL                  0.006   furry-like 
C1orf107              0.006   digestive-organ expansion factor homolog 
TNRC6A                0.006   trinucleotide repeat containing 6A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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