AFAP1L1 32800

Name: AFAP1L1	Sequence: fasta or formatted (768aa)		NCBI GI: 55742689
Description: actin filament associated protein 1-like 1 isoform 1		Referenced in: Cytoskeleton
Other entries for this name: alt prot [725aa] actin filament associated protein 1-like 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 53 2 C cysteine 2.5 19 2 D aspartate 5.3 41 2 E glutamate 10.2 78 5 F phenylalanine 1.6 12 1 G glycine 5.3 41 2 H histidine 2.3 18 1 I isoleucine 2.6 20 2 K lysine 7.6 58 3 L leucine 10.7 82 3 M methionine 1.4 11 1 N asparagine 2.6 20 1 P proline 6.1 47 3 Q glutamine 4.3 33 2 R arginine 7.2 55 2 S serine 9.6 74 3 T threonine 3.5 27 2 V valine 6.1 47 1 W tryptophan 1.0 8 1 Y tyrosine 3.1 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 actin filament associated protein 1-like 1 isoform 1... AFAP1L1 0.936 actin filament associated protein 1-like 1 isoform ... AFAP1 0.365 actin filament associated protein 1 AFAP1 0.280 actin filament associated protein 1 isoform a [Homo... AFAP1L2 0.189 KIAA1914 protein isoform 1 AFAP1L2 0.189 KIAA1914 protein isoform 2 CCDC88B 0.013 coiled-coil domain containing 88 DSP 0.013 desmoplakin isoform II DSP 0.013 desmoplakin isoform I LOC728047 0.013 PREDICTED: similar to Golgin subfamily A member 8-l... CALD1 0.013 caldesmon 1 isoform 1 MAP4K4 0.013 mitogen-activated protein kinase kinase kinase kinas... LOC643699 0.012 PREDICTED: similar to golgi autoantigen, golgin sub... GCC2 0.011 GRIP and coiled-coil domain-containing 2 NEFH 0.011 neurofilament, heavy polypeptide 200kDa FAM184B 0.011 hypothetical protein LOC27146 CEP250 0.011 centrosomal protein 2 ITSN2 0.011 intersectin 2 isoform 3 ITSN2 0.011 intersectin 2 isoform 1 ITSN2 0.011 intersectin 2 isoform 2 LOC653073 0.011 PREDICTED: Golgin subfamily A member 8-like protein... CCDC64B 0.011 coiled-coil domain containing 64B LOC728080 0.010 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728498 0.010 PREDICTED: similar to Golgin subfamily A member 8-l... LOC727909 0.010 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653720 0.010 PREDICTED: similar to Golgin subfamily A member 8-l... BAZ2B 0.010 bromodomain adjacent to zinc finger domain, 2B [Homo... LOC100130174 0.010 PREDICTED: hypothetical protein MAP7D1 0.010 MAP7 domain containing 1 LOC440243 0.010 PREDICTED: Putative golgin subfamily A member 6-lik... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.