AFAP1 27631

Name: AFAP1	Sequence: fasta or formatted (730aa)		NCBI GI: 40807504
Description: actin filament associated protein 1		Referenced in: Cytoskeleton
Other entries for this name: alt prot [814aa] actin filament associated protein 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 48 2 C cysteine 2.1 15 1 D aspartate 4.5 33 2 E glutamate 9.0 66 4 F phenylalanine 1.2 9 1 G glycine 6.2 45 2 H histidine 1.8 13 1 I isoleucine 4.1 30 2 K lysine 10.7 78 4 L leucine 9.5 69 2 M methionine 1.1 8 1 N asparagine 3.0 22 1 P proline 7.0 51 4 Q glutamine 4.1 30 2 R arginine 4.8 35 2 S serine 9.6 70 3 T threonine 5.5 40 2 V valine 5.8 42 2 W tryptophan 1.1 8 1 Y tyrosine 2.5 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 actin filament associated protein 1 AFAP1 0.797 actin filament associated protein 1 isoform a [Homo... AFAP1L1 0.401 actin filament associated protein 1-like 1 isoform 1... AFAP1L1 0.386 actin filament associated protein 1-like 1 isoform ... AFAP1L2 0.225 KIAA1914 protein isoform 1 AFAP1L2 0.225 KIAA1914 protein isoform 2 FARP1 0.017 FERM, RhoGEF, and pleckstrin domain protein 1 isoform... ARHGAP25 0.017 Rho GTPase activating protein 25 isoform a ARHGAP25 0.017 Rho GTPase activating protein 25 isoform b ARHGAP12 0.015 Rho GTPase activating protein 12 FGD4 0.015 FYVE, RhoGEF and PH domain containing 4 LOC100133758 0.015 PREDICTED: hypothetical protein, partial FARP2 0.014 FERM, RhoGEF and pleckstrin domain protein 2 PLEKHA6 0.014 phosphoinositol 3-phosphate-binding protein-3 CALD1 0.013 caldesmon 1 isoform 5 CALD1 0.013 caldesmon 1 isoform 4 CALD1 0.013 caldesmon 1 isoform 3 CALD1 0.013 caldesmon 1 isoform 2 CALD1 0.013 caldesmon 1 isoform 1 MYH9 0.013 myosin, heavy polypeptide 9, non-muscle INCENP 0.013 inner centromere protein antigens 135/155kDa isofor... INCENP 0.013 inner centromere protein antigens 135/155kDa isofor... PLEC1 0.013 plectin 1 isoform 11 PLEC1 0.013 plectin 1 isoform 10 PLEC1 0.013 plectin 1 isoform 8 PLEC1 0.013 plectin 1 isoform 7 PLEC1 0.013 plectin 1 isoform 6 PLEC1 0.013 plectin 1 isoform 3 PLEC1 0.013 plectin 1 isoform 2 PLEC1 0.013 plectin 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.