Guide to the Human Genome
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Name: FAM184B Sequence: fasta or formatted (1060aa) NCBI GI: 210032790
Description:

hypothetical protein LOC27146

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         97           2
 C cysteine            1.5         16           1
 D aspartate           3.9         41           1
 E glutamate          13.7        145           3
 F phenylalanine       1.1         12           1
 G glycine             4.2         45           2
 H histidine           2.4         25           1
 I isoleucine          2.0         21           2
 K lysine              8.3         88           4
 L leucine            11.1        118           3
 M methionine          2.1         22           2
 N asparagine          2.2         23           1
 P proline             3.5         37           2
 Q glutamine          11.0        117           2
 R arginine            7.4         78           2
 S serine              6.8         72           2
 T threonine           4.4         47           2
 V valine              3.4         36           2
 W tryptophan          0.6          6           1
 Y tyrosine            1.3         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC27146 
FAM184A               0.172   hypothetical protein LOC79632 isoform 1 
FAM184A               0.118   hypothetical protein LOC79632 isoform 2 
NUMA1                 0.058   nuclear mitotic apparatus protein 1 
PLEC1                 0.057   plectin 1 isoform 11 
PLEC1                 0.057   plectin 1 isoform 10 
PLEC1                 0.057   plectin 1 isoform 8 
PLEC1                 0.057   plectin 1 isoform 7 
PLEC1                 0.057   plectin 1 isoform 6 
PLEC1                 0.057   plectin 1 isoform 3 
PLEC1                 0.057   plectin 1 isoform 2 
PLEC1                 0.057   plectin 1 isoform 1 
MYH9                  0.055   myosin, heavy polypeptide 9, non-muscle 
TCHH                  0.054   trichohyalin 
MYH7B                 0.053   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH3                  0.052   myosin, heavy chain 3, skeletal muscle, embryonic [H...
CLIP1                 0.051   restin isoform a 
MYH14                 0.051   myosin, heavy chain 14 isoform 1 
MYH14                 0.051   myosin, heavy chain 14 isoform 2 
MYH14                 0.051   myosin, heavy chain 14 isoform 3 
LOC283685             0.051   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYH10                 0.050   myosin, heavy polypeptide 10, non-muscle 
GOLGA4                0.050   golgi autoantigen, golgin subfamily a, 4 
MYH13                 0.050   myosin, heavy polypeptide 13, skeletal muscle [Homo...
CLIP1                 0.049   restin isoform b 
CROCC                 0.049   ciliary rootlet coiled-coil 
MYH11                 0.049   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.049   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.049   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.049   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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