Guide to the Human Genome
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Name: AFAP1L2 Sequence: fasta or formatted (818aa) NCBI GI: 50897850
Description:

KIAA1914 protein isoform 1

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [814aa] KIAA1914 protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         52           2
 C cysteine            2.0         16           1
 D aspartate           5.9         48           2
 E glutamate          10.8         88           2
 F phenylalanine       1.1          9           1
 G glycine             4.5         37           1
 H histidine           1.6         13           1
 I isoleucine          2.9         24           1
 K lysine              8.8         72           3
 L leucine            10.8         88           3
 M methionine          1.1          9           1
 N asparagine          3.3         27           1
 P proline             7.1         58           3
 Q glutamine           4.6         38           2
 R arginine            4.5         37           2
 S serine              9.9         81           4
 T threonine           5.0         41           2
 V valine              5.9         48           3
 W tryptophan          1.1          9           1
 Y tyrosine            2.8         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KIAA1914 protein isoform 1 
AFAP1L2               0.992   KIAA1914 protein isoform 2 
AFAP1                 0.263   actin filament associated protein 1 isoform a [Homo...
AFAP1                 0.201   actin filament associated protein 1 
AFAP1L1               0.178   actin filament associated protein 1-like 1 isoform ...
AFAP1L1               0.178   actin filament associated protein 1-like 1 isoform 1...
TRIOBP                0.018   TRIO and F-actin binding protein isoform 6 
TRIOBP                0.018   TRIO and F-actin binding protein isoform 1 
TRIOBP                0.016   TRIO and F-actin binding protein isoform 2 
MYH3                  0.013   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH13                 0.013   myosin, heavy polypeptide 13, skeletal muscle [Homo...
LOC100133220          0.013   PREDICTED: hypothetical protein 
MYH8                  0.012   myosin, heavy chain 8, skeletal muscle, perinatal [...
CHAF1A                0.012   chromatin assembly factor 1, subunit A (p150) 
MYH2                  0.011   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.011   myosin, heavy chain 2, skeletal muscle, adult [Homo...
HMMR                  0.011   hyaluronan-mediated motility receptor isoform d [Ho...
HMMR                  0.011   hyaluronan-mediated motility receptor isoform a [Ho...
HMMR                  0.011   hyaluronan-mediated motility receptor isoform c [Ho...
HMMR                  0.011   hyaluronan-mediated motility receptor isoform b [Ho...
MYH1                  0.011   myosin, heavy chain 1, skeletal muscle, adult [Homo...
TCHH                  0.011   trichohyalin 
TSKS                  0.011   testis-specific kinase substrate 
CLIP1                 0.011   restin isoform b 
CLIP1                 0.011   restin isoform a 
MAP7D1                0.011   MAP7 domain containing 1 
MYH7                  0.010   myosin, heavy chain 7, cardiac muscle, beta 
CEP135                0.010   centrosome protein 4 
CENPF                 0.010   centromere protein F 
ASPH                  0.010   aspartate beta-hydroxylase isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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