Guide to the Human Genome
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Name: RAPGEF3 Sequence: fasta or formatted (923aa) NCBI GI: 148747859
Description:

Rap guanine nucleotide exchange factor 3 isoform a

Referenced in:

Ras

Other entries for this name:
alt prot [881aa] Rap guanine nucleotide exchange factor 3 isoform b
alt prot [881aa] Rap guanine nucleotide exchange factor 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         67           2
 C cysteine            2.1         19           2
 D aspartate           4.7         43           2
 E glutamate           6.7         62           3
 F phenylalanine       2.8         26           2
 G glycine             5.9         54           2
 H histidine           4.4         41           2
 I isoleucine          2.9         27           2
 K lysine              3.5         32           1
 L leucine            13.8        127           3
 M methionine          2.1         19           2
 N asparagine          3.3         30           1
 P proline             6.2         57           2
 Q glutamine           4.8         44           2
 R arginine            7.7         71           3
 S serine              7.0         65           2
 T threonine           4.3         40           2
 V valine              7.6         70           2
 W tryptophan          1.6         15           1
 Y tyrosine            1.5         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rap guanine nucleotide exchange factor 3 isoform a ... 
RAPGEF3               0.952   Rap guanine nucleotide exchange factor 3 isoform b ...
RAPGEF3               0.952   Rap guanine nucleotide exchange factor 3 isoform b [...
RAPGEF4               0.428   Rap guanine nucleotide exchange factor (GEF) 4 isof...
RAPGEF4               0.428   Rap guanine nucleotide exchange factor (GEF) 4 isof...
RAPGEF5               0.192   Rap guanine nucleotide exchange factor (GEF) 5 [Hom...
RAPGEFL1              0.128   Rap guanine nucleotide exchange factor (GEF)-like 1 [...
RAPGEF2               0.070   Rap guanine nucleotide exchange factor 2 
RAPGEF6               0.066   PDZ domain-containing guanine nucleotide exchange fa...
LOC100133567          0.055   PREDICTED: similar to Rap guanine nucleotide exchan...
RAPGEF1               0.044   guanine nucleotide-releasing factor 2 isoform b [Hom...
RAPGEF1               0.044   guanine nucleotide-releasing factor 2 isoform a [Hom...
RASGEF1B              0.034   RasGEF domain family, member 1B 
RASGEF1C              0.034   RasGEF domain family, member 1C 
RALGPS2               0.032   Ral GEF with PH domain and SH3 binding motif 2 [Homo...
RASGRP3               0.031   RAS guanyl releasing protein 3 (calcium and DAG-reg...
RASGRP3               0.031   RAS guanyl releasing protein 3 (calcium and DAG-regu...
RASGRF2               0.031   Ras protein-specific guanine nucleotide-releasing fa...
RASGRP3               0.031   RAS guanyl releasing protein 3 (calcium and DAG-regul...
RASGRF1               0.029   Ras protein-specific guanine nucleotide-releasing f...
RASGRF1               0.029   Ras protein-specific guanine nucleotide-releasing fa...
RASGRF1               0.029   Ras protein-specific guanine nucleotide-releasing fa...
RASGRP1               0.029   RAS guanyl releasing protein 1 isoform b 
RASGRP1               0.029   RAS guanyl releasing protein 1 isoform a 
RALGPS1               0.029   Ral GEF with PH domain and SH3 binding motif 1 
SOS1                  0.025   son of sevenless homolog 1 
RASGEF1A              0.024   RasGEF domain family, member 1A 
SOS2                  0.024   son of sevenless homolog 2 
RASGRP2               0.023   RAS guanyl releasing protein 2 
RASGRP2               0.023   RAS guanyl releasing protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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