Guide to the Human Genome
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Name: RGL1 Sequence: fasta or formatted (803aa) NCBI GI: 93102367
Description:

ral guanine nucleotide dissociation stimulator-like 1

Referenced in:

Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         40           3
 C cysteine            2.1         17           1
 D aspartate           4.7         38           1
 E glutamate           9.0         72           5
 F phenylalanine       3.2         26           1
 G glycine             4.1         33           2
 H histidine           2.0         16           2
 I isoleucine          5.4         43           2
 K lysine              6.6         53           2
 L leucine             9.6         77           3
 M methionine          2.9         23           2
 N asparagine          4.6         37           3
 P proline             4.2         34           2
 Q glutamine           5.2         42           2
 R arginine            5.0         40           3
 S serine             11.0         88           4
 T threonine           6.8         55           2
 V valine              5.4         43           2
 W tryptophan          1.2         10           1
 Y tyrosine            2.0         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ral guanine nucleotide dissociation stimulator-like ... 
RALGDS                0.316   ral guanine nucleotide dissociation stimulator isofo...
RALGDS                0.316   ral guanine nucleotide dissociation stimulator isof...
RGL3                  0.268   ral guanine nucleotide dissociation stimulator-like...
RGL3                  0.268   ral guanine nucleotide dissociation stimulator-like...
RGL2                  0.210   ral guanine nucleotide dissociation stimulator-like 2...
RGL4                  0.129   ral guanine nucleotide dissociation stimulator-like ...
RASGRF1               0.073   Ras protein-specific guanine nucleotide-releasing f...
RASGRF1               0.073   Ras protein-specific guanine nucleotide-releasing fa...
RASGRF1               0.073   Ras protein-specific guanine nucleotide-releasing fa...
RASGRF2               0.067   Ras protein-specific guanine nucleotide-releasing fa...
SOS1                  0.064   son of sevenless homolog 1 
SOS2                  0.060   son of sevenless homolog 2 
RALGPS1               0.054   Ral GEF with PH domain and SH3 binding motif 1 
RALGPS2               0.052   Ral GEF with PH domain and SH3 binding motif 2 [Homo...
RASGRP3               0.047   RAS guanyl releasing protein 3 (calcium and DAG-regul...
RASGRP3               0.045   RAS guanyl releasing protein 3 (calcium and DAG-reg...
RASGRP3               0.045   RAS guanyl releasing protein 3 (calcium and DAG-regu...
RAPGEF1               0.042   guanine nucleotide-releasing factor 2 isoform b [Hom...
RAPGEF1               0.042   guanine nucleotide-releasing factor 2 isoform a [Hom...
RASGEF1B              0.036   RasGEF domain family, member 1B 
RASGEF1A              0.036   RasGEF domain family, member 1A 
RASGEF1C              0.034   RasGEF domain family, member 1C 
RASGRP2               0.033   RAS guanyl releasing protein 2 
RASGRP2               0.033   RAS guanyl releasing protein 2 
RASGRP2               0.033   RAS guanyl releasing protein 2 
RAPGEF6               0.032   PDZ domain-containing guanine nucleotide exchange fa...
RAPGEF2               0.031   Rap guanine nucleotide exchange factor 2 
RASGRP1               0.029   RAS guanyl releasing protein 1 isoform b 
RASGRP1               0.029   RAS guanyl releasing protein 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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