Guide to the Human Genome
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Name: RALGPS2 Sequence: fasta or formatted (583aa) NCBI GI: 32441283
Description:

Ral GEF with PH domain and SH3 binding motif 2

Referenced in:

Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         46           2
 C cysteine            1.0          6           1
 D aspartate           4.1         24           2
 E glutamate           6.3         37           2
 F phenylalanine       3.3         19           1
 G glycine             4.8         28           1
 H histidine           2.9         17           1
 I isoleucine          4.1         24           2
 K lysine              7.4         43           2
 L leucine             9.8         57           2
 M methionine          2.9         17           2
 N asparagine          4.6         27           2
 P proline             5.1         30           2
 Q glutamine           3.4         20           2
 R arginine            4.5         26           2
 S serine             11.7         68           4
 T threonine           5.3         31           2
 V valine              5.5         32           2
 W tryptophan          1.4          8           1
 Y tyrosine            3.9         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ral GEF with PH domain and SH3 binding motif 2 [Homo... 
RALGPS1               0.583   Ral GEF with PH domain and SH3 binding motif 1 
RASGRF1               0.093   Ras protein-specific guanine nucleotide-releasing f...
RASGRF1               0.093   Ras protein-specific guanine nucleotide-releasing fa...
RASGRF1               0.093   Ras protein-specific guanine nucleotide-releasing fa...
RASGRF2               0.091   Ras protein-specific guanine nucleotide-releasing fa...
SOS1                  0.077   son of sevenless homolog 1 
RGL3                  0.076   ral guanine nucleotide dissociation stimulator-like...
RGL3                  0.075   ral guanine nucleotide dissociation stimulator-like...
RGL1                  0.072   ral guanine nucleotide dissociation stimulator-like ...
RAPGEF1               0.068   guanine nucleotide-releasing factor 2 isoform b [Hom...
RAPGEF1               0.068   guanine nucleotide-releasing factor 2 isoform a [Hom...
SOS2                  0.068   son of sevenless homolog 2 
RALGDS                0.066   ral guanine nucleotide dissociation stimulator isofo...
RALGDS                0.066   ral guanine nucleotide dissociation stimulator isof...
RGL4                  0.061   ral guanine nucleotide dissociation stimulator-like ...
RGL2                  0.058   ral guanine nucleotide dissociation stimulator-like 2...
RAPGEF2               0.058   Rap guanine nucleotide exchange factor 2 
RAPGEF4               0.057   Rap guanine nucleotide exchange factor (GEF) 4 isof...
RAPGEF4               0.057   Rap guanine nucleotide exchange factor (GEF) 4 isof...
RAPGEF5               0.056   Rap guanine nucleotide exchange factor (GEF) 5 [Hom...
RASGRP3               0.054   RAS guanyl releasing protein 3 (calcium and DAG-reg...
RASGRP3               0.054   RAS guanyl releasing protein 3 (calcium and DAG-regu...
RASGRP3               0.054   RAS guanyl releasing protein 3 (calcium and DAG-regul...
RAPGEFL1              0.052   Rap guanine nucleotide exchange factor (GEF)-like 1 [...
RAPGEF3               0.052   Rap guanine nucleotide exchange factor 3 isoform b ...
RAPGEF3               0.052   Rap guanine nucleotide exchange factor 3 isoform b [...
RAPGEF3               0.052   Rap guanine nucleotide exchange factor 3 isoform a ...
RASGRP1               0.048   RAS guanyl releasing protein 1 isoform a 
RASGRP2               0.048   RAS guanyl releasing protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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