Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 5454088
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32
family, member B [Homo sapiens]
(251 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 505 e-143
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 399 e-111
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 399 e-111
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 347 7e-96
gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 fami... 296 9e-81
gi|6912604 acidic nuclear phosphoprotein 32C [Homo sapiens] 261 4e-70
gi|239745256 PREDICTED: similar to hCG1791241 [Homo sapiens] 250 7e-67
gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 240 1e-63
gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 214 4e-56
gi|21071028 acidic nuclear phosphoprotein 32D [Homo sapiens] 187 1e-47
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 82 3e-16
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 78 6e-15
gi|55956788 nucleolin [Homo sapiens] 77 1e-14
gi|115529449 upstream binding transcription factor, RNA polymera... 77 1e-14
gi|115529451 upstream binding transcription factor, RNA polymera... 77 1e-14
gi|7657671 upstream binding transcription factor, RNA polymerase... 77 1e-14
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 77 1e-14
gi|21735415 centromere protein B [Homo sapiens] 74 9e-14
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 71 1e-12
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 71 1e-12
gi|17975763 myelin transcription factor 1 [Homo sapiens] 68 7e-12
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 67 1e-11
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 66 3e-11
gi|21361639 DIPB protein [Homo sapiens] 65 4e-11
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 65 6e-11
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 65 6e-11
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 64 1e-10
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 64 1e-10
gi|4506411 Ran GTPase activating protein 1 [Homo sapiens] 64 1e-10
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 64 2e-10
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 505 bits (1300), Expect = e-143
Identities = 251/251 (100%), Positives = 251/251 (100%)
Query: 1 MDMKRRIHLELRNRTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNL 60
MDMKRRIHLELRNRTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNL
Sbjct: 1 MDMKRRIHLELRNRTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNL 60
Query: 61 PKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDL 120
PKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDL
Sbjct: 61 PKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDL 120
Query: 121 FNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDE 180
FNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDE
Sbjct: 121 FNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDE 180
Query: 181 DDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKR 240
DDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKR
Sbjct: 181 DDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKR 240
Query: 241 KRETDDEGEDD 251
KRETDDEGEDD
Sbjct: 241 KRETDDEGEDD 251
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 399 bits (1026), Expect = e-111
Identities = 202/233 (86%), Positives = 213/233 (91%), Gaps = 2/233 (0%)
Query: 17 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNLPKLPKLKKLELSENRI 76
A VRE VLDNCKSND KIE LTAEFVNLEFL LINVGLIS+SNLPKLPKLKK LSENRI
Sbjct: 37 ARVREHVLDNCKSNDWKIESLTAEFVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRI 96
Query: 77 FGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVF 136
FGGL+M AEKLPNLTHLNLSG KLKDISTLEPLKKLECLKSLDLFNCEV NLNDY+ESVF
Sbjct: 97 FGGLNMSAEKLPNLTHLNLSGKKLKDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVF 156
Query: 137 KLLPQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDE 196
KLLPQLT LD YD EDQEAPDSDA+VDGVD+EEEDEEGEDE+D ++EDGEEEE DEE+DE
Sbjct: 157 KLLPQLTCLDTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDE 216
Query: 197 DEDVEGDEDDDEVSEEEEEFGL--DEEDEDEDEDEEEEEGGKGEKRKRETDDE 247
DEDVEGD+D DEVSEEEEEFGL DE+DEDEDEDEEEEE GKGE RKRETDDE
Sbjct: 217 DEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDE 269
>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 399 bits (1026), Expect = e-111
Identities = 202/233 (86%), Positives = 213/233 (91%), Gaps = 2/233 (0%)
Query: 17 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNLPKLPKLKKLELSENRI 76
A VRE VLDNCKSND KIE LTAEFVNLEFL LINVGLIS+SNLPKLPKLKK LSENRI
Sbjct: 37 ARVREHVLDNCKSNDWKIESLTAEFVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRI 96
Query: 77 FGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVF 136
FGGL+M AEKLPNLTHLNLSG KLKDISTLEPLKKLECLKSLDLFNCEV NLNDY+ESVF
Sbjct: 97 FGGLNMSAEKLPNLTHLNLSGKKLKDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVF 156
Query: 137 KLLPQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDE 196
KLLPQLT LD YD EDQEAPDSDA+VDGVD+EEEDEEGEDE+D ++EDGEEEE DEE+DE
Sbjct: 157 KLLPQLTCLDTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDE 216
Query: 197 DEDVEGDEDDDEVSEEEEEFGL--DEEDEDEDEDEEEEEGGKGEKRKRETDDE 247
DEDVEGD+D DEVSEEEEEFGL DE+DEDEDEDEEEEE GKGE RKRETDDE
Sbjct: 217 DEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDE 269
>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member A [Homo sapiens]
Length = 249
Score = 347 bits (889), Expect = 7e-96
Identities = 178/254 (70%), Positives = 216/254 (85%), Gaps = 9/254 (3%)
Query: 1 MDMKRRIHLELRNRTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNL 60
M+M RRIHLELRNRTP+ V+ELVLDN +SN+GK+EGLT EF LEFLS INVGL S++NL
Sbjct: 1 MEMGRRIHLELRNRTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANL 60
Query: 61 PKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDL 120
PKL KLKKLELS+NR+ GGL++LAEK PNLTHLNLSGNK+KD+ST+EPLKKLE LKSLDL
Sbjct: 61 PKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDL 120
Query: 121 FNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDSDAE--VDGVDEEEEDEEGEDEE 178
FNCEVTNLNDYRE+VFKLLPQLTYLDGYDR+D+EAPDSDAE V+G+D+EEEDE +E
Sbjct: 121 FNCEVTNLNDYRENVFKLLPQLTYLDGYDRDDKEAPDSDAEGYVEGLDDEEEDE----DE 176
Query: 179 DEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEE-EEGGKG 237
+E DED + E +E+DEDE+ EG+E+D EEE+E G ++ + D++EDEEE E +G
Sbjct: 177 EEYDEDAQVVE--DEEDEDEEEEGEEEDVSGEEEEDEEGYNDGEVDDEEDEEELGEEERG 234
Query: 238 EKRKRETDDEGEDD 251
+KRKRE +DEGEDD
Sbjct: 235 QKRKREPEDEGEDD 248
>gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member E isoform 1 [Homo sapiens]
Length = 268
Score = 296 bits (759), Expect = 9e-81
Identities = 155/266 (58%), Positives = 202/266 (75%), Gaps = 15/266 (5%)
Query: 1 MDMKRRIHLELRNRTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNL 60
M+MK++I+LELRNR+P V ELVLDNC +G+IEGL F LEFLS+ NV L S++ L
Sbjct: 1 MEMKKKINLELRNRSPEEVTELVLDNCLCVNGEIEGLNDTFKELEFLSMANVELSSLARL 60
Query: 61 PKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDL 120
P L KL+KLELS+N I GGL++LAEK PNLT+LNLSGNK+KD+ST+E L+ L+ LKSLDL
Sbjct: 61 PSLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDL 120
Query: 121 FNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDE 180
FNCE+TNL DYRES+F+LL Q+TYLDG+D+ED EAPDS+ E D +E+++EE E+E
Sbjct: 121 FNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGP 180
Query: 181 DDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGL---------DEEDEDE-----D 226
+ EEEE +EE+DEDED + DE E+ E EEE GL DEED+D+ +
Sbjct: 181 PEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGE 240
Query: 227 EDEEEEEGG-KGEKRKRETDDEGEDD 251
E+EEEEEGG +GEKRKR+ +D+GE++
Sbjct: 241 EEEEEEEGGLRGEKRKRDAEDDGEEE 266
>gi|6912604 acidic nuclear phosphoprotein 32C [Homo sapiens]
Length = 234
Score = 261 bits (667), Expect = 4e-70
Identities = 148/244 (60%), Positives = 186/244 (76%), Gaps = 13/244 (5%)
Query: 1 MDMKRRIHLELRNRTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNL 60
M+M RRIH ELRNR P+ V+EL LDN +SN+GK+E LT EF LEFLS IN GL S+S+L
Sbjct: 1 MEMGRRIHSELRNRAPSDVKELALDNSRSNEGKLEALTDEFEELEFLSKINGGLTSISDL 60
Query: 61 PKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDL 120
PKL KL+KLEL R+ GGL++LAEK PNLTHL LSGNK+KD+ST+EPLK+LE LKSLDL
Sbjct: 61 PKL-KLRKLEL---RVSGGLEVLAEKCPNLTHLYLSGNKIKDLSTIEPLKQLENLKSLDL 116
Query: 121 FNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDSDAE--VDGVDEEEEDEEGEDEE 178
FNCEVTNLNDY E+VFKLL QLTYLD + +EAP SD E V+G+D+EEE E E+E
Sbjct: 117 FNCEVTNLNDYGENVFKLLLQLTYLDSCYWDHKEAPYSDIEDHVEGLDDEEEGEH-EEEY 175
Query: 179 DEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEE-EEGGKG 237
DED + E+EE +EE++ EG+E+D +EE+E G ++ + D +EDEEE E +G
Sbjct: 176 DEDAQVVEDEEGEEEEE-----EGEEEDVSGGDEEDEEGYNDGEVDGEEDEEELGEEERG 230
Query: 238 EKRK 241
+KRK
Sbjct: 231 QKRK 234
>gi|239745256 PREDICTED: similar to hCG1791241 [Homo sapiens]
Length = 450
Score = 250 bits (639), Expect = 7e-67
Identities = 128/146 (87%), Positives = 133/146 (91%)
Query: 17 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNLPKLPKLKKLELSENRI 76
A VRE VLDNCKSND KIE LTAEFVNLEFL LINVGLIS+SNLPKLPKLKK LSENRI
Sbjct: 37 ARVREHVLDNCKSNDWKIESLTAEFVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRI 96
Query: 77 FGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVF 136
FGGL+M AEKLPNLTHLNLSG KLKDISTLEPLKKLECLKSLDLFNCEV NLNDY+ESVF
Sbjct: 97 FGGLNMSAEKLPNLTHLNLSGKKLKDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVF 156
Query: 137 KLLPQLTYLDGYDREDQEAPDSDAEV 162
KLLPQLT LD YD EDQEAPDSDA++
Sbjct: 157 KLLPQLTCLDTYDPEDQEAPDSDAQL 182
>gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 3 [Homo sapiens]
Length = 220
Score = 240 bits (612), Expect = 1e-63
Identities = 125/218 (57%), Positives = 165/218 (75%), Gaps = 15/218 (6%)
Query: 49 LINVGLISVSNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEP 108
+ NV L S++ LP L KL+KLELS+N I GGL++LAEK PNLT+LNLSGNK+KD+ST+E
Sbjct: 1 MANVELSSLARLPSLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEA 60
Query: 109 LKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDSDAEVDGVDEE 168
L+ L+ LKSLDLFNCE+TNL DYRES+F+LL Q+TYLDG+D+ED EAPDS+ E D +E
Sbjct: 61 LQNLKNLKSLDLFNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSEEEDDEDGDE 120
Query: 169 EEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGL---------D 219
+++EE E+E + EEEE +EE+DEDED + DE E+ E EEE GL D
Sbjct: 121 DDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQD 180
Query: 220 EEDEDE-----DEDEEEEEGG-KGEKRKRETDDEGEDD 251
EED+D+ +E+EEEEEGG +GEKRKR+ +D+GE++
Sbjct: 181 EEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEEE 218
>gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 2 [Homo sapiens]
Length = 227
Score = 214 bits (546), Expect = 4e-56
Identities = 125/266 (46%), Positives = 165/266 (62%), Gaps = 56/266 (21%)
Query: 1 MDMKRRIHLELRNRTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNL 60
M+MK++I+LELRNR+P V ELVLDNC +G+IEGL F LEFLS+ NV L S++ L
Sbjct: 1 MEMKKKINLELRNRSPEEVTELVLDNCLCVNGEIEGLNDTFKELEFLSMANVELSSLARL 60
Query: 61 PKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDL 120
P L NKL+ + L+ LKSLDL
Sbjct: 61 PSL----------------------------------NKLRK-------QNLKNLKSLDL 79
Query: 121 FNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDE 180
FNCE+TNL DYRES+F+LL Q+TYLDG+D+ED EAPDS+ E D +E+++EE E+E
Sbjct: 80 FNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGP 139
Query: 181 DDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGL---------DEEDEDE-----D 226
+ EEEE +EE+DEDED + DE E+ E EEE GL DEED+D+ +
Sbjct: 140 PEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGE 199
Query: 227 EDEEEEEGG-KGEKRKRETDDEGEDD 251
E+EEEEEGG +GEKRKR+ +D+GE++
Sbjct: 200 EEEEEEEGGLRGEKRKRDAEDDGEEE 225
>gi|21071028 acidic nuclear phosphoprotein 32D [Homo sapiens]
Length = 131
Score = 187 bits (474), Expect = 1e-47
Identities = 93/131 (70%), Positives = 111/131 (84%)
Query: 1 MDMKRRIHLELRNRTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNL 60
M+M + IHLELRNRTP+ V+EL LDN +SN+GK+EGLT EF LE L+ IN+GL S++NL
Sbjct: 1 MEMGKWIHLELRNRTPSDVKELFLDNSQSNEGKLEGLTDEFEELELLNTINIGLTSIANL 60
Query: 61 PKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDL 120
PKL KLKKLELS NR GL++LAEK PNL HLNLSGNK+KD+ST+EPLKKLE L+SLDL
Sbjct: 61 PKLNKLKKLELSSNRASVGLEVLAEKCPNLIHLNLSGNKIKDLSTIEPLKKLENLESLDL 120
Query: 121 FNCEVTNLNDY 131
F CEVTNLN+Y
Sbjct: 121 FTCEVTNLNNY 131
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 82.4 bits (202), Expect = 3e-16
Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDE-EGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEV 209
E++E + E +G EEE +E EGE+E +E + +GEEEE + E +E+ + EG+E++ E
Sbjct: 843 EEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEG 902
Query: 210 SEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGED 250
EEE G EE+E E + EEE E G+GE + E + EGED
Sbjct: 903 EGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGED 943
Score = 78.2 bits (191), Expect = 6e-15
Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 8/111 (7%)
Query: 149 DREDQEAPDSDAEVDGVDEEEE----DEEGEDEEDEDDEDGEEEEFDEEDD---EDEDVE 201
+RE++E E +G EEEE +EEGE + +E+ E+GE EE EE + E+E+ E
Sbjct: 825 EREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGE 884
Query: 202 GDEDDDEVSEEEEEFGLDE-EDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
G+ +++ E EEE G E E+E E E EEEE GKGE+ E + EGE++
Sbjct: 885 GEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEE 935
Score = 77.4 bits (189), Expect = 1e-14
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205
+G E+ E + + E + + E ED EGE EE+E + +GEEEE + E +E+ + EG+E
Sbjct: 918 EGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEG 977
Query: 206 DDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
+ E EEEE G EE+E E+E EEE EG + + + E ++EGE
Sbjct: 978 EGE-GEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGE 1020
Score = 77.0 bits (188), Expect = 1e-14
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205
+G E+ E + E +G EEE+ EGE EE+E +E+GEEE EE+ E E E +E
Sbjct: 963 EGEGEEEGEGEGEEGEGEG---EEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEG 1019
Query: 206 DDEVSEEEEEF-GLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
+ E E EE G EE+E E+E EE E+ G+GE+ +R ++E E++
Sbjct: 1020 EVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEE 1066
Score = 75.1 bits (183), Expect = 5e-14
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 7/112 (6%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDE-EGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDE 204
+G E++ + + E +G EEEE E +GE+E +E + +GEEEE E + ED + EG+E
Sbjct: 892 EGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEE-GEGEGEDGEGEGEE 950
Query: 205 DDDEVSEEEEEFGLDEEDEDEDEDEE-----EEEGGKGEKRKRETDDEGEDD 251
++ E EEEE + E+E E E EE EEE G+GE + E ++EGE++
Sbjct: 951 EEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEE 1002
Score = 74.7 bits (182), Expect = 7e-14
Identities = 40/105 (38%), Positives = 62/105 (59%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205
+G + E + + + E +EE E+ EGE EE+E + +GEEE E ++E+ + EG+E+
Sbjct: 848 EGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEE 907
Query: 206 DDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGED 250
+ EEEE G EE+ +E E E EEE G+GE E + E E+
Sbjct: 908 GEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEE 952
Score = 73.9 bits (180), Expect = 1e-13
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDED--DEDGEEEEFDEEDDEDEDVEGD 203
+G E+ E + E +G EEE + EGE+EE E +E+GEE E + E++E E EG+
Sbjct: 884 EGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEG-EGE 942
Query: 204 EDDDEVSEEEEEF-GLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
+ + E EEE E+ G +EE E E E+E E EG +GE E + EGE +
Sbjct: 943 DGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGE 991
Score = 73.2 bits (178), Expect = 2e-13
Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDE-EGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDE 204
+G E+ E + E +G EEE +E EGE EE+E + +GE+ E + E++E E EG+E
Sbjct: 901 EGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGE-WEGEE 959
Query: 205 DDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
++ E EEE G EE E E E+EE E G+ E+ + E ++EGE +
Sbjct: 960 EEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGE 1006
Score = 71.6 bits (174), Expect = 6e-13
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
+ E+ E + E G E E EEG+ E +E++E+GE EE +E + E+E+ EG+E++ E
Sbjct: 797 EEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEE-EEGEGEEEEGEGEEEEGE 855
Query: 209 -VSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
EEE E G EE+ +E E E EEE G+GE + E + EGE++
Sbjct: 856 GKGEEEGEEGEGEEEGEEGEGEGEEEEGEGE-GEEEGEGEGEEE 898
Score = 71.2 bits (173), Expect = 8e-13
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEE---DEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEG 202
+G D E E + + E +G +EE E +EEGE E +E + +GEEEE + E +E+E G
Sbjct: 940 EGEDGEG-EGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEE---G 995
Query: 203 DEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEG--GKGEKRKRETDDEGED 250
+E+ +E E EEE + E+E+E E E E EG G+GE + E ++EGE+
Sbjct: 996 EEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEE 1045
Score = 70.9 bits (172), Expect = 1e-12
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 14/115 (12%)
Query: 150 REDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGE-------------EEEFDEEDDE 196
+E++ + E +G E E+EE E +E +E GE EEE +E + E
Sbjct: 777 KEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGE 836
Query: 197 DEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
+E+ EG+E++ E EEE E G EE+ +E E EEE E G+GE + E + EGE++
Sbjct: 837 EEEGEGEEEEGEGEEEEGE-GKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEE 890
Score = 70.9 bits (172), Expect = 1e-12
Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVS 210
E E + E + EEE+EEGE EE+E +GEEEE + E++E E +E ++
Sbjct: 810 EGGEVEGGEVEEGKGEREEEEEEGEGEEEEG--EGEEEEGEGEEEEGEGKGEEEGEEGEG 867
Query: 211 EEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
EEE E G E +E+E E E EEE G+GE + E + EGE++
Sbjct: 868 EEEGEEGEGEGEEEEGEGEGEEE-GEGEGEEEEGEGEGEEE 907
Score = 70.5 bits (171), Expect = 1e-12
Identities = 43/109 (39%), Positives = 67/109 (61%), Gaps = 8/109 (7%)
Query: 149 DREDQEAPDSDAEVDGVDEEE---EDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205
+ E+ E + E +G EEE E EEGE E +E++ +GE EE + E++ +E+ EG+E+
Sbjct: 949 EEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEE 1008
Query: 206 DDEVSEEEEEFGLDEE---DEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
+ EEEEE ++ E +E E E EEEE G+ E +RE + EGE++
Sbjct: 1009 GEGEGEEEEEGEVEGEVEGEEGEGEGEEEE--GEEEGEEREKEGEGEEN 1055
Score = 70.1 bits (170), Expect = 2e-12
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 18/118 (15%)
Query: 149 DREDQEAPDSDAEVDGVDE--EEEDEEGEDEEDEDDEDGEEEEFD-------------EE 193
+RE +E E G +E EEE ++GE EE+E + GEE+E E
Sbjct: 767 EREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGER 826
Query: 194 DDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
++E+E+ EG+E++ E EEE E EE+E E + EEE E G+GE+ E + EGE++
Sbjct: 827 EEEEEEGEGEEEEGEGEEEEGE---GEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEE 881
Score = 70.1 bits (170), Expect = 2e-12
Identities = 44/115 (38%), Positives = 68/115 (59%), Gaps = 9/115 (7%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDE-DGEEEEFDEEDDEDEDVEGDE 204
+G E+ E + + E + + E E+EEGE E +E+ E +GEEEE + E +E+ + EG+E
Sbjct: 855 EGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEE 914
Query: 205 DD-----DEVSEEEEEFGLDEEDEDEDEDEE---EEEGGKGEKRKRETDDEGEDD 251
++ +E EE E G +EE E E ED E EEE G+ E + E + EGE++
Sbjct: 915 EEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEE 969
Score = 68.2 bits (165), Expect = 7e-12
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 27/133 (20%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEE--EDEEGEDEEDEDDEDGEEEEFDE--EDDEDEDVE 201
DG ++E +E + + EE E+E GE EE+E D + EEE+ E E+ E E+VE
Sbjct: 706 DGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVE 765
Query: 202 GDEDDDE-------------VSEEEEEFGLDEEDEDEDEDEEEEEGG----------KGE 238
G+ + +E EEE + G EE+E E EE+EEGG KGE
Sbjct: 766 GEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGE 825
Query: 239 KRKRETDDEGEDD 251
+ + E + EGE++
Sbjct: 826 REEEEEEGEGEEE 838
Score = 68.2 bits (165), Expect = 7e-12
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 12/109 (11%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDE-DVEGDEDDDEV 209
E+ E + E +G EEEE EE +EE E +E+GE E +EE+ E E +VEG+E + E
Sbjct: 975 EEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEG 1034
Query: 210 SEEE-EEFGLDEEDEDEDED------EEEEEGGK----GEKRKRETDDE 247
EEE EE G + E E E E+ EEEEE GK GE+ D E
Sbjct: 1035 EEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGE 1083
Score = 67.8 bits (164), Expect = 9e-12
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 10/110 (9%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEE------DEDDEDGEEEEFD---EEDDEDEDVE 201
E+ E + E +G EEE + EGE+EE +E + +GEEEE + EE+ E+ + E
Sbjct: 872 EEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGE 931
Query: 202 GDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
G+E++ E E E+ G EE+E E E EEEE G+GE+ +EGE +
Sbjct: 932 GEEEEGE-GEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGE 980
Score = 63.9 bits (154), Expect = 1e-10
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 149 DREDQEAPDSDAEVDG----VDEEEEDEEGEDEEDE--DDEDGEEEEFDEEDDEDEDVEG 202
DRE++E + + + +G V+ E E EEGE +++E E+ EEE D+ + E+E+ EG
Sbjct: 744 DREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEG 803
Query: 203 DEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
++ E E E ++E + +E+EEE EG + E E + EGE++
Sbjct: 804 RGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEE 852
Score = 63.5 bits (153), Expect = 2e-10
Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 7/105 (6%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDE---EDEDDEDGEEEEFDEEDDEDEDVEGDEDD- 206
E++E E +G +E EE+ EGE+E E E++E+GE E E + E+ + EG+E++
Sbjct: 982 EEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVE--GEVEGEEGEGEGEEEEG 1039
Query: 207 DEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETD-DEGED 250
+E EE E+ G EE+ E+EEEEEG E + E + +GE+
Sbjct: 1040 EEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGEE 1084
Score = 63.2 bits (152), Expect = 2e-10
Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGE---EEEFDEEDDEDEDVEGDEDDD 207
E++ + + E +G E EE+EEGE E + + E+GE EEE EE+ E+ + EG+ +++
Sbjct: 996 EEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEEN 1055
Query: 208 EVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEG 248
+ EEEE +EE + ++ EEE E GE+ K+ + +G
Sbjct: 1056 RRNREEEE---EEEGKYQETGEEENERQDGEEYKKVSKIKG 1093
Score = 61.2 bits (147), Expect = 8e-10
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 24/121 (19%)
Query: 151 EDQEAPDSDAEVDGVDEEEED----EEGEDEEDEDD---EDGE-------------EEEF 190
E++ + E D +EEE++ EEGE EE E + E+GE EEE
Sbjct: 732 EEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEG 791
Query: 191 DEEDDEDEDVEG----DEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDD 246
D+ + E+E+ EG E+ EV E E G E +E+E+E E EEE G+GE+ + E ++
Sbjct: 792 DQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEE 851
Query: 247 E 247
E
Sbjct: 852 E 852
Score = 60.1 bits (144), Expect = 2e-09
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 150 REDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFD---EEDDEDEDVEGDEDD 206
R + E P + EE + +GE++E ++ E G ++E + EE E+E EG+E++
Sbjct: 683 RGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEE 742
Query: 207 DEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRE---TDDEGEDD 251
+ EEEE+ G +E+ + +E E E E +GE++K E +++GE++
Sbjct: 743 GDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEE 790
Score = 50.4 bits (119), Expect = 1e-06
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDE----DGEEEEFDEEDDEDEDVEGDEDD 206
E++E + D G E E EGE E E +E DGEE+E +E ++ E +++
Sbjct: 672 EEREKGEKDK---GRGEMERPGEGEKELAEKEEWKKRDGEEQE-QKEREQGHQKERNQEM 727
Query: 207 DEVSEEEEEFGLDEEDEDEDEDEEEEEG-GKGEKRKRETDDEGEDD 251
+E EEE G EE+E + E+EEE+EG GK E E + E E +
Sbjct: 728 EEGGEEEH--GEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKE 771
Score = 44.7 bits (104), Expect = 8e-05
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 154 EAPDSDAEVDGVDEEEEDEEGE-DEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEE 212
+A S+ + V E E+ EG D E+ G E DEE ++ E +G + + E
Sbjct: 633 KAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEG 692
Query: 213 EEEFGLDEEDEDEDEDEEEE---EGGKGEKRKRETDDEGEDD 251
E+E EE + D +E+E+ E G ++R +E ++ GE++
Sbjct: 693 EKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEE 734
Score = 43.9 bits (102), Expect = 1e-04
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 166 DEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDE 225
DEE E E + E + GE E+ E +E + +G+E + ++E E G +E E
Sbjct: 671 DEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQE----QKEREQGHQKERNQE 726
Query: 226 DEDEEEEEGGKGEKRKRETDDEGEDD 251
E+ EEE G+GE+ + + ++E E +
Sbjct: 727 MEEGGEEEHGEGEEEEGDREEEEEKE 752
Score = 31.2 bits (69), Expect = 0.89
Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 197 DEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDD 246
DE+VE E+ E +E+ + G++E++ + +E+ + GG+ EK + +DD
Sbjct: 581 DEEVEIPEEK-EGAEDSKGNGIEEQEVEANEENVKVHGGRKEKTEILSDD 629
Score = 30.4 bits (67), Expect = 1.5
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 13/109 (11%)
Query: 156 PDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDD---------EDEDVEGDE-- 204
P + E +E E EE E ED EE+E + ++ E ++ D+
Sbjct: 572 PATTIEAFSDEEVEIPEEKEGAEDSKGNGIEEQEVEANEENVKVHGGRKEKTEILSDDLT 631
Query: 205 DDDEVSEEEEEFGLDEEDEDEDE-DEEEEEGGKG-EKRKRETDDEGEDD 251
D EVSE + + + ED E D EEG G E + E ++GE D
Sbjct: 632 DKAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKD 680
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 78.2 bits (191), Expect = 6e-15
Identities = 38/74 (51%), Positives = 58/74 (78%), Gaps = 3/74 (4%)
Query: 162 VDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEE---EEFGL 218
++ DEEEE+EE E+EE+E++E+ EE+ +EE+DE+E E +E+++E EEE EE L
Sbjct: 883 INSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGEL 942
Query: 219 DEEDEDEDEDEEEE 232
+EE+E+EDE+EEEE
Sbjct: 943 EEEEEEEDEEEEEE 956
Score = 75.9 bits (185), Expect = 3e-14
Identities = 41/93 (44%), Positives = 63/93 (67%), Gaps = 4/93 (4%)
Query: 155 APDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFD-EEDDEDEDVEGDEDDDEVSEEE 213
A + D V ++ +E+EE E+EE+E++E+ EEEE D EE++EDE+ +E+++E E E
Sbjct: 873 ALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFE 932
Query: 214 EEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDD 246
EEF EE+E E E+EEEEE + E+ E +D
Sbjct: 933 EEF---EEEEGELEEEEEEEDEEEEEELEEVED 962
Score = 75.9 bits (185), Expect = 3e-14
Identities = 40/84 (47%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDD-EDEDVEGDEDDDEV 209
ED + ++ + +EEEE+EE E+EE+E++ED EEEE DEE+ E+E+ E +E ++E
Sbjct: 876 EDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEF 935
Query: 210 SEEEEEFGLDEEDEDEDEDEEEEE 233
EEE E +EE+EDE+E+EE EE
Sbjct: 936 EEEEGELEEEEEEEDEEEEEELEE 959
Score = 68.6 bits (166), Expect = 5e-12
Identities = 34/76 (44%), Positives = 55/76 (72%), Gaps = 6/76 (7%)
Query: 176 DEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGG 235
DEE+E++E+ EEEE +EE++E++ E +ED++E EEE EE+E+E E+E EEE G
Sbjct: 887 DEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEE------EEEEEEFEEEFEEEEG 940
Query: 236 KGEKRKRETDDEGEDD 251
+ E+ + E D+E E++
Sbjct: 941 ELEEEEEEEDEEEEEE 956
Score = 62.8 bits (151), Expect = 3e-10
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
+ E++E + + E + +EEEEDEE EE+E++E+ EEEF+EE+ E E+ E +ED++E
Sbjct: 894 EEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEE 953
Query: 209 VSEEEE----EFG 217
E EE EFG
Sbjct: 954 EEELEEVEDLEFG 966
Score = 29.6 bits (65), Expect = 2.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 168 EEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDD 206
EEE E+G D+ E EEE + E + + E ++DD
Sbjct: 1066 EEETEDGSDKVQPPPETPAEEEMETETEAEALQEKEQDD 1104
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 77.4 bits (189), Expect = 1e-14
Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 47/140 (33%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEE-----------------GEDEEDEDDEDGEEEEFDEE 193
+ E D D+E D D+E+EDE+ EDE+DEDDED E+++ DEE
Sbjct: 144 DSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEE 203
Query: 194 DD----------------------------EDEDVEGDEDDDEVSEEEEEFGLDEEDEDE 225
DD EDED E D++D++ ++E++ D+ED++E
Sbjct: 204 DDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEE 263
Query: 226 DEDEEEEEGGKGE--KRKRE 243
+E+EEEEE K KRK+E
Sbjct: 264 EEEEEEEEPVKEAPGKRKKE 283
Score = 72.4 bits (176), Expect = 3e-13
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 39/130 (30%)
Query: 157 DSDAEVDGVDEEEEDEEGEDEEDEDDEDGE-------------EEEFDEEDDEDEDVEGD 203
DSD E D D+ EEDEE +++EDED+++ E E+E DE+D++DED + D
Sbjct: 144 DSDEEED--DDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDD 201
Query: 204 EDDDEVSE------------------------EEEEFGLDEEDEDEDEDEEEEEGGKGEK 239
E+DD E E+E+ D+EDED+D+DE++E+ +
Sbjct: 202 EEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDD 261
Query: 240 RKRETDDEGE 249
+ E ++E E
Sbjct: 262 EEEEEEEEEE 271
Score = 70.9 bits (172), Expect = 1e-12
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 36/126 (28%)
Query: 159 DAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEED---------DEDEDVEGDEDDDEV 209
+A+ + DEEE+D+ EDEED++DED +E+E + EDED E DEDD++
Sbjct: 139 NAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDD 198
Query: 210 SEEEEEFGLDE------------------------EDEDEDEDEEEEEGGKGEKRKRETD 245
++EE+ +E EDEDE+ED+E+E+ E + D
Sbjct: 199 DDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDED---DED 255
Query: 246 DEGEDD 251
D+ EDD
Sbjct: 256 DDDEDD 261
Score = 61.6 bits (148), Expect = 6e-10
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 22/110 (20%)
Query: 164 GVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDED------------VEGDEDDDEVSE 211
G + ++ + +E+EDD+ E+EE DE++DEDED ED+D+ +
Sbjct: 133 GAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDD 192
Query: 212 EEEEFGLDEEDEDEDEDEEEEEGGKGEKRKR----------ETDDEGEDD 251
E++E D+E++D +E+ E KG+K + E +DE EDD
Sbjct: 193 EDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDD 242
Score = 60.8 bits (146), Expect = 1e-09
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 25/114 (21%)
Query: 157 DSDAEVDGVDEEEEDEEGEDEEDE------------------------DDEDGEEEEFDE 192
D D E D DE+++D+E +D E+E +DED EE++ DE
Sbjct: 186 DEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDE 245
Query: 193 EDDEDEDVEGDED-DDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETD 245
+DD+DED E D+D DDE EEEEE +E + + E ++ E +K++ +
Sbjct: 246 DDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVE 299
Score = 59.7 bits (143), Expect = 2e-09
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 15/111 (13%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDE--------------EDEDDEDGEEEEFD 191
D D ED E D D E D +E E + + EDED+E+ +E+E D
Sbjct: 188 DDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDE-D 246
Query: 192 EEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKR 242
++DDED++ + DEDD+E EEEEE + E ++ +++ K+++
Sbjct: 247 DDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQK 297
Score = 33.5 bits (75), Expect = 0.18
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEED--EEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGD 203
D + ED E D D + D D+++ED EE E+EE+E ++ + E + E
Sbjct: 235 DEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAK 294
Query: 204 EDDDEVSEEEEEFGL 218
+ E +E F L
Sbjct: 295 KQKVEGTEPTTAFNL 309
Score = 30.0 bits (66), Expect = 2.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 192 EEDDEDEDVEGDEDDDEVSEE 212
EED EDE++ DE+DD EE
Sbjct: 25 EEDSEDEEMSEDEEDDSSGEE 45
Score = 28.5 bits (62), Expect = 5.8
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query: 165 VDEEEEDEEGEDEEDEDDEDGEE 187
V+E+ EDEE E++EDD GEE
Sbjct: 24 VEEDSEDEE-MSEDEEDDSSGEE 45
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 77.4 bits (189), Expect = 1e-14
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 131 YRESVFKLLPQLTYLDGYD-REDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEE 189
Y+E + +T L G + + + S +E + DEE+ED+E EDEE+EDDE+G+
Sbjct: 608 YKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGD--- 664
Query: 190 FDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
ED D ED+ E +E EE D+EDED+DED++E+E + E + G+
Sbjct: 665 -SSEDGGDSSESSSEDESEDGDENEE---DDEDEDDDEDDDEDEDNESEGSSSSSSSSGD 720
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 77.4 bits (189), Expect = 1e-14
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 131 YRESVFKLLPQLTYLDGYD-REDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEE 189
Y+E + +T L G + + + S +E + DEE+ED+E EDEE+EDDE+G+
Sbjct: 608 YKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGD--- 664
Query: 190 FDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
ED D ED+ E +E EE D+EDED+DED++E+E + E + G+
Sbjct: 665 -SSEDGGDSSESSSEDESEDGDENEE---DDEDEDDDEDDDEDEDNESEGSSSSSSSSGD 720
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 77.4 bits (189), Expect = 1e-14
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 131 YRESVFKLLPQLTYLDGYD-REDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEE 189
Y+E + +T L G + + + S +E + DEE+ED+E EDEE+EDDE+G+
Sbjct: 645 YKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGD--- 701
Query: 190 FDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
ED D ED+ E +E EE D+EDED+DED++E+E + E + G+
Sbjct: 702 -SSEDGGDSSESSSEDESEDGDENEE---DDEDEDDDEDDDEDEDNESEGSSSSSSSSGD 757
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 77.0 bits (188), Expect = 1e-14
Identities = 42/107 (39%), Positives = 67/107 (62%), Gaps = 11/107 (10%)
Query: 154 EAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEE 213
E DSD D +DE+EEDE GE+ +++DE G+E+E DEE D +E+ E +E+D++ E+
Sbjct: 89 ECDDSDGTED-MDEKEEDE-GEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDG 146
Query: 214 EEFGLDEEDEDEDEDEEEEEGGKGEK---------RKRETDDEGEDD 251
E+ +EE+E+E+E+EEEEE + + + E DD D+
Sbjct: 147 EDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDE 193
Score = 69.3 bits (168), Expect = 3e-12
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 149 DREDQE-APDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDD- 206
D++ QE AP D DE +D + +D D +EE+ EE ED D GDED+
Sbjct: 65 DKQPQEPAPKRKPFAVKADSSSVDE-CDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEE 123
Query: 207 DEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
DE + EEE ++EEDED+DED E+ E + E+ + E ++E E++
Sbjct: 124 DEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEEN 168
Score = 68.9 bits (167), Expect = 4e-12
Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 160 AEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLD 219
A+ VDE ++ + ED +++++++GEE D ++ DED E +E D EEEEE +
Sbjct: 82 ADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGD---REEEEEIEEE 138
Query: 220 EEDEDED-EDEEEEEGGKGEKRKRETDDEGED 250
+ED+DED ED E+EE + E+ + E ++E ED
Sbjct: 139 DEDDDEDGEDVEDEEEEEEEEEEEEEEEENED 170
Score = 58.2 bits (139), Expect = 7e-09
Identities = 29/83 (34%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
D ED+E + E ++E++DE+GED EDE++E+ EEEE +EE++E+ED + + +
Sbjct: 121 DEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEE-EEEEEENEDHQMNCHNTR 179
Query: 209 VSEEEEEFGLDEEDEDEDEDEEE 231
+ ++ E+ D+ + DE ++ +E
Sbjct: 180 IMQDTEK---DDNNNDEYDNYDE 199
Score = 39.3 bits (90), Expect = 0.003
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 18/115 (15%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDE----------DDEDGEEEEFDEEDDEDEDV 200
+D++ D + E + +EEEE+EE E+ ED D + ++ DE D+ DE V
Sbjct: 142 DDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDELV 201
Query: 201 EGD--------EDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDE 247
ED + E E + + ED+ ++ E G+ + + D +
Sbjct: 202 AKSLLNLGKIAEDAAYRARTESEMNSNTSNSLEDDSDKNENLGRKSELSLDLDSD 256
Score = 36.6 bits (83), Expect = 0.021
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205
D D ED E + + E + +EEEE+EE ++ + + + E+DD + D E D
Sbjct: 139 DEDDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNND-EYDNY 197
Query: 206 DDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGED 250
D+ V++ G ED E E + D+ E+
Sbjct: 198 DELVAKSLLNLGKIAEDAAYRARTESEMNSNTSNSLEDDSDKNEN 242
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 74.3 bits (181), Expect = 9e-14
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 27/132 (20%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205
+G + E++E + + E +G +EEEE EE E+E E +E GEEEE +EE D D D E +ED
Sbjct: 404 EGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEED 463
Query: 206 DDEVSE--EEEE--------------FGLDEE-----------DEDEDEDEEEEEGGKGE 238
++ SE E E+ +G EE ED D D EEE+ + +
Sbjct: 464 EESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSDSEEEDDEEED 523
Query: 239 KRKRETDDEGED 250
+ DD+ ED
Sbjct: 524 DEDEDDDDDEED 535
Score = 48.1 bits (113), Expect = 7e-06
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 38/102 (37%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDE--EDED---------------------- 181
+G + ++E + + +VD +EEEEDEE E E ED
Sbjct: 438 EGEELGEEEEVEEEGDVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQ 497
Query: 182 -------------DEDGEEEEFDEEDDEDEDVEGDEDD-DEV 209
D D EEE+ +EEDDEDED + DE+D DEV
Sbjct: 498 CPTLHFLEGGEDSDSDSEEEDDEEEDDEDEDDDDDEEDGDEV 539
Score = 39.7 bits (91), Expect = 0.003
Identities = 17/39 (43%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 162 VDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDV 200
++G ++ + D E ED+E+EDDED E+++ DEED ++ V
Sbjct: 504 LEGGEDSDSDSEEEDDEEEDDED-EDDDDDEEDGDEVPV 541
Score = 35.4 bits (80), Expect = 0.047
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 140 PQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDE 192
P L +L+G E DSD+E + +EE++++E +D+++ED ++ F E
Sbjct: 499 PTLHFLEG-----GEDSDSDSEEEDDEEEDDEDEDDDDDEEDGDEVPVPSFGE 546
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 70.9 bits (172), Expect = 1e-12
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 152 DQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSE 211
D E S + + + E +EEG +E+ E+DE+ EE D E+DE+ D +G+E+++E E
Sbjct: 182 DHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE---DAEEDEEVDEDGEEEEEEEEE 238
Query: 212 EEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
EEEE +EE+ ++DE +++EEG + R +D E
Sbjct: 239 EEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSE 276
Score = 68.9 bits (167), Expect = 4e-12
Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 9/95 (9%)
Query: 159 DAEVDGVDEEEEDEEGEDEED---EDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEE 215
++E G D E DE+ E++E+G EE+ +E+++ +ED E DE+ DE EEEEE
Sbjct: 175 NSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEE 234
Query: 216 FGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGED 250
EE+E+E+E+EEEEE + E+ +R+ +EG D
Sbjct: 235 ----EEEEEEEEEEEEEE--EYEQDERDQKEEGND 263
Score = 61.6 bits (148), Expect = 6e-10
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query: 152 DQEAPDSDAEVDGVDEE-EEDEEGEDEEDED---DEDGEEEEFD--EEDDEDEDVEGDED 205
D++ +++ E +GV+E+ EEDEE E++ +ED DEDGEEEE + EE++E+E+ E + +
Sbjct: 192 DEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYE 251
Query: 206 DDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGED 250
DE ++EE D E D E G R D ++
Sbjct: 252 QDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDE 296
Score = 57.8 bits (138), Expect = 9e-09
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDE-DVEGDE 204
DG +R E D + ++E +E D E G DE+ + E + EG E
Sbjct: 150 DGSERIGLEV---DRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVE 206
Query: 205 DDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
+D E EE EE ++E+ DED +EEEEE + E+ + E ++E E D
Sbjct: 207 EDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQD 253
Score = 52.4 bits (124), Expect = 4e-07
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVE------- 201
D E +E + D EVD D EEE+EE E+EE+E++E+ EE E DE D ++E +
Sbjct: 212 DEEVEEDAEEDEEVDE-DGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEA 270
Query: 202 GDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKG 237
D + VS + + DE ++E + +G
Sbjct: 271 SDSGSESVSFTDGSVRSGSGTDGSDEKKKERKRARG 306
Score = 50.8 bits (120), Expect = 1e-06
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
D E+ E + DAE D +E +ED E E+EE+E++E+ EEEE +E + ++ D + + +D +
Sbjct: 208 DVEEDEEVEEDAEED--EEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYD 265
Query: 209 VSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRE 243
E + G E D G G K++
Sbjct: 266 TRSEASDSG-SESVSFTDGSVRSGSGTDGSDEKKK 299
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 70.9 bits (172), Expect = 1e-12
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 152 DQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSE 211
D E S + + + E +EEG +E+ E+DE+ EE D E+DE+ D +G+E+++E E
Sbjct: 182 DHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE---DAEEDEEVDEDGEEEEEEEEE 238
Query: 212 EEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
EEEE +EE+ ++DE +++EEG + R +D E
Sbjct: 239 EEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSE 276
Score = 68.9 bits (167), Expect = 4e-12
Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 9/95 (9%)
Query: 159 DAEVDGVDEEEEDEEGEDEED---EDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEE 215
++E G D E DE+ E++E+G EE+ +E+++ +ED E DE+ DE EEEEE
Sbjct: 175 NSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEE 234
Query: 216 FGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGED 250
EE+E+E+E+EEEEE + E+ +R+ +EG D
Sbjct: 235 ----EEEEEEEEEEEEEE--EYEQDERDQKEEGND 263
Score = 61.6 bits (148), Expect = 6e-10
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query: 152 DQEAPDSDAEVDGVDEE-EEDEEGEDEEDED---DEDGEEEEFD--EEDDEDEDVEGDED 205
D++ +++ E +GV+E+ EEDEE E++ +ED DEDGEEEE + EE++E+E+ E + +
Sbjct: 192 DEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYE 251
Query: 206 DDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGED 250
DE ++EE D E D E G R D ++
Sbjct: 252 QDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDE 296
Score = 57.8 bits (138), Expect = 9e-09
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDE-DVEGDE 204
DG +R E D + ++E +E D E G DE+ + E + EG E
Sbjct: 150 DGSERIGLEV---DRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVE 206
Query: 205 DDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
+D E EE EE ++E+ DED +EEEEE + E+ + E ++E E D
Sbjct: 207 EDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQD 253
Score = 52.4 bits (124), Expect = 4e-07
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVE------- 201
D E +E + D EVD D EEE+EE E+EE+E++E+ EE E DE D ++E +
Sbjct: 212 DEEVEEDAEEDEEVDE-DGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEA 270
Query: 202 GDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKG 237
D + VS + + DE ++E + +G
Sbjct: 271 SDSGSESVSFTDGSVRSGSGTDGSDEKKKERKRARG 306
Score = 50.8 bits (120), Expect = 1e-06
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
D E+ E + DAE D +E +ED E E+EE+E++E+ EEEE +E + ++ D + + +D +
Sbjct: 208 DVEEDEEVEEDAEED--EEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYD 265
Query: 209 VSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRE 243
E + G E D G G K++
Sbjct: 266 TRSEASDSG-SESVSFTDGSVRSGSGTDGSDEKKK 299
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 68.2 bits (165), Expect = 7e-12
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVS 210
ED + +S + + EEEDEE E+EE+E++ED EEEE +EE++E+E+ E +E+++E
Sbjct: 241 EDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEE 300
Query: 211 EEEEE 215
EEEEE
Sbjct: 301 EEEEE 305
Score = 67.4 bits (163), Expect = 1e-11
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 163 DGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEED 222
D EE ++G +E+DE+ EEEE +EE+DE+E+ E +E+++E EEEEE EE+
Sbjct: 242 DAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEE----EEE 297
Query: 223 EDEDEDEEE 231
E+E+E+EEE
Sbjct: 298 EEEEEEEEE 306
Score = 62.4 bits (150), Expect = 4e-10
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 16/116 (13%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
D +E+ + +E+EE+EE E+EE+ED+E+ EEEE +EE++E+E+ E +E+++E
Sbjct: 242 DAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 301
Query: 209 VSEEEEEFGLD---EEDEDEDEDEEEEE--GGKGEKRK---------RETDDEGED 250
EEEEE D +ED ++ E G + K R DD+ ED
Sbjct: 302 --EEEEEAAPDVIFQEDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDED 355
Score = 60.8 bits (146), Expect = 1e-09
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 157 DSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEE----FDEEDDEDEDVEGDEDDDEVSEE 212
D++ V+ E +D + ED E+ +++ +EED+E+E+ E +E++DE EE
Sbjct: 220 DAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEE 279
Query: 213 EEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDD 246
EEE +EE+E+E+E+EEEEE + E+ + D
Sbjct: 280 EEE---EEEEEEEEEEEEEEEEEEEEEEEEAAPD 310
Score = 58.5 bits (140), Expect = 5e-09
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 22/118 (18%)
Query: 148 YDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDED--EDVEGDED 205
++ ED+E + + E + +EEEE+EE E+EE+E++E+ EEEE +EE++E+ DV ED
Sbjct: 257 HEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQED 316
Query: 206 DDEVSEEE--------------EEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
S ++ E + E D+D+DE+ RK DE E
Sbjct: 317 TSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDT------HSRKSTVTDESE 368
Score = 56.6 bits (135), Expect = 2e-08
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 153 QEAPDSDAEVDGV-------DEEEEDEEGEDEEDED--DEDGEEEEFDEEDDEDEDVEGD 203
QEA + A +G ++ EE E E +D + E+ +E + + +
Sbjct: 199 QEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHE 258
Query: 204 EDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
E+D+E EEEEE DEE+E+E+E+EEEEE + E+ + E ++E E++
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 306
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 67.4 bits (163), Expect = 1e-11
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 23/111 (20%)
Query: 151 EDQEAPDSDAEVDGVD---------EEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVE 201
+D EA SD E + V+ E E+EE E+EE+E+DE+ EEEE EE+ E E E
Sbjct: 504 DDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEE--EEEGESEGSE 561
Query: 202 GDEDDDEVSEEEE-----------EFGLDEE-DEDEDEDEEEEEGGKGEKR 240
GDE+D++VS+E++ E D E D D+D +EE K ++R
Sbjct: 562 GDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKEERAYDKAKRR 612
Score = 66.6 bits (161), Expect = 2e-11
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 164 GVDEEEEDE---EGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDE 220
GV E+EE E E+EED +D ++ E D+E E VEG++ EV E EE +E
Sbjct: 479 GVPEKEETPPPVEPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEE 538
Query: 221 EDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
E+E+EDE+ EEEE +GE E D+E E
Sbjct: 539 EEEEEDEESEEEEEEEGESEGSEGDEEDE 567
Score = 57.8 bits (138), Expect = 9e-09
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
+ + ++A D E DEE E EG E E+ EEEE +EE++E+ED E +E+++E
Sbjct: 495 EEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEE-EEEEEEEEDEESEEEEEE 553
Query: 209 VSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
E E G +E+++ DE + + K ++ +D E + D
Sbjct: 554 EGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSD 596
Score = 54.7 bits (130), Expect = 8e-08
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 152 DQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSE 211
++E DA +D + DEE E E +E +EE++E+E+ E DE+ +E E
Sbjct: 493 EEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEE 552
Query: 212 EEEEFGLDEEDEDEDEDEEEEEGGK--GEKRKRETDDEGEDD 251
EE E E DE++++ +E++ GK +K +E + E D
Sbjct: 553 EEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYD 594
Score = 40.0 bits (92), Expect = 0.002
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
D E +E + + E +G + +EEDE+ DE+D G+ + + D E D DDD
Sbjct: 544 DEESEEEEEEEGESEGSEGDEEDEKVSDEKD----SGKTLDKKPSKEMSSDSEYDSDDDR 599
Query: 209 VSEE 212
EE
Sbjct: 600 TKEE 603
Score = 38.9 bits (89), Expect = 0.004
Identities = 23/106 (21%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 151 EDQEAPDSD-----AEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205
ED D D AE++G +E +E + + + ++ ++++FDE+D E E +
Sbjct: 10 EDSTKDDIDLDALAAEIEGAGAAKE-QEPQKSKGKKKKEKKKQDFDEDDILKELEELSLE 68
Query: 206 DDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
+ + E + + +E+E +++ KG+K K+++ D+ + +
Sbjct: 69 AQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSE 114
Score = 37.0 bits (84), Expect = 0.016
Identities = 18/85 (21%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 167 EEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDED 226
E E+E ++ + + G+++ FD+ D E+ + + D + ++ + E +D+D+
Sbjct: 85 ENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELE-DKDSKSKKTAKPKVEMYSGSDDDDDF 143
Query: 227 EDEEEEEGGKGEKRKRETDDEGEDD 251
++ GK +K ++ D ED+
Sbjct: 144 NKLPKKAKGKAQKSNKKWDGSEEDE 168
Score = 36.6 bits (83), Expect = 0.021
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 22/173 (12%)
Query: 99 KLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDS 158
K+K ++ + KK K D ++ L + E Q + + ++E S
Sbjct: 224 KIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKS 283
Query: 159 DAEVD-GVDEEEEDEEGEDEEDEDDEDGEEEEFDE-------EDDEDEDVEGDEDDDEVS 210
VD GV E++ EDD +G++++ D+ E+ E E +G +
Sbjct: 284 KVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKA 343
Query: 211 EEEEEFGLDEEDEDEDEDEE--------------EEEGGKGEKRKRETDDEGE 249
+E L EE+E + +EE EEE + EKR+R+ E E
Sbjct: 344 MQEALAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKE 396
Score = 36.2 bits (82), Expect = 0.028
Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
Query: 156 PDSDAEVDGVDEEEEDEEGEDEE-DEDDEDGEEEEFDEEDD------------------- 195
P S+ + + E+D EG+ ++ D+ + GE+EE ++E
Sbjct: 293 PASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLK 352
Query: 196 EDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
E+E+ + E+++ + EE +E+E ++++ E + K ++RK EG+
Sbjct: 353 EEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGK 406
Score = 35.8 bits (81), Expect = 0.036
Identities = 21/111 (18%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDED--------EDV 200
DRE ++ + +++ ++G+ + + +D + EE +++D + E
Sbjct: 75 DRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKKTAKPKVEMY 134
Query: 201 EGDEDDDEVSE--EEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
G +DDD+ ++ ++ + + ++ D EE+E+ K K + + GE
Sbjct: 135 SGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGE 185
Score = 35.0 bits (79), Expect = 0.062
Identities = 29/150 (19%), Positives = 66/150 (44%), Gaps = 20/150 (13%)
Query: 113 ECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDE 172
+ LK L+ + E + RE+V + P + + +D++ + D+ + +E
Sbjct: 57 DILKELEELSLEAQGIKADRETV-AVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEE 115
Query: 173 -EGEDEEDEDDEDGEEEEFDEEDDEDE-----------------DVEGDEDDDEVSEE-E 213
E +D + + + E + DD+D+ +G E+D++ S++ +
Sbjct: 116 LEDKDSKSKKTAKPKVEMYSGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKKIK 175
Query: 214 EEFGLDEEDEDEDEDEEEEEGGKGEKRKRE 243
E ++ E DE +E + KG+K+ ++
Sbjct: 176 ERSRINSSGESGDESDEFLQSRKGQKKNQK 205
Score = 34.3 bits (77), Expect = 0.11
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVS 210
E A + D E D ++++ ++GE EE E ++ + + ++ + E+++
Sbjct: 300 ETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQK 359
Query: 211 -EEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
EEEE EE E + ++EE E K E++K++ + E
Sbjct: 360 REEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKE 399
Score = 33.5 bits (75), Expect = 0.18
Identities = 31/151 (20%), Positives = 66/151 (43%), Gaps = 39/151 (25%)
Query: 140 PQLTYLDGYDREDQ----------EAPDSDAEVDGVDEEEEDE-------------EGED 176
P++ G D +D +A S+ + DG +E+E++ E D
Sbjct: 129 PKVEMYSGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGD 188
Query: 177 EEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVS----------EEEEEFGLDEEDEDE- 225
E DE + + ++ ++++ ++E +DD+ S E++E + DE++
Sbjct: 189 ESDEFLQSRKGQKKNQKNKPGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKA 248
Query: 226 -----DEDEEEEEGGKGEKRKRETDDEGEDD 251
E EE E G K + +++E+ + E++
Sbjct: 249 KLRKLKEKEELETGKKDQSKQKESQRKFEEE 279
Score = 31.6 bits (70), Expect = 0.68
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 187 EEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDE-EDEDEDEDEEEEEGGKGEKRKRETD 245
E+ E+++ VE +E++D E+ GLD+ E DE+ E+ EG K +E
Sbjct: 477 EQGVPEKEETPPPVEPEEEEDT-----EDAGLDDWEAMASDEETEKVEGNKVHIEVKENP 531
Query: 246 DEGEDD 251
+E E++
Sbjct: 532 EEEEEE 537
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 66.2 bits (160), Expect = 3e-11
Identities = 29/105 (27%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
Query: 140 PQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDED 199
P + ++ + D + P S D ++EEED+E EDEED++D++ ++ + + + + + D
Sbjct: 583 PAKSLVEQFRGTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESD 642
Query: 200 VEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRET 244
EG E++ D++D+D+DE + + EG K + +T
Sbjct: 643 TEGSEEE------------DDDDKDQDESDSDTEGEKTSMKLNKT 675
Score = 54.3 bits (129), Expect = 1e-07
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 170 EDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDE 229
E G D + +D E+ DEE+D++E+ E D++DDE + + E D E + E
Sbjct: 589 EQFRGTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSE--SDSNSESDTEGS 646
Query: 230 EEEEGGKGEKRKRETDDEGE 249
EEE+ ++ + ++D EGE
Sbjct: 647 EEEDDDDKDQDESDSDTEGE 666
Score = 47.4 bits (111), Expect = 1e-05
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 185 GEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKR 242
G + ++D++DD+D D +GDEDD++ ++E++ G + D EDEDE ++ E K+
Sbjct: 1294 GGDSDYDDDDDDDSDDQGDEDDEDEEDKEDKKG-KKTDICEDEDEGDQAASVEELEKQ 1350
Score = 45.1 bits (105), Expect = 6e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 198 EDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
E G + D S++ E+ DEE++DE+EDEE++E + + + E+D E D
Sbjct: 589 EQFRGTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESD 642
Score = 42.7 bits (99), Expect = 3e-04
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 185 GEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRET 244
G + + D ++ E +E+DDE +EE+ DE+DE +D E + + + E
Sbjct: 593 GTDSDIPSSKDSEDSNEDEEEDDEEEDEED----DEDDESDDSQSESDSNSESDTEGSEE 648
Query: 245 DDEGEDD 251
+D+ + D
Sbjct: 649 EDDDDKD 655
Score = 42.4 bits (98), Expect = 4e-04
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
++E + DA VD + +++ ++ + D D D E + + DD
Sbjct: 213 NQEQSKNQPLDARVDKIKDKKPRKKAMESSSNSDSDSGTSS----DTSSEGISSSDSDDL 268
Query: 209 VSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKR 240
+EEEE EE ED+D D E E K +
Sbjct: 269 EEDEEEEDQSIEESEDDDSDSESEAQHKSNNQ 300
Score = 42.4 bits (98), Expect = 4e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 188 EEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDE 247
E+F D + + ED +E EE++E +E+DED++ D+ + E + E +E
Sbjct: 589 EQFRGTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEE 648
Query: 248 GEDD 251
+DD
Sbjct: 649 EDDD 652
Score = 40.4 bits (93), Expect = 0.001
Identities = 16/68 (23%), Positives = 35/68 (51%)
Query: 184 DGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRE 243
D + + +D +ED E D+++++ ++E++ D + E + E + EG + E +
Sbjct: 595 DSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDK 654
Query: 244 TDDEGEDD 251
DE + D
Sbjct: 655 DQDESDSD 662
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 157 DSDAEVDGVDEEEE--DEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEE 212
DSD + D D+ ++ DE+ EDEED++D+ G++ + E++DE + E+ ++ E+
Sbjct: 1296 DSDYDDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDICEDEDEGDQAASVEELEKQIEK 1353
Score = 40.0 bits (92), Expect = 0.002
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 167 EEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDED 226
++++D++ +D+ DEDDED E++E + D + DE D S EE E +++ + +
Sbjct: 1300 DDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDICEDEDEGDQAASVEELEKQIEKLSKQQS 1359
Query: 227 E 227
+
Sbjct: 1360 Q 1360
Score = 39.7 bits (91), Expect = 0.003
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 164 GVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDE 223
G D + +D++ +D +D+ DED +E+E D+ED + + + ED+DE + L+++ E
Sbjct: 1294 GGDSDYDDDDDDDSDDQGDED-DEDEEDKEDKKGKKTDICEDEDEGDQAASVEELEKQIE 1352
Query: 224 DEDEDEEE 231
+ + +
Sbjct: 1353 KLSKQQSQ 1360
Score = 39.3 bits (90), Expect = 0.003
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205
D R+ S+++ D + EG D DD + +EEE ED+ +E ED
Sbjct: 231 DKKPRKKAMESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEE------EDQSIEESED 284
Query: 206 DDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRE 243
DD SE E + + + + + +G K ++ +E
Sbjct: 285 DDSDSESEAQHKSNNQVLLHGISDPKADGQKATEKAQE 322
Score = 38.9 bits (89), Expect = 0.004
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 173 EGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEE 232
+G D + +DD+D + ++ +EDDEDE+ + D+ + E+E DE D+ +E E+
Sbjct: 1293 KGGDSDYDDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDICEDE---DEGDQAASVEELEK 1349
Query: 233 EGGKGEKRKRE 243
+ K K++ +
Sbjct: 1350 QIEKLSKQQSQ 1360
Score = 35.0 bits (79), Expect = 0.062
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGE--------DEEDEDDEDGEEEEFDEE 193
D +D + DSD + D DE+EED+E + ++EDE D+ EE +++
Sbjct: 1298 DYDDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDICEDEDEGDQAASVEELEKQ 1350
Score = 32.7 bits (73), Expect = 0.31
Identities = 16/70 (22%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 147 GYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDD 206
G D + + D D++ G +++E++E+ ED++ + + E+E DE D E ++
Sbjct: 1294 GGDSDYDDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDICEDE--DEGDQAASVEELEKQI 1351
Query: 207 DEVSEEEEEF 216
+++S+++ ++
Sbjct: 1352 EKLSKQQSQY 1361
Score = 32.0 bits (71), Expect = 0.52
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 13/54 (24%)
Query: 201 EGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETD---DEGEDD 251
+ D DDD+ D++ +D+ ++++E+E K +K+ ++TD DE E D
Sbjct: 1296 DSDYDDDD----------DDDSDDQGDEDDEDEEDKEDKKGKKTDICEDEDEGD 1339
Score = 31.6 bits (70), Expect = 0.68
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 198 EDVEGDEDDDEVSEEEEEFGLDEEDEDE-DEDEEEEEGGKGEKRKRETDDEGE 249
E + D S + G+ D D+ +EDEEEE+ E ++D E E
Sbjct: 240 ESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEEDQSIEESEDDDSDSESE 292
Score = 28.1 bits (61), Expect = 7.6
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 189 EFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEG 248
E D D D + +S D +D +EDE+EE++ + E +++ E
Sbjct: 240 ESSSNSDSDSGTSSDTSSEGISSS------DSDDLEEDEEEEDQSIEESEDDDSDSESEA 293
Query: 249 E 249
+
Sbjct: 294 Q 294
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 65.5 bits (158), Expect = 4e-11
Identities = 32/92 (34%), Positives = 55/92 (59%)
Query: 160 AEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLD 219
A+ +G +EE + + E E + + E GEE E +EE + +E+ E +E+ ++ S+EE E +
Sbjct: 71 ADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSE 130
Query: 220 EEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
EE EDE E E EE+ + + + E + E E +
Sbjct: 131 EEMEDEQESEAEEDNQEEGESEAEGETEAESE 162
Score = 61.2 bits (147), Expect = 8e-10
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 151 EDQEAPDSDAEVDGVDEEE-EDEEGEDEEDEDDEDGEEE-EFDEEDDEDEDVEGDEDDDE 208
+ + A +AEV E E E E GE+ E E++ + EEE E +EE +++ D E +ED +E
Sbjct: 72 DGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEE 131
Query: 209 VSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
E+E+E +E++++E E E E E + E + E E
Sbjct: 132 EMEDEQESEAEEDNQEEGESEAEGETEAESEFDPEIEMEAE 172
Score = 58.5 bits (140), Expect = 5e-09
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 156 PDSDAEVDGVDEEE---EDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEE 212
P +D E G +E E E E + E ++ + EEE EE+ E E+ E +++ DE SEE
Sbjct: 69 PPADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEE-ESEDESDEESEE 127
Query: 213 EEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
+ E +++E E E E++ +EEG + + ET+ E E D
Sbjct: 128 DSEEEMEDEQESEAEEDNQEEG--ESEAEGETEAESEFD 164
Score = 58.5 bits (140), Expect = 5e-09
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
++E + ++ E + +E E +EE E EE+ +DE EE E D E++ +++ E + ++D
Sbjct: 86 EQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDN 145
Query: 209 VSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRK 241
E E E + E E E + E E E + KRK
Sbjct: 146 QEEGESEAEGETEAESEFDPEIEMEAERVAKRK 178
Score = 57.8 bits (138), Expect = 9e-09
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVS 210
E + +S+A + EEE + E E E +E+ ED +EE +E+ +E+ + E + + +E +
Sbjct: 86 EQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDN 145
Query: 211 EEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGED 250
+EE E + E E E E + E E KR+ D G D
Sbjct: 146 QEEGESEAEGETEAESEFDPEIEMEAERVAKRKCPDHGLD 185
Score = 54.3 bits (129), Expect = 1e-07
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 146 DGYDREDQEAP-DSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDE-DEDVEGD 203
+G +E+ E + + E++ EE + E E E +E+ E EE E DE D+E +ED E +
Sbjct: 74 EGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESE-DESDEESEEDSEEE 132
Query: 204 EDDDEVSEEEEEFGLDEEDEDEDEDEEEEE 233
+D++ SE EE+ + E E E E E E E
Sbjct: 133 MEDEQESEAEEDNQEEGESEAEGETEAESE 162
Score = 50.4 bits (119), Expect = 1e-06
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 147 GYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDD 206
G + E +E +S+ E + +E E++ + E EED ++E +E+E + E+D E EG+ +
Sbjct: 96 GEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQE--EGESEA 153
Query: 207 DEVSEEEEEFGLDEEDEDE 225
+ +E E EF + E E E
Sbjct: 154 EGETEAESEFDPEIEMEAE 172
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 65.1 bits (157), Expect = 6e-11
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 25/128 (19%)
Query: 149 DREDQ---------EAPDSDAEVDGVDEEEEDEEGEDEEDEDD-----------EDGEEE 188
D EDQ E D E DG +++ +E+GED ++++D EDG+E+
Sbjct: 133 DEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEK 192
Query: 189 EFDEEDDED--EDVEGDEDDDEVSEEEEEFGLD---EEDEDEDEDEEEEEGGKGEKRKRE 243
DE+++ED E +G E++D + +++ G D +EDE E ED +E+EGG E+ +E
Sbjct: 193 GEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKE 252
Query: 244 TDDEGEDD 251
+D E++
Sbjct: 253 KEDLKEEE 260
Score = 60.1 bits (144), Expect = 2e-09
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEE---------EFDEEDDE 196
DG ED + D + G DE+EE++ E + +++EDG+E+ + E++ E
Sbjct: 175 DGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKE 234
Query: 197 DEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEK 239
ED + DE +E +E+ L EE+E ++EDE +E+ GK E+
Sbjct: 235 REDGKEDEGGNEEEAGKEKEDLKEEEEGKEEDEIKEDDGKKEE 277
Score = 57.0 bits (136), Expect = 2e-08
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 19/120 (15%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGE--EEEFDEEDDED--EDVEGDE 204
D ++ +A V EEED++ EDEED+++E GE +E+ DE+ +ED ED G+E
Sbjct: 107 DATEKGGEKKEAVAAEVKNEEEDQK-EDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNE 165
Query: 205 DDDEVSEEEE-----------EFGLDE-EDEDEDEDEEEEEGGKGEKRKRETDD--EGED 250
++ E+E+ E G ++ EDE E+ED +E GK + +E D EG+D
Sbjct: 166 KGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKD 225
Score = 54.7 bits (130), Expect = 8e-08
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 154 EAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEE 213
EAP S+ E+ V EE + ED ++ GE++E + ++E+ + ED+++ +EE+
Sbjct: 89 EAPASEKEIVEVKEE-------NIEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEK 141
Query: 214 EEFGLDEEDEDEDEDEEEEEGG--KGEKRKRETD-DEGED 250
E G +++DE +ED +E++ G KGE K + D +GED
Sbjct: 142 GEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGED 181
Score = 52.4 bits (124), Expect = 4e-07
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 150 REDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEE------------EFDEEDDED 197
+ D + D V E +++ E++ +E+ ++GE + E EE+ ED
Sbjct: 48 KSDMMEENIDTSAQAVAETKQEAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIED 107
Query: 198 EDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
+G E + V+ E + E+ED+ EDEE++ KGE K + D++GE+D
Sbjct: 108 ATEKGGEKKEAVAAE-----VKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEED 156
Score = 51.6 bits (122), Expect = 6e-07
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 147 GYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDE---DGEEEEFDEE---DDEDEDV 200
G D +++E + G E+ +++ +++E+ED + DG+E E +E E +DV
Sbjct: 167 GEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDV 226
Query: 201 EGDEDDDEVSE-EEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGED 250
+ ED+ E + +E+E G +EE E ED +EEE GK E +E D + E+
Sbjct: 227 KVKEDEKEREDGKEDEGGNEEEAGKEKEDLKEEEEGKEEDEIKEDDGKKEE 277
Score = 38.5 bits (88), Expect = 0.006
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 146 DGYDREDQEAPDSDAEVDGV----DEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVE 201
DG + ED + E V DE+E ++ EDE ++E G+E+E +E++E ++ +
Sbjct: 207 DGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKEDLKEEEEGKEED 266
Query: 202 GDEDDDEVSEEEE 214
++DD EE +
Sbjct: 267 EIKEDDGKKEEPQ 279
Score = 33.1 bits (74), Expect = 0.24
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 14/75 (18%)
Query: 147 GYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDG-------------EEEEFDEE 193
G +E+++ + + +G D + +++E E E+ ++DE G EEEE EE
Sbjct: 206 GDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKEDLKEEEEGKEE 265
Query: 194 DDEDEDVEGDEDDDE 208
D+ ED +G +++ +
Sbjct: 266 DEIKED-DGKKEEPQ 279
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 65.1 bits (157), Expect = 6e-11
Identities = 26/75 (34%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Query: 168 EEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDE 227
+++D + DEE D+++G E +E +D++ + +G+++DDE ++++ D++D+D+DE
Sbjct: 223 KQKDIQRTDEETTDNQEGSVESSEEGEDQEHEDDGEDEDDEDDDDDD----DDDDDDDDE 278
Query: 228 DEEEEEGGKGEKRKR 242
D+E+EE G+ E +KR
Sbjct: 279 DDEDEEDGEEENQKR 293
Score = 64.3 bits (155), Expect = 1e-10
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 16/118 (13%)
Query: 99 KLKDISTLEPLKKLECLKSLDLFN-CEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 157
K+ D+ + + E L+ L +FN E +NLN Y K + R D+E D
Sbjct: 187 KMDDMKKMRRQRMRE-LEDLGVFNETEESNLNMYTRGKQKDI---------QRTDEETTD 236
Query: 158 SDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEE 215
+ E EEGED+E EDD + E++E D++DD+D+D + DEDD++ + EEE
Sbjct: 237 NQE-----GSVESSEEGEDQEHEDDGEDEDDEDDDDDDDDDDDDDDEDDEDEEDGEEE 289
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 64.3 bits (155), Expect = 1e-10
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 25/128 (19%)
Query: 146 DGYDREDQE-APDSDAEVDGVDEE-------EEDEEGEDEEDEDDEDGEEEEFDEEDDED 197
DG +RE +E + D + +G ++E +E EE + E E ++DG E+ DEE E
Sbjct: 559 DGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDSENSEFEDDGSEKVLDEEGSER 618
Query: 198 EDVEGDEDDDEVSEEEEEFGL---DEEDEDEDE-----------DEEEEEGGKGEKRKRE 243
E DED DE EEE+ + DE DE EDE D++ EEG EK E
Sbjct: 619 EF---DEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAADKKAEEGDADEKLFEE 675
Query: 244 TDDEGEDD 251
+DD+ ++D
Sbjct: 676 SDDKEDED 683
Score = 62.4 bits (150), Expect = 4e-10
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 13/112 (11%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEE------FDEEDDEDEDVE-GD 203
E+ ++ +S+ E DG ++ ++E E E DED ++ EEEE FD+E DE ED E D
Sbjct: 593 EENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYAD 652
Query: 204 EDDDEVSEEEEEFG------LDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
E E ++++ E G +E D+ EDED + +E +++ E DD E
Sbjct: 653 EKGLEAADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNE 704
Score = 60.8 bits (146), Expect = 1e-09
Identities = 50/130 (38%), Positives = 65/130 (50%), Gaps = 28/130 (21%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDED-----DEDGEEEEFDE---EDDEDE-- 198
+ ED +S+ EV G +E E+++ E E DED EDG E EF+E E D DE
Sbjct: 520 ESEDDLNKESEEEV-GPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEG 578
Query: 199 ----------DVEGDEDDDEVSEEEEEFG---LDEEDE----DEDEDEEEEEGGKGEKRK 241
D E +E+D E SE E++ LDEE DED DE+EEE EK
Sbjct: 579 SEKELHENVLDKELEENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVF 638
Query: 242 RETDDEGEDD 251
+ DE ED+
Sbjct: 639 DDESDEKEDE 648
Score = 55.8 bits (133), Expect = 3e-08
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 158 SDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFG 217
+D E +G+ +E ED+ ++ E+E E EE D E + DED + +D E EE G
Sbjct: 510 NDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENG 569
Query: 218 LDEEDEDEDEDEEEEEGGKGEKRKRETDDEG---EDD 251
L E+D DE+ E+E +K E D E EDD
Sbjct: 570 L-EKDLDEEGSEKELHENVLDKELEENDSENSEFEDD 605
Score = 53.5 bits (127), Expect = 2e-07
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDED--DEDGEE--EEFDEEDDEDEDV- 200
+G +RE E D E + E+ D+E +++EDE+ DE G E ++ EE D DE +
Sbjct: 614 EGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAADKKAEEGDADEKLF 673
Query: 201 -EGDEDDDEVSEEEEEFGLDE---EDEDEDEDEEEEEGGKGEKRKRETDDEG 248
E D+ +DE ++ +E DE ED+D +E +EE EK ++D+ G
Sbjct: 674 EESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKLFDDSDERG 725
Score = 47.8 bits (112), Expect = 9e-06
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 20/100 (20%)
Query: 147 GYDREDQEAPDSDAEV----DGVDEEEEDEEGEDEEDED-----DEDGEEEEFDEEDDED 197
G + D++A + DA+ + D+E+ED +G++ ED D D+D E+ FDEE+D
Sbjct: 655 GLEAADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSS 714
Query: 198 EDVEGDEDDDEV-----SEEE------EEFGLDEEDEDED 226
E + D D+ S EE F L +D+D+D
Sbjct: 715 EKLFDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDD 754
Score = 45.8 bits (107), Expect = 4e-05
Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
++ED+E D ++ D++ E+ + +++ E+ +D E+E+ D ++ ED D + EDDD
Sbjct: 644 EKEDEEYADEKG-LEAADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDD- 701
Query: 209 VSEEEEEFGLDEEDEDEDEDEEEEEGGKG 237
E+ F +E+ ++ D+ +E G G
Sbjct: 702 --SNEKLFDEEEDSSEKLFDDSDERGTLG 728
Score = 42.7 bits (99), Expect = 3e-04
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 140 PQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGE----DEEDEDDEDGEEEEFDEEDD 195
P+ +G ++ E +G ++E EEG EED ++ +++ + D
Sbjct: 454 PEKEAEEGCPEKESEEGCPKRGFEGSCSQKESEEGNPVRGSEEDSPKKESKKKTL-KNDC 512
Query: 196 EDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
E+ + + +DD E EEE G +E E++D ++E +E ++ + ++ E E++
Sbjct: 513 EENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEEN 568
Score = 40.0 bits (92), Expect = 0.002
Identities = 35/115 (30%), Positives = 47/115 (40%), Gaps = 27/115 (23%)
Query: 163 DGVDEEEEDEEGEDEEDEDDEDGE----EEEFDE--------------EDDEDEDVEGDE 204
DG + EE E +E +++ E E+E +E E +E V G E
Sbjct: 436 DGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFEGSCSQKESEEGNPVRGSE 495
Query: 205 DDDEVSEEE--------EEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
+D E + EE GL +E ED+ E EEE G K E D E E D
Sbjct: 496 EDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGP-TKESEEDDSEKESD 549
Score = 37.7 bits (86), Expect = 0.010
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 168 EEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDED--- 224
EE+ + E ++ D EE +E ++D + E +E+ E EE+ E DED
Sbjct: 495 EEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSE 554
Query: 225 ---EDEDEEE-EEGGKGEKRKRETDDEGED 250
ED E E EE G +++ D+EG +
Sbjct: 555 KQSEDGSEREFEENG----LEKDLDEEGSE 580
Score = 28.5 bits (62), Expect = 5.8
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 182 DEDGEEEEFDEEDDEDEDVEGDEDD---DEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGE 238
+E +E++F++ +D E EG ++ + E+E E G E++ +E + EG +
Sbjct: 423 EEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFEGSCSQ 482
Query: 239 KRKRE 243
K E
Sbjct: 483 KESEE 487
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 64.3 bits (155), Expect = 1e-10
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 25/128 (19%)
Query: 146 DGYDREDQE-APDSDAEVDGVDEE-------EEDEEGEDEEDEDDEDGEEEEFDEEDDED 197
DG +RE +E + D + +G ++E +E EE + E E ++DG E+ DEE E
Sbjct: 559 DGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDSENSEFEDDGSEKVLDEEGSER 618
Query: 198 EDVEGDEDDDEVSEEEEEFGL---DEEDEDEDE-----------DEEEEEGGKGEKRKRE 243
E DED DE EEE+ + DE DE EDE D++ EEG EK E
Sbjct: 619 EF---DEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAADKKAEEGDADEKLFEE 675
Query: 244 TDDEGEDD 251
+DD+ ++D
Sbjct: 676 SDDKEDED 683
Score = 62.4 bits (150), Expect = 4e-10
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 13/112 (11%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEE------FDEEDDEDEDVE-GD 203
E+ ++ +S+ E DG ++ ++E E E DED ++ EEEE FD+E DE ED E D
Sbjct: 593 EENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYAD 652
Query: 204 EDDDEVSEEEEEFG------LDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249
E E ++++ E G +E D+ EDED + +E +++ E DD E
Sbjct: 653 EKGLEAADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNE 704
Score = 60.8 bits (146), Expect = 1e-09
Identities = 50/130 (38%), Positives = 65/130 (50%), Gaps = 28/130 (21%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDED-----DEDGEEEEFDE---EDDEDE-- 198
+ ED +S+ EV G +E E+++ E E DED EDG E EF+E E D DE
Sbjct: 520 ESEDDLNKESEEEV-GPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEG 578
Query: 199 ----------DVEGDEDDDEVSEEEEEFG---LDEEDE----DEDEDEEEEEGGKGEKRK 241
D E +E+D E SE E++ LDEE DED DE+EEE EK
Sbjct: 579 SEKELHENVLDKELEENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVF 638
Query: 242 RETDDEGEDD 251
+ DE ED+
Sbjct: 639 DDESDEKEDE 648
Score = 55.8 bits (133), Expect = 3e-08
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 158 SDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFG 217
+D E +G+ +E ED+ ++ E+E E EE D E + DED + +D E EE G
Sbjct: 510 NDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENG 569
Query: 218 LDEEDEDEDEDEEEEEGGKGEKRKRETDDEG---EDD 251
L E+D DE+ E+E +K E D E EDD
Sbjct: 570 L-EKDLDEEGSEKELHENVLDKELEENDSENSEFEDD 605
Score = 53.5 bits (127), Expect = 2e-07
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDED--DEDGEE--EEFDEEDDEDEDV- 200
+G +RE E D E + E+ D+E +++EDE+ DE G E ++ EE D DE +
Sbjct: 614 EGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAADKKAEEGDADEKLF 673
Query: 201 -EGDEDDDEVSEEEEEFGLDE---EDEDEDEDEEEEEGGKGEKRKRETDDEG 248
E D+ +DE ++ +E DE ED+D +E +EE EK ++D+ G
Sbjct: 674 EESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKLFDDSDERG 725
Score = 47.8 bits (112), Expect = 9e-06
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 20/100 (20%)
Query: 147 GYDREDQEAPDSDAEV----DGVDEEEEDEEGEDEEDED-----DEDGEEEEFDEEDDED 197
G + D++A + DA+ + D+E+ED +G++ ED D D+D E+ FDEE+D
Sbjct: 655 GLEAADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSS 714
Query: 198 EDVEGDEDDDEV-----SEEE------EEFGLDEEDEDED 226
E + D D+ S EE F L +D+D+D
Sbjct: 715 EKLFDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDD 754
Score = 45.8 bits (107), Expect = 4e-05
Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
++ED+E D ++ D++ E+ + +++ E+ +D E+E+ D ++ ED D + EDDD
Sbjct: 644 EKEDEEYADEKG-LEAADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDD- 701
Query: 209 VSEEEEEFGLDEEDEDEDEDEEEEEGGKG 237
E+ F +E+ ++ D+ +E G G
Sbjct: 702 --SNEKLFDEEEDSSEKLFDDSDERGTLG 728
Score = 42.7 bits (99), Expect = 3e-04
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 140 PQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGE----DEEDEDDEDGEEEEFDEEDD 195
P+ +G ++ E +G ++E EEG EED ++ +++ + D
Sbjct: 454 PEKEAEEGCPEKESEEGCPKRGFEGSCSQKESEEGNPVRGSEEDSPKKESKKKTL-KNDC 512
Query: 196 EDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
E+ + + +DD E EEE G +E E++D ++E +E ++ + ++ E E++
Sbjct: 513 EENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEEN 568
Score = 40.0 bits (92), Expect = 0.002
Identities = 35/115 (30%), Positives = 47/115 (40%), Gaps = 27/115 (23%)
Query: 163 DGVDEEEEDEEGEDEEDEDDEDGE----EEEFDE--------------EDDEDEDVEGDE 204
DG + EE E +E +++ E E+E +E E +E V G E
Sbjct: 436 DGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFEGSCSQKESEEGNPVRGSE 495
Query: 205 DDDEVSEEE--------EEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
+D E + EE GL +E ED+ E EEE G K E D E E D
Sbjct: 496 EDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGP-TKESEEDDSEKESD 549
Score = 37.7 bits (86), Expect = 0.010
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 168 EEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDED--- 224
EE+ + E ++ D EE +E ++D + E +E+ E EE+ E DED
Sbjct: 495 EEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSE 554
Query: 225 ---EDEDEEE-EEGGKGEKRKRETDDEGED 250
ED E E EE G +++ D+EG +
Sbjct: 555 KQSEDGSEREFEENG----LEKDLDEEGSE 580
Score = 28.5 bits (62), Expect = 5.8
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 182 DEDGEEEEFDEEDDEDEDVEGDEDD---DEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGE 238
+E +E++F++ +D E EG ++ + E+E E G E++ +E + EG +
Sbjct: 423 EEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFEGSCSQ 482
Query: 239 KRKRE 243
K E
Sbjct: 483 KESEE 487
>gi|4506411 Ran GTPase activating protein 1 [Homo sapiens]
Length = 587
Score = 63.9 bits (154), Expect = 1e-10
Identities = 53/197 (26%), Positives = 100/197 (50%), Gaps = 23/197 (11%)
Query: 66 LKKLELSENRI-FGGLDMLAEKL---PNLTHLNLSGNKLKD---ISTLEPLKKLECLKSL 118
L+++ + +N I G+ LA+ P L +NL+ N + ++ E LK L ++ +
Sbjct: 210 LEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVI 269
Query: 119 DLFNCEVTNLNDYR--ESVFKLLPQLTYLD---GYDREDQEAPDSDAEVDGVDEEEEDEE 173
+ +C V + +++ LP+L L+ + D ++A D + E+ D
Sbjct: 270 NFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLN 329
Query: 174 GEDEEDEDDEDGEE-----------EEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEED 222
G +E E +E +++DE+E+ EG+E+++E EEEEE +EE+
Sbjct: 330 GNTLGEEGCEQLQEVLEGFNMAKVLASLSDDEDEEEEEEGEEEEEEAEEEEEEDEEEEEE 389
Query: 223 EDEDEDEEEEEGGKGEK 239
E+E+E+EE ++ G+GEK
Sbjct: 390 EEEEEEEEPQQRGQGEK 406
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 63.5 bits (153), Expect = 2e-10
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 138 LLPQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDED 197
LL L + +R+ A S AE G EEE+EE E+EE+E+ EE E +EE++E+
Sbjct: 250 LLSDLQDISDSERKTSSAESSSAE-SGSGSEEEEEE-EEEEEEEGSTSEESEEEEEEEEE 307
Query: 198 EDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
E+ E + +E SE+ E + EE+ EDE+ E E R D GE +
Sbjct: 308 EEEETGSNSEEASEQSAE-EVSEEEMSEDEERENENHLLVVPESRFDRDSGESE 360
Score = 55.5 bits (132), Expect = 4e-08
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDED----VEGDEDD 206
E E D +++ + + E + + G EEE +EE++E+E+ E +E++
Sbjct: 243 EKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEE 302
Query: 207 DEVSEEEEEFGLDEEDEDEDEDEE--EEEGGKGEKRKRE 243
+E EEEEE G + E+ E EE EEE + E+R+ E
Sbjct: 303 EEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 341
Score = 52.8 bits (125), Expect = 3e-07
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 165 VDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDED 224
V EE+ +E + +D D E + E E G E+++E EEEEE G E+ +
Sbjct: 240 VKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESE 299
Query: 225 EDEDEEEEEGGKGEKRKRETDDEGEDD 251
E+E+EEEEE + E ++ ++
Sbjct: 300 EEEEEEEEEEEETGSNSEEASEQSAEE 326
Score = 45.1 bits (105), Expect = 6e-05
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDE--EDDEDEDVEGDEDD 206
+ E++E S +E +EEEE+EE E+E + E+ E+ +E E++ ED E + ++
Sbjct: 284 EEEEEEEEGSTSEESEEEEEEEEEE-EEETGSNSEEASEQSAEEVSEEEMSEDEERENEN 342
Query: 207 DEVSEEEEEFGLDEEDEDEDEDEEEEEG 234
+ E F + D E E+ EEE G
Sbjct: 343 HLLVVPESRF---DRDSGESEEAEEEVG 367
Score = 43.5 bits (101), Expect = 2e-04
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 169 EEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDED 228
E E G+ + +E EE + + + D E E S E G +EE+E+E +
Sbjct: 229 ERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEE--E 286
Query: 229 EEEEEGGKGEKRKRETDDEGEDD 251
EEEEEG E+ + E ++E E++
Sbjct: 287 EEEEEGSTSEESEEEEEEEEEEE 309
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.304 0.133 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,446,374
Number of Sequences: 37866
Number of extensions: 742507
Number of successful extensions: 65829
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1416
Number of HSP's successfully gapped in prelim test: 546
Number of HSP's that attempted gapping in prelim test: 7739
Number of HSP's gapped (non-prelim): 21254
length of query: 251
length of database: 18,247,518
effective HSP length: 100
effective length of query: 151
effective length of database: 14,460,918
effective search space: 2183598618
effective search space used: 2183598618
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.