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Search of human proteins with 5453998
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5453998 importin 7 [Homo sapiens]
(1038 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5453998 importin 7 [Homo sapiens] 2102 0.0
gi|53759103 importin 8 [Homo sapiens] 1373 0.0
gi|29029559 CSE1 chromosome segregation 1-like protein [Homo sap... 97 6e-20
gi|21361659 importin 9 [Homo sapiens] 59 3e-08
gi|198041777 Ran binding protein 11 isoform 1 [Homo sapiens] 57 1e-07
gi|39725950 Ran binding protein 11 isoform 2 [Homo sapiens] 57 1e-07
gi|55956788 nucleolin [Homo sapiens] 52 3e-06
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 50 1e-05
gi|115529449 upstream binding transcription factor, RNA polymera... 50 1e-05
gi|115529451 upstream binding transcription factor, RNA polymera... 50 1e-05
gi|7657671 upstream binding transcription factor, RNA polymerase... 50 1e-05
gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 fami... 46 2e-04
gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 46 2e-04
gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 46 2e-04
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 46 2e-04
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 45 3e-04
gi|215422388 death-domain associated protein isoform a [Homo sap... 45 3e-04
gi|215422366 death-domain associated protein isoform b [Homo sap... 45 3e-04
gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens] 45 3e-04
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 45 3e-04
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 45 3e-04
gi|7662316 HIV-1 Vpr binding protein [Homo sapiens] 45 5e-04
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 44 8e-04
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 44 8e-04
gi|21361639 DIPB protein [Homo sapiens] 44 0.001
gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens] 44 0.001
gi|113420848 PREDICTED: hypothetical protein [Homo sapiens] 43 0.001
gi|41406057 amyloid beta A4 protein isoform c precursor [Homo sa... 43 0.002
gi|41406055 amyloid beta A4 protein isoform b precursor [Homo sa... 43 0.002
gi|4502167 amyloid beta A4 protein isoform a precursor [Homo sap... 43 0.002
>gi|5453998 importin 7 [Homo sapiens]
Length = 1038
Score = 2102 bits (5447), Expect = 0.0
Identities = 1038/1038 (100%), Positives = 1038/1038 (100%)
Query: 1 MDPNTIIEALRGTMDPALREAAERQLNEAHKSLNFVSTLLQITMSEQLDLPVRQAGVIYL 60
MDPNTIIEALRGTMDPALREAAERQLNEAHKSLNFVSTLLQITMSEQLDLPVRQAGVIYL
Sbjct: 1 MDPNTIIEALRGTMDPALREAAERQLNEAHKSLNFVSTLLQITMSEQLDLPVRQAGVIYL 60
Query: 61 KNMITQYWPDRETAPGDISPYTIPEEDRHCIRENIVEAIIHSPELIRVQLTTCIHHIIKH 120
KNMITQYWPDRETAPGDISPYTIPEEDRHCIRENIVEAIIHSPELIRVQLTTCIHHIIKH
Sbjct: 61 KNMITQYWPDRETAPGDISPYTIPEEDRHCIRENIVEAIIHSPELIRVQLTTCIHHIIKH 120
Query: 121 DYPSRWTAIVDKIGFYLQSDNSACWLGILLCLYQLVKNYEYKKPEERSPLVAAMQHFLPV 180
DYPSRWTAIVDKIGFYLQSDNSACWLGILLCLYQLVKNYEYKKPEERSPLVAAMQHFLPV
Sbjct: 121 DYPSRWTAIVDKIGFYLQSDNSACWLGILLCLYQLVKNYEYKKPEERSPLVAAMQHFLPV 180
Query: 181 LKDRFIQLLSDQSDQSVLIQKQIFKIFYALVQYTLPLELINQQNLTEWIEILKTVVNRDV 240
LKDRFIQLLSDQSDQSVLIQKQIFKIFYALVQYTLPLELINQQNLTEWIEILKTVVNRDV
Sbjct: 181 LKDRFIQLLSDQSDQSVLIQKQIFKIFYALVQYTLPLELINQQNLTEWIEILKTVVNRDV 240
Query: 241 PNETLQVEEDDRPELPWWKCKKWALHILARLFERYGSPGNVSKEYNEFAEVFLKAFAVGV 300
PNETLQVEEDDRPELPWWKCKKWALHILARLFERYGSPGNVSKEYNEFAEVFLKAFAVGV
Sbjct: 241 PNETLQVEEDDRPELPWWKCKKWALHILARLFERYGSPGNVSKEYNEFAEVFLKAFAVGV 300
Query: 301 QQVLLKVLYQYKEKQYMAPRVLQQTLNYINQGVSHALTWKNLKPHIQGIIQDVIFPLMCY 360
QQVLLKVLYQYKEKQYMAPRVLQQTLNYINQGVSHALTWKNLKPHIQGIIQDVIFPLMCY
Sbjct: 301 QQVLLKVLYQYKEKQYMAPRVLQQTLNYINQGVSHALTWKNLKPHIQGIIQDVIFPLMCY 360
Query: 361 TDADEELWQEDPYEYIRMKFDVFEDFISPTTAAQTLLFTACSKRKEVLQKTMGFCYQILT 420
TDADEELWQEDPYEYIRMKFDVFEDFISPTTAAQTLLFTACSKRKEVLQKTMGFCYQILT
Sbjct: 361 TDADEELWQEDPYEYIRMKFDVFEDFISPTTAAQTLLFTACSKRKEVLQKTMGFCYQILT 420
Query: 421 EPNADPRKKDGALHMIGSLAEILLKKKIYKDQMEYMLQNHVFPLFSSELGYMRARACWVL 480
EPNADPRKKDGALHMIGSLAEILLKKKIYKDQMEYMLQNHVFPLFSSELGYMRARACWVL
Sbjct: 421 EPNADPRKKDGALHMIGSLAEILLKKKIYKDQMEYMLQNHVFPLFSSELGYMRARACWVL 480
Query: 481 HYFCEVKFKSDQNLQTALELTRRCLIDDREMPVKVEAAIALQVLISNQEKAKEYITPFIR 540
HYFCEVKFKSDQNLQTALELTRRCLIDDREMPVKVEAAIALQVLISNQEKAKEYITPFIR
Sbjct: 481 HYFCEVKFKSDQNLQTALELTRRCLIDDREMPVKVEAAIALQVLISNQEKAKEYITPFIR 540
Query: 541 PVMQALLHIIRETENDDLTNVIQKMICEYSEEVTPIAVEMTQHLAMTFNQVIQTGPDEEG 600
PVMQALLHIIRETENDDLTNVIQKMICEYSEEVTPIAVEMTQHLAMTFNQVIQTGPDEEG
Sbjct: 541 PVMQALLHIIRETENDDLTNVIQKMICEYSEEVTPIAVEMTQHLAMTFNQVIQTGPDEEG 600
Query: 601 SDDKAVTAMGILNTIDTLLSVVEDHKEITQQLEGICLQVIGTVLQQHVLEFYEEIFSLAH 660
SDDKAVTAMGILNTIDTLLSVVEDHKEITQQLEGICLQVIGTVLQQHVLEFYEEIFSLAH
Sbjct: 601 SDDKAVTAMGILNTIDTLLSVVEDHKEITQQLEGICLQVIGTVLQQHVLEFYEEIFSLAH 660
Query: 661 SLTCQQVSPQMWQLLPLVFEVFQQDGFDYFTDMMPLLHNYVTVDTDTLLSDTKYLEMIYS 720
SLTCQQVSPQMWQLLPLVFEVFQQDGFDYFTDMMPLLHNYVTVDTDTLLSDTKYLEMIYS
Sbjct: 661 SLTCQQVSPQMWQLLPLVFEVFQQDGFDYFTDMMPLLHNYVTVDTDTLLSDTKYLEMIYS 720
Query: 721 MCKKVLTGVAGEDAECHAAKLLEVIILQCKGRGIDQCIPLFVEAALERLTREVKTSELRT 780
MCKKVLTGVAGEDAECHAAKLLEVIILQCKGRGIDQCIPLFVEAALERLTREVKTSELRT
Sbjct: 721 MCKKVLTGVAGEDAECHAAKLLEVIILQCKGRGIDQCIPLFVEAALERLTREVKTSELRT 780
Query: 781 MCLQVAIAALYYNPHLLLNTLENLRFPNNVEPVTNHFITQWLNDVDCFLGLHDRKMCVLG 840
MCLQVAIAALYYNPHLLLNTLENLRFPNNVEPVTNHFITQWLNDVDCFLGLHDRKMCVLG
Sbjct: 781 MCLQVAIAALYYNPHLLLNTLENLRFPNNVEPVTNHFITQWLNDVDCFLGLHDRKMCVLG 840
Query: 841 LCALIDMEQIPQVLNQVSGQILPAFILLFNGLKRAYACHAEHENDSDDDDEAEDDDETEE 900
LCALIDMEQIPQVLNQVSGQILPAFILLFNGLKRAYACHAEHENDSDDDDEAEDDDETEE
Sbjct: 841 LCALIDMEQIPQVLNQVSGQILPAFILLFNGLKRAYACHAEHENDSDDDDEAEDDDETEE 900
Query: 901 LGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGYSTIIDDEDNPVDEYQ 960
LGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGYSTIIDDEDNPVDEYQ
Sbjct: 901 LGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGYSTIIDDEDNPVDEYQ 960
Query: 961 IFKAIFQTIQNRNPVWYQALTHGLNEEQRKQLQDIATLADQRRAAHESKMIEKHGGYKFS 1020
IFKAIFQTIQNRNPVWYQALTHGLNEEQRKQLQDIATLADQRRAAHESKMIEKHGGYKFS
Sbjct: 961 IFKAIFQTIQNRNPVWYQALTHGLNEEQRKQLQDIATLADQRRAAHESKMIEKHGGYKFS 1020
Query: 1021 APVVPSSFNFGGPAPGMN 1038
APVVPSSFNFGGPAPGMN
Sbjct: 1021 APVVPSSFNFGGPAPGMN 1038
>gi|53759103 importin 8 [Homo sapiens]
Length = 1037
Score = 1373 bits (3554), Expect = 0.0
Identities = 668/1033 (64%), Positives = 822/1033 (79%), Gaps = 4/1033 (0%)
Query: 1 MDPNTIIEALRGTMDPALREAAERQLNEAHKSLNFVSTLLQITMSEQLDLPVRQAGVIYL 60
MD N II+AL+GT+DP LR AAE +LN+++K +NF +LL+I +S+ ++ PVRQA IYL
Sbjct: 1 MDLNRIIQALKGTIDPKLRIAAENELNQSYKIINFAPSLLRIIVSDHVEFPVRQAAAIYL 60
Query: 61 KNMITQYWPDRETAPGD-ISPYTIPEEDRHCIRENIVEAIIHSPELIRVQLTTCIHHIIK 119
KNM+TQYWPDRE PG+ I P+ I E DR IR+NIVE II SP+L+RVQLT C+ IIK
Sbjct: 61 KNMVTQYWPDREPPPGEAIFPFNIHENDRQQIRDNIVEGIIRSPDLVRVQLTMCLRAIIK 120
Query: 120 HDYPSRWTAIVDKIGFYLQSDNSACWLGILLCLYQLVKNYEYKKPEERSPLVAAMQHFLP 179
HD+P W +VDKI +YLQS +SA WLG LLCLYQLVK YEYKK EER PL+ AMQ FLP
Sbjct: 121 HDFPGHWPGVVDKIDYYLQSQSSASWLGSLLCLYQLVKTYEYKKAEEREPLIIAMQIFLP 180
Query: 180 VLKDRFIQLLSDQSDQSVLIQKQIFKIFYALVQYTLPLELINQQNLTEWIEILKTVVNRD 239
++ + +QLL D S SVL+QKQI KIFYALVQY LPL+L+N Q +T W+EI +T+++R
Sbjct: 181 RIQQQIVQLLPDSSYYSVLLQKQILKIFYALVQYALPLQLVNNQTMTTWMEIFRTIIDRT 240
Query: 240 VPNETLQVEEDDRPELPWWKCKKWALHILARLFERYGSPGNVSKEYNEFAEVFLKAFAVG 299
VP ETL ++EDDRPEL WWKCKKWALHI+ARLFERYGSPGNV+KEY EF+E FLK +AVG
Sbjct: 241 VPPETLHIDEDDRPELVWWKCKKWALHIVARLFERYGSPGNVTKEYFEFSEFFLKTYAVG 300
Query: 300 VQQVLLKVLYQYKEKQYMAPRVLQQTLNYINQGVSHALTWKNLKPHIQGIIQDVIFPLMC 359
+QQVLLK+L QY++K+Y+APRVLQQ NY+NQGV H++TWK +KPHIQ I +DVIF +MC
Sbjct: 301 IQQVLLKILDQYRQKEYVAPRVLQQAFNYLNQGVVHSITWKQMKPHIQNISEDVIFSVMC 360
Query: 360 YTDADEELWQEDPYEYIRMKFDVFEDFISPTTAAQTLLFTACSKRKEVLQKTMGFCYQIL 419
Y D DEELWQEDPYEYIRMKFD+FED+ SPTTAAQTLL+TA KRKEVL K M FCYQIL
Sbjct: 361 YKDEDEELWQEDPYEYIRMKFDIFEDYASPTTAAQTLLYTAAKKRKEVLPKMMAFCYQIL 420
Query: 420 TEPNADPRKKDGALHMIGSLAEILLKKKIYKDQMEYMLQNHVFPLFSSELGYMRARACWV 479
T+PN DPRKKDGALH+IGSLAEILLKK ++KDQME LQNHVFPL S LGY+RAR+CWV
Sbjct: 421 TDPNFDPRKKDGALHVIGSLAEILLKKSLFKDQMELFLQNHVFPLLLSNLGYLRARSCWV 480
Query: 480 LHYFCEVKFKSDQNLQTALELTRRCLIDDREMPVKVEAAIALQVLISNQEKAKEYITPFI 539
LH F +KF ++ NL+ A+EL ++ LI+D+EMPVKVEAA+ALQ LISNQ +AKEY+ P +
Sbjct: 481 LHAFSSLKFHNELNLRNAVELAKKSLIEDKEMPVKVEAALALQSLISNQIQAKEYMKPHV 540
Query: 540 RPVMQALLHIIRETENDDLTNVIQKMICEYSEEVTPIAVEMTQHLAMTFNQVIQTGPDEE 599
RP+MQ LLHI+RETENDD+TNVIQKMICEYS+EV IAV+MTQHLA F +V+Q+ EE
Sbjct: 541 RPIMQELLHIVRETENDDVTNVIQKMICEYSQEVASIAVDMTQHLAEIFGKVLQSDEYEE 600
Query: 600 GSDDKAVTAMGILNTIDTLLSVVEDHKEITQQLEGICLQVIGTVLQQHVLEFYEEIFSLA 659
+DK V AMGIL+TIDT+L+VVEDHKEITQQLE ICL++I VLQ+HV+EFYEEI SLA
Sbjct: 601 -VEDKTVMAMGILHTIDTILTVVEDHKEITQQLENICLRIIDLVLQKHVIEFYEEILSLA 659
Query: 660 HSLTCQQVSPQMWQLLPLVFEVFQQDGFDYFTDMMPLLHNYVTVDTDTLLSDTKYLEMIY 719
+SLTC +SPQMWQLL +++EVFQQD F+YFTDMMPLLHNYVT+DTDTLLS+ K+LE+++
Sbjct: 660 YSLTCHSISPQMWQLLGILYEVFQQDCFEYFTDMMPLLHNYVTIDTDTLLSNAKHLEILF 719
Query: 720 SMCKKVLTGVAGEDAECHAAKLLEVIILQCKGRGIDQCIPLFVEAALERLTREVKTSELR 779
+MC+KVL G AGEDAECHAAKLLEVIILQCKGRGIDQCIPLFV+ LERLTR VKTSELR
Sbjct: 720 TMCRKVLCGDAGEDAECHAAKLLEVIILQCKGRGIDQCIPLFVQLVLERLTRGVKTSELR 779
Query: 780 TMCLQVAIAALYYNPHLLLNTLENLRFPNNVEPVTNHFITQWLNDVDCFLGLHDRKMCVL 839
TMCLQVAIAALYYNP LLL+TLE ++ P+N P+T FI QW+ND DCFLG HDRKMC++
Sbjct: 780 TMCLQVAIAALYYNPDLLLHTLERIQLPHNPGPITVQFINQWMNDTDCFLGHHDRKMCII 839
Query: 840 GLCALIDMEQIPQVLNQVSGQILPAFILLFNGLKRAYACHAEHENDSDDDDEAEDDDETE 899
GL L++++ P ++ V GQI+P+ + LF GLK+ A + E D +E E
Sbjct: 840 GLSILLELQNRPPAVDAVVGQIVPSILFLFLGLKQVCATRQLVNREDRSKAEKADMEENE 899
Query: 900 ELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGYSTIIDDEDNPVDEY 959
E+ SDE++ + Q + E+ +D+DW+E+ EETALEG+ST + D DN VDEY
Sbjct: 900 EISSDEEETNVTAQAMQSNNGRGEDEEEEDDDWDEEVLEETALEGFSTPL-DLDNSVDEY 958
Query: 960 QIFKAIFQTIQNRNPVWYQALTHGLNEEQRKQLQDIATLADQRRAAHES-KMIEKHGGYK 1018
Q F T+Q+R+ WYQ L L+E+QR LQ++ TLA+ RR E+ K IE+ GG+
Sbjct: 959 QFFTQALITVQSRDAAWYQLLMAPLSEDQRTALQEVYTLAEHRRTVAEAKKKIEQQGGFT 1018
Query: 1019 FSAPVVPSSFNFG 1031
F V S+FNFG
Sbjct: 1019 FENKGVLSAFNFG 1031
>gi|29029559 CSE1 chromosome segregation 1-like protein [Homo
sapiens]
Length = 971
Score = 97.4 bits (241), Expect = 6e-20
Identities = 124/486 (25%), Positives = 209/486 (43%), Gaps = 55/486 (11%)
Query: 5 TIIEALRGTMDP--ALREAAERQLNEAHKSLNFVSTLLQITMSEQLDLPVRQAGVIYLKN 62
T+ E L+ T+DP A+R AE+ L + N+ LL + Q D ++ + KN
Sbjct: 10 TLTEYLKKTLDPDPAIRRPAEKFLESVEGNQNYPLLLLTLLEKSQ-DNVIKVCASVTFKN 68
Query: 63 MITQYWPDRETAPGDISPYTIPEEDRHCIRENIVEAIIHSPELIRVQLTTCIHHIIKHDY 122
I + W E P I E DR I+ NIV ++ SPE I+ QL+ I I + D+
Sbjct: 69 YIKRNWRIVEDEPNKIC-----EADRVAIKANIVHLMLSSPEQIQKQLSDAISIIGREDF 123
Query: 123 PSRWTAIVDKIGFYLQSDNSACWLGILLCLYQLVKNY--EYKKPEERSPLVAAMQHFLPV 180
P +W ++ ++ QS + G+L + L K Y E+K E + + + F
Sbjct: 124 PQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRYRHEFKSNELWTEIKLVLDAFALP 183
Query: 181 LKDRF---IQLLS----DQSDQSVLIQKQIF--KIFYALVQYTLPLELINQQNLTEWIEI 231
L + F I+L S D S +L I K+FY+L LP + N+ W+
Sbjct: 184 LTNLFKATIELCSTHANDASALRILFSSLILISKLFYSLNFQDLP--EFFEDNMETWMNN 241
Query: 232 LKTVVNRDVPNETLQVEEDDRPELPWWKCKKWALHILARLFERYGSPGNVSKEYNEFAEV 291
T++ D N+ LQ DD E + K + A L+ +++Y+E +
Sbjct: 242 FHTLLTLD--NKLLQT--DDEEEAGLLELLKSQICDNAALY---------AQKYDEEFQR 288
Query: 292 FLKAFAVGVQQVLLKVLYQYKEKQYMAPRVLQQTLNYINQGVSHALTWKNL---KPHIQG 348
+L F + +L+ + K ++ + ++ V +KNL + +
Sbjct: 289 YLPRFVTAIWNLLVTTGQEVK-----YDLLVSNAIQFL-ASVCERPHYKNLFEDQNTLTS 342
Query: 349 IIQDVIFPLMCYTDADEELWQEDPYEYIRMKFDVFEDFISPTTAAQTLLFTACS-KRKEV 407
I + VI P M + ADEE ++++ EYIR + D + AA L+ C V
Sbjct: 343 ICEKVIVPNMEFRAADEEAFEDNSEEYIRRDLE-GSDIDTRRRAACDLVRGLCKFFEGPV 401
Query: 408 LQKTMGFCYQILTE----PNADPRKKDGALHMIGSLAEILLKKKIYKDQMEYMLQ----- 458
G+ +L E P+ + + KD A++++ SLA +K Q ++
Sbjct: 402 TGIFSGYVNSMLQEYAKNPSVNWKHKDAAIYLVTSLASKAQTQKHGITQANELVNLTEFF 461
Query: 459 -NHVFP 463
NH+ P
Sbjct: 462 VNHILP 467
>gi|21361659 importin 9 [Homo sapiens]
Length = 1041
Score = 58.5 bits (140), Expect = 3e-08
Identities = 203/1094 (18%), Positives = 395/1094 (36%), Gaps = 183/1094 (16%)
Query: 6 IIEALRGTMDPA--LREAAERQLNEAHKSLNFVSTLLQITMSEQLDLPVRQAGVIYLKNM 63
+++ L G + P +R AAE Q+ + F L ++T+ Q L +RQ + LK
Sbjct: 25 LVDTLTGILSPVQEVRAAAEEQIKVLEVTEEFGVHLAELTVDPQGALAIRQLASVILKQY 84
Query: 64 ITQYWPDRETAPGDISPYTIPEEDRHCIRENIVEAIIHSPELIRVQLTTCIHHIIKHDYP 123
+ +W + P E + IRE + + S +R + + I D+P
Sbjct: 85 VETHWCAQSE---KFRPPETTERAKIVIRELLPNGLRESISKVRSSVAYAVSAIAHWDWP 141
Query: 124 SRWTAIVDKIGFYLQSDNSACWLGILLCLYQLVKNYEYKKPEERSPLVAAMQHFLPVLKD 183
W + + + L S + G + L + + + + + PLVA PV+
Sbjct: 142 EAWPQLFNLLMEMLVSGDLNAVHGAMRVLTEFTR----EVTDTQMPLVA------PVILP 191
Query: 184 RFIQLLSDQSDQSVLIQKQIFKIFYALVQYTLPLELINQQNLTEWIEILKTVVNRDVPNE 243
++ + + + + +IF +E + + ++L V +
Sbjct: 192 EMYKIFTMAEVYGIRTRSRAVEIFTTCAHMICNMEELEKGA----AKVLIFPVVQQFTEA 247
Query: 244 TLQVEEDDRPELPWWKCKKWALHILARLFERYGSPGNVSKEYNEFAEVFLKAFAVGVQQV 303
+Q AL I G V K + F K +QQ+
Sbjct: 248 FVQ-----------------ALQIPDGPTSDSGFKMEVLKAVTALVKNFPKHMVSSMQQI 290
Query: 304 LLKVLYQYKEKQYMAPRVLQQTLNYINQ------GVSHALTWKNL--------------- 342
L V E A ++ +NY + L ++NL
Sbjct: 291 LPIVWNTLTES---AAFYVRTEVNYTEEVEDPVDSDGEVLGFENLVFSIFEFVHALLENS 347
Query: 343 --KPHIQGIIQDVIFPLMCYTDADEE---LWQEDPYEYIRMKFDVFEDFISPTTAAQTLL 397
K ++ + ++I+ ++ Y EE +W +P +++ + D + A LL
Sbjct: 348 KFKSTVKKALPELIYYIILYMQITEEQIKVWTANPQQFVEDEDDDTFSYTVRIAAQDLLL 407
Query: 398 FTACSKRKEVLQKTMGFCYQILTEPNADPRKKDGALH----------MIGSLAEILLKK- 446
A + E + L E A+ K G H +GS+ I+
Sbjct: 408 AVATDFQNESAAALAAAATRHLQE--AEQTKNSGTEHWWKIHEACMLALGSVKAIITDSV 465
Query: 447 ---KIYKDQMEYMLQNHVFPLFSSELGYMRARACWVLHYFCEVKFKSDQNLQTALELTRR 503
+I+ D ++ + L S ++ RA W F S + +Q L+ T
Sbjct: 466 KNGRIHFDMHGFLTNVILADLNLSVSPFLLGRALWAASRFTVA--MSPELIQQFLQATVS 523
Query: 504 CLIDDREMPVKVEAAIAL-----QVLISNQEKAKEYITPFIRPVMQALLHIIRETENDDL 558
L + + V++ A A+ Q+ +S ++ + PF+ ++ L+H+ + ++ L
Sbjct: 524 GLHETQPPSVRISAVRAIWGYCDQLKVS---ESTHVLQPFLPSILDGLIHLAAQFSSEVL 580
Query: 559 TNVIQKMIC-------EYSEEVTPIAVEMTQHLAMTFNQ---VIQTGPD--EEGSDDKAV 606
N++ + +C E++ + T + + ++ V D +E S +A
Sbjct: 581 -NLVMETLCIVCTVDPEFTASMESKICPFTIAIFLKYSNDPVVASLAQDIFKELSQIEAC 639
Query: 607 TAMGILNTIDTLLSVVE-DHKEITQQLEGICLQVIGTVLQQHVLEFYEEIFSLAHSLTCQ 665
+ I TL+S+++ +I L + ++ TV++ L+ L CQ
Sbjct: 640 QGPMQMRLIPTLVSIMQAPADKIPAGLCATAIDILTTVVRNTKP-------PLSQLLICQ 692
Query: 666 QVSPQMWQLLPLVFEVFQQDGFDYFTDMMPLLHNYVTVDTDTLL-----SDTKYLEMIYS 720
L Q+G + L YV+V + + L +
Sbjct: 693 AFPAVAQCTLHTDDNATMQNGGE-------CLRAYVSVTLEQVAQWHDEQGHNGLWYVMQ 745
Query: 721 MCKKVLTGVAGEDAECHAAKLLEVIILQCKGRGIDQCIPLFVEAALERLTREVKTSELRT 780
+ ++L E +L+ +I + GR + + + + A L ++ ++ +T +
Sbjct: 746 VVSQLLDPRTSEFTAAFVGRLVSTLISKA-GRELGENLDQILRAILSKM-QQAETLSVMQ 803
Query: 781 MCLQVAIAALYYNPHLLLNTLENLRFPNNVEPVTNHFITQWLNDVDCFLGLHDRKMCVLG 840
+ V ++ LL L +L P +P + +W + F G ++ K+ +
Sbjct: 804 SLIMVFAHLVHTQLEPLLEFLCSLPGPTG-KPALEFVMAEWTSRQHLFYGQYEGKVSSVA 862
Query: 841 LCALI------DMEQIPQVLNQVSGQ---------------------------ILPAFIL 867
LC L+ D +++ + +V G+ ++ L
Sbjct: 863 LCKLLQHGINADDKRLQDI--RVKGEEIYSMDEGIRTRSKSAKNPERWTNIPLLVKILKL 920
Query: 868 LFNGLKRAYACHAEHE------NDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAK 921
+ N L +A + + D +D ED +E EE +ED + GQ +ILA
Sbjct: 921 IINELSNVMEANAARQATPAEWSQDDSNDMWEDQEEEEE--EEEDGL--AGQLLSDILAT 976
Query: 922 QAGEDGDDEDWEEDDAEETALEGYSTIIDDEDNPVDEYQIFKAIFQTIQNRNPVWYQALT 981
E+ ED EEDD + AL+ ID Q + F + P +
Sbjct: 977 SKYEEDYYEDDEEDDPD--ALKDPLYQID--------LQAYLTDFLCQFAQQPCYIMFSG 1026
Query: 982 HGLNEEQRKQLQDI 995
H LN+ +R+ LQ I
Sbjct: 1027 H-LNDNERRVLQTI 1039
>gi|198041777 Ran binding protein 11 isoform 1 [Homo sapiens]
Length = 1015
Score = 56.6 bits (135), Expect = 1e-07
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
Query: 13 TMDPALREAAERQLNEAHKSLNFVSTLLQITMSEQLDLPVRQAGVIYLKNMITQYWPDRE 72
+ D A+ + AE QL + F S LL I + LD+ VR V+Y K+ I +YW
Sbjct: 59 SQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRWLAVLYFKHGIDRYW---- 114
Query: 73 TAPGDISPYTIPEEDRHCIRENIVEAIIHSPELIRVQLTTCIHHIIKHDYPSRWTAIVDK 132
++P+ + EE++ +R ++ I Q+ I + + D P +W ++
Sbjct: 115 ---RRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPT 171
Query: 133 IGFYLQSDNSACWLGILLCLYQLVKNYEYKK 163
+ ++ + LL Y + K K+
Sbjct: 172 LIESVKVQDDLRQHRALLTFYHVTKTLASKR 202
Score = 48.1 bits (113), Expect = 4e-05
Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 22/261 (8%)
Query: 344 PHIQGIIQDVIFPLMCYTDADEELWQEDPYEYIRMKF--DVFEDFISPTTAAQTLLFTAC 401
P + I + ++ T+ + +W+EDP + + D ++ + P T + L
Sbjct: 400 PTLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCT--EVLFIDIF 457
Query: 402 SKRKEVLQKTMGFCYQILTEP-NADPRK----KDGALHMIGSLAEILLKKKIYKDQMEYM 456
+ + L + Q L P N + KD + +G LA L + DQ
Sbjct: 458 HEYNQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVG-LAAYELFDSVDFDQW--- 513
Query: 457 LQNHVFP---LFSSELGYMRARACWVLHYFCEVKFKSDQNLQTALELTRRCLIDDREMPV 513
+N + P + + +R R W++ + VKFKSD L+ L L+ D+++ V
Sbjct: 514 FKNQLLPELQVIHNRYKPLRRRVIWLIGQWISVKFKSD--LRPMLYEAICNLLQDQDLVV 571
Query: 514 KVEAAIALQVLISNQEKAKEYITPFIRPVMQALLHIIRE-TENDDLTNVIQKMIC---EY 569
++E A L++ + + E + P++ + L ++++ TE D +V+ + C
Sbjct: 572 RIETATTLKLTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERV 631
Query: 570 SEEVTPIAVEMTQHLAMTFNQ 590
+ ++ P + Q+L + + Q
Sbjct: 632 NMQIRPYVGCLVQYLPLLWKQ 652
>gi|39725950 Ran binding protein 11 isoform 2 [Homo sapiens]
Length = 975
Score = 56.6 bits (135), Expect = 1e-07
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
Query: 13 TMDPALREAAERQLNEAHKSLNFVSTLLQITMSEQLDLPVRQAGVIYLKNMITQYWPDRE 72
+ D A+ + AE QL + F S LL I + LD+ VR V+Y K+ I +YW
Sbjct: 19 SQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRWLAVLYFKHGIDRYW---- 74
Query: 73 TAPGDISPYTIPEEDRHCIRENIVEAIIHSPELIRVQLTTCIHHIIKHDYPSRWTAIVDK 132
++P+ + EE++ +R ++ I Q+ I + + D P +W ++
Sbjct: 75 ---RRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPT 131
Query: 133 IGFYLQSDNSACWLGILLCLYQLVKNYEYKK 163
+ ++ + LL Y + K K+
Sbjct: 132 LIESVKVQDDLRQHRALLTFYHVTKTLASKR 162
Score = 48.1 bits (113), Expect = 4e-05
Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 22/261 (8%)
Query: 344 PHIQGIIQDVIFPLMCYTDADEELWQEDPYEYIRMKF--DVFEDFISPTTAAQTLLFTAC 401
P + I + ++ T+ + +W+EDP + + D ++ + P T + L
Sbjct: 360 PTLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCT--EVLFIDIF 417
Query: 402 SKRKEVLQKTMGFCYQILTEP-NADPRK----KDGALHMIGSLAEILLKKKIYKDQMEYM 456
+ + L + Q L P N + KD + +G LA L + DQ
Sbjct: 418 HEYNQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVG-LAAYELFDSVDFDQW--- 473
Query: 457 LQNHVFP---LFSSELGYMRARACWVLHYFCEVKFKSDQNLQTALELTRRCLIDDREMPV 513
+N + P + + +R R W++ + VKFKSD L+ L L+ D+++ V
Sbjct: 474 FKNQLLPELQVIHNRYKPLRRRVIWLIGQWISVKFKSD--LRPMLYEAICNLLQDQDLVV 531
Query: 514 KVEAAIALQVLISNQEKAKEYITPFIRPVMQALLHIIRE-TENDDLTNVIQKMIC---EY 569
++E A L++ + + E + P++ + L ++++ TE D +V+ + C
Sbjct: 532 RIETATTLKLTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERV 591
Query: 570 SEEVTPIAVEMTQHLAMTFNQ 590
+ ++ P + Q+L + + Q
Sbjct: 592 NMQIRPYVGCLVQYLPLLWKQ 612
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 52.0 bits (123), Expect = 3e-06
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Query: 872 LKRAYACHAEHENDSDDDDEAEDDDETEELGSDEDDIDED---GQEYLEILAKQAGEDGD 928
+K A A A + D +DD++ EDDD+ EE S+E+ ++ G++ +++ +A +
Sbjct: 175 MKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAE 234
Query: 929 DEDWEEDDAEETALEGYSTIIDDEDNPVDE 958
DED EEDD +E DD+D+ DE
Sbjct: 235 DEDEEEDDEDE----------DDDDDEDDE 254
Score = 48.5 bits (114), Expect = 3e-05
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 859 GQILPAFILLFNGLKRAYACHAEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEI 918
G +PA G K E ++ +DDD ED+++ E+ DED+I+ +
Sbjct: 126 GAAIPA-----KGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAA 180
Query: 919 LAKQAGEDG-------DDEDWEEDDAEETALE 943
ED DD+D EEDD+EE A+E
Sbjct: 181 APASEDEDDEDDEDDEDDDDDEEDDSEEEAME 212
Score = 43.1 bits (100), Expect = 0.001
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 881 EHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEET 940
E + D +DDD+ E+DD EE + + + + AK ED D+E+ +ED+ ++
Sbjct: 190 EDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDD- 248
Query: 941 ALEGYSTIIDDEDNPVDE 958
DDED+ D+
Sbjct: 249 ---------DDEDDEDDD 257
Score = 41.6 bits (96), Expect = 0.004
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 871 GLKRAYACHAEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDE 930
G K A + +N ++D+DE E DDE E+ DEDD D+D D DDE
Sbjct: 218 GKKAAKVVPVKAKNVAEDEDEEE-DDEDEDDDDDEDDEDDD--------------DEDDE 262
Query: 931 DWEEDDAEETALE 943
+ EE++ EE E
Sbjct: 263 EEEEEEEEEPVKE 275
Score = 40.0 bits (92), Expect = 0.011
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 881 EHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGE 925
+ + + DD+DE +DDDE +E DEDD +E+ +E E + + G+
Sbjct: 235 DEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGK 279
Score = 33.9 bits (76), Expect = 0.82
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 25/74 (33%)
Query: 887 DDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGYS 946
+D DE EDDD S+ED+ ED +DED +ED+ E A++ +
Sbjct: 143 EDSDEEEDDD------SEEDE-----------------EDDEDEDEDEDEIEPAAMKAAA 179
Query: 947 T--IIDDEDNPVDE 958
+DED+ DE
Sbjct: 180 AAPASEDEDDEDDE 193
Score = 33.5 bits (75), Expect = 1.1
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 881 EHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQ 922
+ ++D DD+D+ ++DDE EE +E+ + E + + +AKQ
Sbjct: 246 DDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQ 287
Score = 31.2 bits (69), Expect = 5.3
Identities = 14/53 (26%), Positives = 29/53 (54%)
Query: 881 EHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWE 933
+ +++ D+DD+ EDD+E EE +E + G+ E+ ++A + + E
Sbjct: 247 DDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVE 299
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 50.1 bits (118), Expect = 1e-05
Identities = 33/129 (25%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 876 YACHAEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEED 935
Y+ + D D++DE D +E EE+ +++D DEDG+ ++ ++ E+ ++E+ EE+
Sbjct: 110 YSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGE---DVEDEEEEEEEEEEEEEEE 166
Query: 936 DAEETALEGYSTII----DDEDNPVDEYQ-----IFKAIFQTIQNRNPVWYQALTHG-LN 985
+ E+ + ++T I + +DN DEY + K++ + Y+A T +N
Sbjct: 167 ENEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDELVAKSLLNLGKIAEDAAYRARTESEMN 226
Query: 986 EEQRKQLQD 994
L+D
Sbjct: 227 SNTSNSLED 235
Score = 43.1 bits (100), Expect = 0.001
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 885 DSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEG 944
DS DE +D D TE++ E+D +G+EY E + ED +DE+ + ++ EE E
Sbjct: 83 DSSSVDECDDSDGTEDMDEKEED---EGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEED 139
Query: 945 YSTIIDDED 953
DDED
Sbjct: 140 ED---DDED 145
Score = 42.0 bits (97), Expect = 0.003
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 885 DSDDDDEAEDDDETEELGSDEDDIDEDG--QEYLEILAKQAGEDGDDEDWEEDDAEETAL 942
D ++DE E+ E + DED+ DE+G +E EI + +D D ED E+++ EE
Sbjct: 100 DEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEE 159
Query: 943 EGYSTIIDDEDNPVD 957
E ++ED+ ++
Sbjct: 160 EEEEEEEENEDHQMN 174
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 49.7 bits (117), Expect = 1e-05
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 881 EHENDSDDDDEAEDDDETEELGSDED---DIDEDGQEYLEILAKQAGEDGDDEDWEEDDA 937
+ +++S++DDE ++DDE E+ ++D D EDG + E ++ EDGD+ EEDD
Sbjct: 635 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDEN--EEDDE 692
Query: 938 EETALEGYSTIIDDEDNPVDE 958
+E DDED+ DE
Sbjct: 693 DED---------DDEDDDEDE 704
Score = 44.7 bits (104), Expect = 5e-04
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 14/80 (17%)
Query: 880 AEHENDSDDDDEAEDDDETEELGSDED-DIDEDGQEYLEILAKQAGEDGD---------- 928
++ E++ DD+++ +D+DE EE DE+ D EDG + E ++ EDGD
Sbjct: 636 SKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDED 695
Query: 929 -DEDWEEDDAEETALEGYST 947
DED +ED+ E+ EG S+
Sbjct: 696 DDEDDDEDEDNES--EGSSS 713
Score = 38.1 bits (87), Expect = 0.043
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 883 ENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDED 931
E++S+D DE E+DDE E+ D++D DED E + + GD D
Sbjct: 678 EDESEDGDENEEDDEDED---DDEDDDEDEDNESEGSSSSSSSSGDSSD 723
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 49.7 bits (117), Expect = 1e-05
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 881 EHENDSDDDDEAEDDDETEELGSDED---DIDEDGQEYLEILAKQAGEDGDDEDWEEDDA 937
+ +++S++DDE ++DDE E+ ++D D EDG + E ++ EDGD+ EEDD
Sbjct: 635 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDEN--EEDDE 692
Query: 938 EETALEGYSTIIDDEDNPVDE 958
+E DDED+ DE
Sbjct: 693 DED---------DDEDDDEDE 704
Score = 44.7 bits (104), Expect = 5e-04
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 14/80 (17%)
Query: 880 AEHENDSDDDDEAEDDDETEELGSDED-DIDEDGQEYLEILAKQAGEDGD---------- 928
++ E++ DD+++ +D+DE EE DE+ D EDG + E ++ EDGD
Sbjct: 636 SKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDED 695
Query: 929 -DEDWEEDDAEETALEGYST 947
DED +ED+ E+ EG S+
Sbjct: 696 DDEDDDEDEDNES--EGSSS 713
Score = 38.1 bits (87), Expect = 0.043
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 883 ENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDED 931
E++S+D DE E+DDE E+ D++D DED E + + GD D
Sbjct: 678 EDESEDGDENEEDDEDED---DDEDDDEDEDNESEGSSSSSSSSGDSSD 723
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 49.7 bits (117), Expect = 1e-05
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 881 EHENDSDDDDEAEDDDETEELGSDED---DIDEDGQEYLEILAKQAGEDGDDEDWEEDDA 937
+ +++S++DDE ++DDE E+ ++D D EDG + E ++ EDGD+ EEDD
Sbjct: 672 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDEN--EEDDE 729
Query: 938 EETALEGYSTIIDDEDNPVDE 958
+E DDED+ DE
Sbjct: 730 DED---------DDEDDDEDE 741
Score = 44.7 bits (104), Expect = 5e-04
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 14/80 (17%)
Query: 880 AEHENDSDDDDEAEDDDETEELGSDED-DIDEDGQEYLEILAKQAGEDGD---------- 928
++ E++ DD+++ +D+DE EE DE+ D EDG + E ++ EDGD
Sbjct: 673 SKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDED 732
Query: 929 -DEDWEEDDAEETALEGYST 947
DED +ED+ E+ EG S+
Sbjct: 733 DDEDDDEDEDNES--EGSSS 750
Score = 38.1 bits (87), Expect = 0.043
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 883 ENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDED 931
E++S+D DE E+DDE E+ D++D DED E + + GD D
Sbjct: 715 EDESEDGDENEEDDEDED---DDEDDDEDEDNESEGSSSSSSSSGDSSD 760
>gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member E isoform 1 [Homo sapiens]
Length = 268
Score = 46.2 bits (108), Expect = 2e-04
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 879 HAEHENDSDDDDEAEDDDETE---ELGSDEDDIDEDGQEYLEILAKQAGEDGDD---EDW 932
+ E E + +++DE ED+DE E ELG E+++ G YL Q ED DD E
Sbjct: 184 YEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEV---GLSYLMKEEIQDEEDDDDYVEEGE 240
Query: 933 EEDDAEETALEGYSTIIDDEDNPVDE 958
EE++ EE L G D ED+ +E
Sbjct: 241 EEEEEEEGGLRGEKRKRDAEDDGEEE 266
Score = 38.9 bits (89), Expect = 0.025
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 822 LNDVDCFLGLHDRKMCVLGLCALIDMEQIPQVLNQVSGQILPAFILLFNGLKRAYACHAE 881
L+ V+ L + K L C + ++E + + ++ QI Y +
Sbjct: 103 LSTVEALQNLKNLKSLDLFNCEITNLEDYRESIFELLQQI-------------TYLDGFD 149
Query: 882 HENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETA 941
E++ D E EDD++ +E +E++ + E E ++ E+ +DED +ED+A
Sbjct: 150 QEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSEL 209
Query: 942 LEG 944
EG
Sbjct: 210 GEG 212
Score = 36.6 bits (83), Expect = 0.13
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 25/81 (30%)
Query: 881 EHENDSDDDDEAEDDDET--------EELG------------SDEDDIDEDGQEYLE--- 917
E E + +D+DE ED+DE EE+G D+DD E+G+E E
Sbjct: 188 EEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEE 247
Query: 918 --ILAKQAGEDGDDEDWEEDD 936
+ ++ D +D+ EEDD
Sbjct: 248 GGLRGEKRKRDAEDDGEEEDD 268
>gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 2 [Homo sapiens]
Length = 227
Score = 46.2 bits (108), Expect = 2e-04
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 879 HAEHENDSDDDDEAEDDDETE---ELGSDEDDIDEDGQEYLEILAKQAGEDGDD---EDW 932
+ E E + +++DE ED+DE E ELG E+++ G YL Q ED DD E
Sbjct: 143 YEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEV---GLSYLMKEEIQDEEDDDDYVEEGE 199
Query: 933 EEDDAEETALEGYSTIIDDEDNPVDE 958
EE++ EE L G D ED+ +E
Sbjct: 200 EEEEEEEGGLRGEKRKRDAEDDGEEE 225
Score = 37.4 bits (85), Expect = 0.074
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 881 EHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEET 940
+ E++ D E EDD++ +E +E++ + E E ++ E+ +DED +ED+A
Sbjct: 108 DQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSE 167
Query: 941 ALEG 944
EG
Sbjct: 168 LGEG 171
Score = 36.6 bits (83), Expect = 0.13
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 25/81 (30%)
Query: 881 EHENDSDDDDEAEDDDET--------EELG------------SDEDDIDEDGQEYLE--- 917
E E + +D+DE ED+DE EE+G D+DD E+G+E E
Sbjct: 147 EEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEE 206
Query: 918 --ILAKQAGEDGDDEDWEEDD 936
+ ++ D +D+ EEDD
Sbjct: 207 GGLRGEKRKRDAEDDGEEEDD 227
>gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 3 [Homo sapiens]
Length = 220
Score = 46.2 bits (108), Expect = 2e-04
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 879 HAEHENDSDDDDEAEDDDETE---ELGSDEDDIDEDGQEYLEILAKQAGEDGDD---EDW 932
+ E E + +++DE ED+DE E ELG E+++ G YL Q ED DD E
Sbjct: 136 YEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEV---GLSYLMKEEIQDEEDDDDYVEEGE 192
Query: 933 EEDDAEETALEGYSTIIDDEDNPVDE 958
EE++ EE L G D ED+ +E
Sbjct: 193 EEEEEEEGGLRGEKRKRDAEDDGEEE 218
Score = 38.9 bits (89), Expect = 0.025
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 822 LNDVDCFLGLHDRKMCVLGLCALIDMEQIPQVLNQVSGQILPAFILLFNGLKRAYACHAE 881
L+ V+ L + K L C + ++E + + ++ QI Y +
Sbjct: 55 LSTVEALQNLKNLKSLDLFNCEITNLEDYRESIFELLQQI-------------TYLDGFD 101
Query: 882 HENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETA 941
E++ D E EDD++ +E +E++ + E E ++ E+ +DED +ED+A
Sbjct: 102 QEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSEL 161
Query: 942 LEG 944
EG
Sbjct: 162 GEG 164
Score = 36.6 bits (83), Expect = 0.13
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 25/81 (30%)
Query: 881 EHENDSDDDDEAEDDDET--------EELG------------SDEDDIDEDGQEYLE--- 917
E E + +D+DE ED+DE EE+G D+DD E+G+E E
Sbjct: 140 EEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEE 199
Query: 918 --ILAKQAGEDGDDEDWEEDD 936
+ ++ D +D+ EEDD
Sbjct: 200 GGLRGEKRKRDAEDDGEEEDD 220
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 45.8 bits (107), Expect = 2e-04
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 885 DSDDDDEAEDDDETEELGSDEDDID-EDGQEYLEILAKQAGEDGDDEDWEEDDAEETALE 943
DSD + + D++E +E G DE+D D EDG+E E ++ ED D E E+DD E
Sbjct: 157 DSDAEVDGVDEEEEDEEGEDEEDEDDEDGEE--EEFDEEDDEDEDVEGDEDDDEVSEEEE 214
Query: 944 GYSTIIDDEDNPVDE 958
+ +DED DE
Sbjct: 215 EFGLDEEDEDEDEDE 229
Score = 45.1 bits (105), Expect = 4e-04
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 887 DDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGYS 946
D +D+ D + E G DE++ DE+G++ + + EDG++E+++E+D E+ +EG
Sbjct: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEED----EDDEDGEEEEFDEEDDEDEDVEG-- 202
Query: 947 TIIDDEDNPVDE 958
D++D+ V E
Sbjct: 203 ---DEDDDEVSE 211
Score = 43.9 bits (102), Expect = 8e-04
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 881 EHENDSDDDDEAEDDDETEELGSDED-DIDEDGQEYLEILAKQA---GEDGDDEDWEEDD 936
E E D++DE ++D E EE ++D D D +G E + ++++ G D +DED +ED+
Sbjct: 170 EDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDE 229
Query: 937 AEETALEGYSTIIDDEDNPVDE 958
EE +G + +D D+
Sbjct: 230 EEEEGGKGEKRKRETDDEGEDD 251
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 45.4 bits (106), Expect = 3e-04
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 878 CHAEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDA 937
C + ++DD+D+ E D+E EE +E++ D +E ++ Q G+ ED EE+D
Sbjct: 427 CPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQ----EDDEEEDE 482
Query: 938 EETALEGYSTIIDDEDNPVDEYQI 961
EE A G D + +P+ QI
Sbjct: 483 EEEAAAGK----DGDKSPMSSLQI 502
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 45.4 bits (106), Expect = 3e-04
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 878 CHAEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDA 937
C + ++DD+D+ E D+E EE +E++ D +E ++ Q G+ ED EE+D
Sbjct: 427 CPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQ----EDDEEEDE 482
Query: 938 EETALEGYSTIIDDEDNPVDEYQI 961
EE A G D + +P+ QI
Sbjct: 483 EEEAAAGK----DGDKSPMSSLQI 502
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 45.4 bits (106), Expect = 3e-04
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 878 CHAEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDA 937
C + ++DD+D+ E D+E EE +E++ D +E ++ Q G+ ED EE+D
Sbjct: 439 CPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQ----EDDEEEDE 494
Query: 938 EETALEGYSTIIDDEDNPVDEYQI 961
EE A G D + +P+ QI
Sbjct: 495 EEEAAAGK----DGDKSPMSSLQI 514
>gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens]
Length = 111
Score = 45.4 bits (106), Expect = 3e-04
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 15/76 (19%)
Query: 883 ENDSDDDDEAEDD-DETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETA 941
EN+ + + EA+++ DE EE G +E++ +E+G DG++ED +ED+ E+A
Sbjct: 40 ENEENGEQEADNEVDEEEEEGGEEEEEEEEG-------------DGEEEDGDEDEEAESA 86
Query: 942 LEGYSTIIDDEDNPVD 957
G DDED+ VD
Sbjct: 87 -TGKRAAEDDEDDDVD 101
Score = 40.4 bits (93), Expect = 0.009
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 880 AEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDED 931
A++E D ++++ E+++E EE +E+D DED +E K+A ED +D+D
Sbjct: 49 ADNEVDEEEEEGGEEEEEEEEGDGEEEDGDED-EEAESATGKRAAEDDEDDD 99
>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
Length = 1812
Score = 45.4 bits (106), Expect = 3e-04
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 876 YACHAEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEED 935
Y+ E E + ++ E ++DD E +E+D DED + ++ + ++ E+ D+E+ E+
Sbjct: 234 YSDEGEVEEEQQEEGEEDEDDVDVE---EEEDEDEDDRRTVDSIPEE--EEEDEEEEGEE 288
Query: 936 DAEETALEGYSTIIDDEDNPVD-EYQIFK 963
D E +GY I DED D E + FK
Sbjct: 289 DEEGEGDDGYEQISSDEDGIADLERETFK 317
>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
Length = 1147
Score = 45.4 bits (106), Expect = 3e-04
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 876 YACHAEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEED 935
Y+ E E + ++ E ++DD E +E+D DED + ++ + ++ E+ D+E+ E+
Sbjct: 234 YSDEGEVEEEQQEEGEEDEDDVDVE---EEEDEDEDDRRTVDSIPEE--EEEDEEEEGEE 288
Query: 936 DAEETALEGYSTIIDDEDNPVD-EYQIFK 963
D E +GY I DED D E + FK
Sbjct: 289 DEEGEGDDGYEQISSDEDGIADLERETFK 317
>gi|7662316 HIV-1 Vpr binding protein [Homo sapiens]
Length = 1507
Score = 44.7 bits (104), Expect = 5e-04
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 871 GLKRAYACHAEHENDSDDDDEAEDDDETEELGSDEDDIDE-DGQEYLEILAKQ------A 923
G +R E E+ +++ E EDDDE ++ D DD+DE D + LE ++ A
Sbjct: 1390 GRQRLAEDEDEEEDQEEEEQEEEDDDEDDD---DTDDLDELDTDQLLEAELEEDDNNENA 1446
Query: 924 GEDGDDEDWEEDDAEETALEGYSTIIDDEDNPVDE 958
GEDGD+ D+ D E L +DED+ DE
Sbjct: 1447 GEDGDN-DFSPSDEELANLLEEGEDGEDEDSDADE 1480
Score = 42.4 bits (98), Expect = 0.002
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 18/78 (23%)
Query: 881 EHENDSDDDD---------------EAEDDDETEELGSDED-DIDEDGQEYLEILAKQAG 924
E ++D DDDD E E+DD E G D D D +E +L + G
Sbjct: 1411 EEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANLL--EEG 1468
Query: 925 EDGDDEDWEEDDAEETAL 942
EDG+DED + D+ E L
Sbjct: 1469 EDGEDEDSDADEEVELIL 1486
Score = 30.8 bits (68), Expect = 6.9
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 881 EHENDSDDDDEAEDDDETEEL---GSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEED 935
E+ + D+D + D+E L G D +D D D E +E++ + D+ D E+D
Sbjct: 1444 ENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDT-DSSDNSDLEDD 1500
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 43.9 bits (102), Expect = 8e-04
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 881 EHENDSDDD-DEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEE 939
E+E+ +++ DE ED+DE E D+D++ E+ +E+ ED +DED +E++ E
Sbjct: 201 ENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEF----GLDKDEDDEDEDEDEEEEES 256
Query: 940 TALEGYSTIIDDEDN 954
E DDE++
Sbjct: 257 GKGENRKRETDDEED 271
Score = 40.4 bits (93), Expect = 0.009
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 885 DSDDDDEAEDDDETEELGSDEDDID-EDGQEYLEILAKQAGEDGDDE--DWEEDDAEETA 941
DSD + D +E +E G DE D + EDG+E E L ++ ED D E D +++ +EE
Sbjct: 177 DSDAQVDGVDKEEEDEEGEDEKDXENEDGEE--EELDEEEDEDEDVEGDDDKDEVSEEEE 234
Query: 942 LEGYSTIIDDEDNPVDE 958
G DDED DE
Sbjct: 235 EFGLDKDEDDEDEDEDE 251
Score = 39.3 bits (90), Expect = 0.019
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 887 DDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGYS 946
D +D+ D + + G D+++ DE+G++ + EDG++E+ +E++ E+ +EG
Sbjct: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKD----XENEDGEEEELDEEEDEDEDVEG-- 222
Query: 947 TIIDDEDNPVDEYQIF 962
DD+D +E + F
Sbjct: 223 --DDDKDEVSEEEEEF 236
>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 43.9 bits (102), Expect = 8e-04
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 881 EHENDSDDD-DEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEE 939
E+E+ +++ DE ED+DE E D+D++ E+ +E+ ED +DED +E++ E
Sbjct: 201 ENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEF----GLDKDEDDEDEDEDEEEEES 256
Query: 940 TALEGYSTIIDDEDN 954
E DDE++
Sbjct: 257 GKGENRKRETDDEED 271
Score = 40.4 bits (93), Expect = 0.009
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 885 DSDDDDEAEDDDETEELGSDEDDID-EDGQEYLEILAKQAGEDGDDE--DWEEDDAEETA 941
DSD + D +E +E G DE D + EDG+E E L ++ ED D E D +++ +EE
Sbjct: 177 DSDAQVDGVDKEEEDEEGEDEKDXENEDGEE--EELDEEEDEDEDVEGDDDKDEVSEEEE 234
Query: 942 LEGYSTIIDDEDNPVDE 958
G DDED DE
Sbjct: 235 EFGLDKDEDDEDEDEDE 251
Score = 39.3 bits (90), Expect = 0.019
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 887 DDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGYS 946
D +D+ D + + G D+++ DE+G++ + EDG++E+ +E++ E+ +EG
Sbjct: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKD----XENEDGEEEELDEEEDEDEDVEG-- 222
Query: 947 TIIDDEDNPVDEYQIF 962
DD+D +E + F
Sbjct: 223 --DDDKDEVSEEEEEF 236
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 43.5 bits (101), Expect = 0.001
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 873 KRAYACHAEHENDSDDDDEAEDDDETEELGSDEDD--IDEDGQEYLEILAKQAGEDGDDE 930
+R A E++S+++ E+E++ ETEE DE D +ED +E +E + E+ + E
Sbjct: 88 EREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQE 147
Query: 931 DWEEDDAEETALE 943
+ E + ET E
Sbjct: 148 EGESEAEGETEAE 160
Score = 35.4 bits (80), Expect = 0.28
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 881 EHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWE-EDDAEE 939
E E++ + D+E+E+D E E E + +ED QE E A+ E + D E E +AE
Sbjct: 114 EEESEDESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAEGETEAESEFDPEIEMEAER 173
Query: 940 TA 941
A
Sbjct: 174 VA 175
Score = 33.5 bits (75), Expect = 1.1
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 874 RAYACHAEHENDSDDDDEA--EDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDED 931
+A+ A+ E ++ E E + E E +E + +E+ + E ++ ED DE+
Sbjct: 65 QAWTPPADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEE 124
Query: 932 WEEDDAEETALEGYSTIIDDEDN 954
EED EE E S +EDN
Sbjct: 125 SEEDSEEEMEDEQESEA--EEDN 145
Score = 33.1 bits (74), Expect = 1.4
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 880 AEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEE 939
+E E +S+ ++E+ED+ + EE D ++ ED QE +A ED +E E + E
Sbjct: 105 SESEEESETEEESEDESD-EESEEDSEEEMEDEQE------SEAEEDNQEEGESEAEGET 157
Query: 940 TALEGYSTIIDDE 952
A + I+ E
Sbjct: 158 EAESEFDPEIEME 170
>gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens]
Length = 110
Score = 43.5 bits (101), Expect = 0.001
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 15/75 (20%)
Query: 884 NDSDDDDEAEDD-DETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETAL 942
N+ + + EA+++ DE EE G +E++ +E+G DG++ED +ED+ E+A
Sbjct: 40 NEENGEQEADNEVDEEEEEGGEEEEEEEEG-------------DGEEEDGDEDEEAESA- 85
Query: 943 EGYSTIIDDEDNPVD 957
G DDED+ VD
Sbjct: 86 TGKRAAEDDEDDDVD 100
Score = 40.4 bits (93), Expect = 0.009
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 880 AEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDED 931
A++E D ++++ E+++E EE +E+D DED +E K+A ED +D+D
Sbjct: 48 ADNEVDEEEEEGGEEEEEEEEGDGEEEDGDED-EEAESATGKRAAEDDEDDD 98
>gi|113420848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 43.1 bits (100), Expect = 0.001
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 867 LLFNGLKRAYACHAEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGED 926
++ LK E EN D ++E E +D++ +DE+G+E E ++ D
Sbjct: 12 IIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKE-VDEEGEESGEEEEEEKEGD 70
Query: 927 GDDEDWEEDDAEETALEGYSTIIDDEDNPVD 957
G++ED +E++AE G DDED+ VD
Sbjct: 71 GEEEDGDEEEAESAT--GKRAAEDDEDDDVD 99
>gi|41406057 amyloid beta A4 protein isoform c precursor [Homo
sapiens]
Length = 695
Score = 42.7 bits (99), Expect = 0.002
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 859 GQILPAFILLFNGLKRAYACHAEHENDSDDDDEAEDDDETEELGSDEDDID--------- 909
G +LP I F G++ AE ++ D D EDD + G+D D D
Sbjct: 169 GMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVVEV 228
Query: 910 EDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGY 945
+ +E E+ ++A +D DDED D+ EE A E Y
Sbjct: 229 AEEEEVAEVEEEEADDDEDDED--GDEVEEEAEEPY 262
>gi|41406055 amyloid beta A4 protein isoform b precursor [Homo
sapiens]
Length = 751
Score = 42.7 bits (99), Expect = 0.002
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 859 GQILPAFILLFNGLKRAYACHAEHENDSDDDDEAEDDDETEELGSDEDDID--------- 909
G +LP I F G++ AE ++ D D EDD + G+D D D
Sbjct: 169 GMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVVEV 228
Query: 910 EDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGY 945
+ +E E+ ++A +D DDED D+ EE A E Y
Sbjct: 229 AEEEEVAEVEEEEADDDEDDED--GDEVEEEAEEPY 262
>gi|4502167 amyloid beta A4 protein isoform a precursor [Homo
sapiens]
Length = 770
Score = 42.7 bits (99), Expect = 0.002
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 859 GQILPAFILLFNGLKRAYACHAEHENDSDDDDEAEDDDETEELGSDEDDID--------- 909
G +LP I F G++ AE ++ D D EDD + G+D D D
Sbjct: 169 GMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVVEV 228
Query: 910 EDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGY 945
+ +E E+ ++A +D DDED D+ EE A E Y
Sbjct: 229 AEEEEVAEVEEEEADDDEDDED--GDEVEEEAEEPY 262
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,690,680
Number of Sequences: 37866
Number of extensions: 1752566
Number of successful extensions: 12528
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 7974
Number of HSP's gapped (non-prelim): 2401
length of query: 1038
length of database: 18,247,518
effective HSP length: 112
effective length of query: 926
effective length of database: 14,006,526
effective search space: 12970043076
effective search space used: 12970043076
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.