Search of human proteins with 5453838

Search of human proteins with 5453838

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5453838 Sjogren syndrome/scleroderma autoantigen 1 [Homo
sapiens]
         (199 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5453838 Sjogren syndrome/scleroderma autoantigen 1 [Homo sapi...   402   e-112
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]       42   3e-04
gi|148612811 ubiquitin specific protease 43 [Homo sapiens]             37   0.008
gi|13699803 WAS protein family, member 3 [Homo sapiens]                35   0.032
gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo ...    34   0.072
gi|45120115 hypothetical protein LOC56905 [Homo sapiens]               33   0.12 
gi|118498339 EMI domain containing 2 [Homo sapiens]                    33   0.12 
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap...    33   0.16 
gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap...    33   0.16 
gi|11560152 zinc finger protein 335 [Homo sapiens]                     33   0.21 
gi|24497589 aristaless related homeobox [Homo sapiens]                 33   0.21 
gi|4502193 v-raf murine sarcoma 3611 viral oncogene homolog [Hom...    33   0.21 
gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]    33   0.21 
gi|24497513 homeobox A3 isoform a [Homo sapiens]                       32   0.27 
gi|13562112 homeobox A3 isoform a [Homo sapiens]                       32   0.27 
gi|5174711 T-box 1 isoform B [Homo sapiens]                            32   0.27 
gi|18104952 T-box 1 isoform C [Homo sapiens]                           32   0.27 
gi|18104950 T-box 1 isoform A [Homo sapiens]                           32   0.27 
gi|226371725 FCH domain only 2 isoform b [Homo sapiens]                32   0.27 
gi|226371723 FCH domain only 2 isoform a [Homo sapiens]                32   0.27 
gi|209977097 tripartite motif-containing 66 [Homo sapiens]             32   0.27 
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]         32   0.27 
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]       32   0.36 
gi|145699133 KPL2 protein isoform 1 [Homo sapiens]                     32   0.36 
gi|222446607 SH3 domain containing ring finger 2 [Homo sapiens]        32   0.36 
gi|149773456 hypothetical protein LOC643314 [Homo sapiens]             32   0.47 
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]                   32   0.47 
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]         32   0.47 
gi|119395716 forkhead box C1 [Homo sapiens]                            32   0.47 
gi|56549696 E1A binding protein p400 [Homo sapiens]                    32   0.47 

>gi|5453838 Sjogren syndrome/scleroderma autoantigen 1 [Homo
           sapiens]
          Length = 199

 Score =  402 bits (1033), Expect = e-112
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MALNGAEVDDFSWEPPTEAETKVLQARRERQDRISRLMGDYLLRGYRMLGETCADCGTIL 60
           MALNGAEVDDFSWEPPTEAETKVLQARRERQDRISRLMGDYLLRGYRMLGETCADCGTIL
Sbjct: 1   MALNGAEVDDFSWEPPTEAETKVLQARRERQDRISRLMGDYLLRGYRMLGETCADCGTIL 60

Query: 61  LQDKQRKIYCVACQELDSDVDKDNPALNAQAALSQAREHQLASASELPLGSRPAPQPPVP 120
           LQDKQRKIYCVACQELDSDVDKDNPALNAQAALSQAREHQLASASELPLGSRPAPQPPVP
Sbjct: 61  LQDKQRKIYCVACQELDSDVDKDNPALNAQAALSQAREHQLASASELPLGSRPAPQPPVP 120

Query: 121 RPEHCEGAAAGLKAAQGPPAPAVPPNTDVMACTQTALLQKLTWASAELGSSTSLETSIQL 180
           RPEHCEGAAAGLKAAQGPPAPAVPPNTDVMACTQTALLQKLTWASAELGSSTSLETSIQL
Sbjct: 121 RPEHCEGAAAGLKAAQGPPAPAVPPNTDVMACTQTALLQKLTWASAELGSSTSLETSIQL 180

Query: 181 CGLIRACAEALRSLQQLQH 199
           CGLIRACAEALRSLQQLQH
Sbjct: 181 CGLIRACAEALRSLQQLQH 199


>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
          Length = 825

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 9/135 (6%)

Query: 61  LQDKQRKIYCVACQELDSDVDKDNPALNAQAALSQAREHQLASASELPLGSRPAP-QPPV 119
           L++   K+     +E  +DV    P L  +A   +ARE QL++A E P    P   Q P+
Sbjct: 405 LEEAPAKVEPPTVEETLADVQ---PLLPEEAPREEARELQLSTAMETPAEEAPTEFQSPL 461

Query: 120 PRPEHCEGAAAGLK--AAQGPPAPAVPPNTDVMACTQTALLQKLTWASAELGSSTSLE-- 175
           P+    E A+A ++  AA  PPA   P         +T+  +      + L   T+ E  
Sbjct: 462 PKETTAEEASAEIQLLAATEPPADETPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEA 521

Query: 176 -TSIQLCGLIRACAE 189
              IQL   I A A+
Sbjct: 522 SAEIQLLAAIEAPAD 536


>gi|148612811 ubiquitin specific protease 43 [Homo sapiens]
          Length = 1123

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 100 QLASASELPLGSR--PAPQPPVPRPEHCEGAAAGLKAAQGPPAPAVP 144
           +L S   L LGSR  P   PP P+P HC+G   G  A    P PA P
Sbjct: 26  RLFSRFLLALGSRSRPGDSPPRPQPGHCDGDGEGGFACAPGPVPAAP 72


>gi|13699803 WAS protein family, member 3 [Homo sapiens]
          Length = 502

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 19/86 (22%)

Query: 94  SQAREHQL----ASASELPLGSRPAPQPPVPRPEHCEGAAA---------GLKAAQ---- 136
           SQA EH+     ASA  + L +RP   PP P P+  EG+ A         G+  AQ    
Sbjct: 279 SQAAEHEYRPPSASARHMAL-NRPQQPPPPPPPQAPEGSQASAPMAPADYGMLPAQIIEY 337

Query: 137 -GPPAPAVPPNTDVMACTQTALLQKL 161
             P  P  PP   V+   QTA +  L
Sbjct: 338 YNPSGPPPPPPPPVIPSAQTAFVSPL 363


>gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo
           sapiens]
          Length = 319

 Score = 34.3 bits (77), Expect = 0.072
 Identities = 36/130 (27%), Positives = 48/130 (36%), Gaps = 39/130 (30%)

Query: 20  ETKVLQARRERQDRISRLMGDYLLRGYRMLGETCADCGTILLQDKQRKIYCVACQELDSD 79
           E K+ +    RQ RI R    + +RGYR L E  +D                     +SD
Sbjct: 155 EQKLRRGVAPRQPRIPR--PQHKVRGYRYLEEDNSD---------------------ESD 191

Query: 80  VDKDNPALNAQAALSQAREHQLASASELPLGSRPAPQPPV----PRPEHCEGAAAGLKAA 135
            + D         L    E   A A   P G RP P+P      P P      A G +++
Sbjct: 192 AEGD---------LGDGEE---AEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSS 239

Query: 136 QGPPAPAVPP 145
           +GPP P   P
Sbjct: 240 EGPPGPRTQP 249


>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
          Length = 1047

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 101  LASASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAPAV---PPNTDVMA 151
            LA  S  P   +P  +PP P PE  E AAAG ++    P PA    PP   + A
Sbjct: 952  LAQKSPAPKVRKPGRKPPTPGPEKAE-AAAGEESCGASPTPATSASPPGPTLKA 1004


>gi|118498339 EMI domain containing 2 [Homo sapiens]
          Length = 439

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 15/91 (16%)

Query: 70  CVACQELDSDVDKDNPALNAQAALSQAREHQLASASELPLGSRPAPQ------------- 116
           C+ C  L SD+ +    L A+  L +A E   +  ++LP      P              
Sbjct: 128 CMNCTRL-SDMSERLTTLEAKVLLLEAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLA 186

Query: 117 PPVPRPEHCEGAAAGLKAAQGPPAPAVPPNT 147
            PVPR     G A G     GPP PA PP +
Sbjct: 187 HPVPRQRRPTGPA-GPPGQTGPPGPAGPPGS 216


>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo
           sapiens]
          Length = 1747

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 74  QELDSDVDKDNPALNAQAALSQAREHQLASASELPLGSRPAPQPPVPRPEHCEGAAAGLK 133
           +E D D D D  +  +     +A + +++     P G   AP PP   P  C    A   
Sbjct: 407 EEKDRDRDADQESNISGPLAGRAGQSKISDPGPGPGGVGGAPLPPPGAPRSCIRIRARFP 466

Query: 134 AAQGPPAPAVPP 145
           A   PPAP  PP
Sbjct: 467 A---PPAPPAPP 475


>gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo
           sapiens]
          Length = 735

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)

Query: 112 RPAPQPPVPRPEHCEGAAAGLKAAQGPPAP 141
           RP P PP P P+  EG+ AG   A+GP +P
Sbjct: 35  RPEPSPPEPEPQAPEGSQAG---AEGPSSP 61



 Score = 28.1 bits (61), Expect = 5.1
 Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 4/33 (12%)

Query: 113 PAPQPPVPRPEHCEGAAAGLKAAQGPPAPAVPP 145
           PAP+PP P+P   E  + GL A QG  APA PP
Sbjct: 123 PAPEPPGPQPGSAE--SEGL-APQG-AAPASPP 151


>gi|11560152 zinc finger protein 335 [Homo sapiens]
          Length = 1342

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 13/71 (18%)

Query: 87   LNAQAALSQAREHQLASASELPLGS-----RPAPQPPVPRPEHCEGAAAGLKAAQGPPAP 141
            L A  ++S      LAS ++ PL       R  P+PP P   HC G +    +A  PPA 
Sbjct: 939  LTADGSISFPSPDALASGAKWPLLQCGGLPRDGPEPPSPAKTHCVGDSQ--SSASSPPAT 996

Query: 142  ------AVPPN 146
                  AVPP+
Sbjct: 997  SKALGLAVPPS 1007


>gi|24497589 aristaless related homeobox [Homo sapiens]
          Length = 562

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 89  AQAALSQAREHQLASASELPLGSRPAPQPPVPRP-EHCEGAAAGLKAAQGPPA 140
           A AA + A     A+A+  P G  P P PP  RP E  +GA A   AA    A
Sbjct: 102 AAAAAAAAAAAAAATATAGPRGEAPPPPPPTARPGERPDGAGAAAAAAAAAAA 154


>gi|4502193 v-raf murine sarcoma 3611 viral oncogene homolog [Homo
           sapiens]
          Length = 606

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 41  YLLRGYRMLGETCADCGTILLQDKQRKIYCVACQELDSDVDKDNPALNAQAALSQAREHQ 100
           +L  G+R     C  CG    Q    K+  V    +D   ++     + Q     +R+H+
Sbjct: 118 FLFHGFR-----CQTCGYKFHQHCSSKVPTVC---VDMSTNRQQFYHSVQDLSGGSRQHE 169

Query: 101 LASASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAPAV----PPNTDVMACT 153
             + S  PL     PQ P PR +HC+       A    P   +     PN  +++ T
Sbjct: 170 --APSNRPLNELLTPQGPSPRTQHCDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTT 224


>gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]
          Length = 955

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 86  ALNAQAALSQAREHQLASASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGP-PAPAVP 144
           A+ A +A+ Q R+H       LP   RPA  P    P    G  AG++  + P P P +P
Sbjct: 267 AVLAPSAILQPRQHPSKMLLLLPEAGRPALSPGHSPPSGAPGPPAGVRTTRLPSPTPRLP 326

Query: 145 PNT 147
            ++
Sbjct: 327 TSS 329



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 16/38 (42%), Positives = 19/38 (50%)

Query: 104 ASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAP 141
           A  LPL S  APQPP   PE    A+     ++ PP P
Sbjct: 854 APTLPLASPGAPQPPPVTPERSFSASGAQIVSRWPPLP 891


>gi|24497513 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 108 PLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAPAVPP 145
           P  + PAPQPP P P+      A   AA  PP+ A PP
Sbjct: 95  PQAAPPAPQPPQPAPQ----PPAPTPAAPPPPSSASPP 128


>gi|13562112 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 108 PLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAPAVPP 145
           P  + PAPQPP P P+      A   AA  PP+ A PP
Sbjct: 95  PQAAPPAPQPPQPAPQ----PPAPTPAAPPPPSSASPP 128


>gi|5174711 T-box 1 isoform B [Homo sapiens]
          Length = 372

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 102 ASASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAP--AVPPNTDVMACTQTALLQ 159
           AS    P G R  P PP PR + C  AA G   A GPP P  A P      A T  A   
Sbjct: 31  ASPGADPYGPREPPPPP-PRYDPCAAAAPG---APGPPPPPHAYPFAPAAGAATSAAAEP 86

Query: 160 KLTWASAELGSSTSLETSIQLCGL 183
           +   AS    +   ++ + ++ G+
Sbjct: 87  EGPGASCAAAAKAPVKKNAKVAGV 110


>gi|18104952 T-box 1 isoform C [Homo sapiens]
          Length = 495

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 102 ASASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAP--AVPPNTDVMACTQTALLQ 159
           AS    P G R  P PP PR + C  AA G   A GPP P  A P      A T  A   
Sbjct: 31  ASPGADPYGPREPPPPP-PRYDPCAAAAPG---APGPPPPPHAYPFAPAAGAATSAAAEP 86

Query: 160 KLTWASAELGSSTSLETSIQLCGL 183
           +   AS    +   ++ + ++ G+
Sbjct: 87  EGPGASCAAAAKAPVKKNAKVAGV 110


>gi|18104950 T-box 1 isoform A [Homo sapiens]
          Length = 398

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 102 ASASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAP--AVPPNTDVMACTQTALLQ 159
           AS    P G R  P PP PR + C  AA G   A GPP P  A P      A T  A   
Sbjct: 31  ASPGADPYGPREPPPPP-PRYDPCAAAAPG---APGPPPPPHAYPFAPAAGAATSAAAEP 86

Query: 160 KLTWASAELGSSTSLETSIQLCGL 183
           +   AS    +   ++ + ++ G+
Sbjct: 87  EGPGASCAAAAKAPVKKNAKVAGV 110


>gi|226371725 FCH domain only 2 isoform b [Homo sapiens]
          Length = 777

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query: 85  PALNAQAALSQAREHQLASASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAPAVP 144
           P+L++ ++ S          + L +G+   P  P  RP+   G  +G+     P +P V 
Sbjct: 400 PSLDSSSSSSLTSSSSARPTTPLSVGTIVPPPRPASRPKLTSGKLSGINEIPRPFSPPVT 459

Query: 145 PNTDVMACTQTALLQKLTWASAELGSSTSLETS 177
            NT        A  +    +S+ + SS SL  +
Sbjct: 460 SNTSPPPAAPLARAE----SSSSISSSASLSAA 488


>gi|226371723 FCH domain only 2 isoform a [Homo sapiens]
          Length = 810

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query: 85  PALNAQAALSQAREHQLASASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAPAVP 144
           P+L++ ++ S          + L +G+   P  P  RP+   G  +G+     P +P V 
Sbjct: 433 PSLDSSSSSSLTSSSSARPTTPLSVGTIVPPPRPASRPKLTSGKLSGINEIPRPFSPPVT 492

Query: 145 PNTDVMACTQTALLQKLTWASAELGSSTSLETS 177
            NT        A  +    +S+ + SS SL  +
Sbjct: 493 SNTSPPPAAPLARAE----SSSSISSSASLSAA 521


>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
          Length = 1216

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 6/105 (5%)

Query: 94  SQAREHQLASASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAP-AVPPNTDVMAC 152
           SQ++E  L +  E P      P  P+ +       AA L  A G   P +VPP    +  
Sbjct: 563 SQSQEETLQATDEPPASQGSKPALPLDK-----NTAAALPQASGEETPLSVPPVDSTIQH 617

Query: 153 TQTALLQKLTWASAELGSSTSLETSIQLCGLIRACAEALRSLQQL 197
           +   +++K + + + +G S +LE  +    L R     ++S+  L
Sbjct: 618 SSPNVVRKHSTSLSIMGFSNTLEMELSSTRLERPLEPQIQSVSNL 662



 Score = 28.1 bits (61), Expect = 5.1
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 108 PLGSRPAPQPPVPRPEHCEGAAAGLKAA---QGPPAPAVPPNTDVM 150
           PL   P P PP P+  H     +   A+   + PP PA   N D+M
Sbjct: 463 PLPHPPPPLPPPPQQPHPPLPPSQHLASSQHESPPGPACSQNMDIM 508


>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
          Length = 948

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 42/159 (26%), Positives = 60/159 (37%), Gaps = 24/159 (15%)

Query: 43  LRGYRMLGETCADCGTILLQDKQRKIYC---VACQELDSDVDKDN--PALNAQAALSQAR 97
           L+GY  LG  C    T+L  D  R+  C     CQ L     + +   A +     S A 
Sbjct: 760 LKGYCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDAT 819

Query: 98  EHQLASASELP----LGSRPAPQPP---------VPRPEHCEGAAA---GLKAAQGPPAP 141
                SAS  P       RP  Q P         V  P HC G +A     KA+    + 
Sbjct: 820 ARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSASPSSSKASSSSSSS 879

Query: 142 AVPP---NTDVMACTQTALLQKLTWASAELGSSTSLETS 177
           + PP   + +  +  + AL    +    +L S  SL++S
Sbjct: 880 SSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSS 918


>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
          Length = 1838

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 117  PPVPRPEHCEGAAAGLKAAQGPPAPAVPPNTD 148
            PP P+ E  E   +G   A GPP P  PP  D
Sbjct: 1301 PPGPKGERGEKGESGPSGAAGPPGPKGPPGDD 1332



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 108  PLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAPAVPPNTD 148
            P+G R  P PP P  E      AG +  +G P PA  P  D
Sbjct: 1010 PMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKD 1050



 Score = 31.2 bits (69), Expect = 0.61
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 89  AQAALSQAREHQLASASELPLGSRPAPQPPVP----RPEHCEGAAAGLKAAQGPPAPAVP 144
           AQA L QAR      A  + L  RP P  P      + E  +    G +  QGPP PA  
Sbjct: 546 AQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGK 605

Query: 145 P 145
           P
Sbjct: 606 P 606


>gi|145699133 KPL2 protein isoform 1 [Homo sapiens]
          Length = 1822

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 76  LDSDVDKDNPALNAQAALSQAREHQLASASELPLGSRPAPQPPVPRPE---HCEGAAAGL 132
           L +++ K    +  +    +A +   AS +ELPL + P   PP P  E   H    A+  
Sbjct: 878 LTTEIAKKKNKVEKKLEEKEAEKKAAASLAELPLPTPPPAPPPEPEKEKEIHQSHVASKT 937

Query: 133 KAAQGPPAPAVP 144
             A+G P    P
Sbjct: 938 PTAKGKPQSEAP 949


>gi|222446607 SH3 domain containing ring finger 2 [Homo sapiens]
          Length = 729

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)

Query: 85  PALNAQAALSQAREHQLASA-----SELPLGSRPAPQPPVPRP 122
           PAL   +  S+AR H  AS+      E+P+ S P P+PP   P
Sbjct: 580 PALTCISRGSEARIHSAASSLIMEDKEIPIKSEPLPKPPASAP 622


>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
          Length = 1427

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 4/93 (4%)

Query: 91   AALSQAREHQLASASELPLGSRPA-PQPPVPRPEHCEGAAAGLKAAQ--GPPAPAVP-PN 146
            AA     E   + A+ +P    PA P P VP PE    AA  +   +    PA AVP P 
Sbjct: 1121 AAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPA 1180

Query: 147  TDVMACTQTALLQKLTWASAELGSSTSLETSIQ 179
                     A L++ T  +A + +  ++  +++
Sbjct: 1181 ESASFAAVVATLEEPTSPAASVPTPAAMVATLE 1213



 Score = 30.8 bits (68), Expect = 0.79
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 91   AALSQAREHQLASASELPLGSRPA-PQPPVPRPEHCEGAAAGLKAAQGP--PAPAVP 144
            AA     E   + A+ +P    PA P   VP PE     AA +   + P  PAPAVP
Sbjct: 1095 AAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVP 1151


>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
          Length = 457

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 25/70 (35%), Positives = 28/70 (40%), Gaps = 5/70 (7%)

Query: 86  ALNAQAALSQAREHQLASASELPLGSRPAPQPPVPRPEHCEGAAAGLK----AAQGPPAP 141
           A  AQA+ +Q  E     ASE P G+        P  EH  G    LK    AA  PP P
Sbjct: 277 AAGAQASQAQLGE-AAGPASETPAGTESPHSSASPCQEHKRGGLGELKGTPAAALSPPEP 335

Query: 142 AVPPNTDVMA 151
           A  P     A
Sbjct: 336 APSPGQQQQA 345


>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
          Length = 1909

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 21/111 (18%)

Query: 77  DSDVDKDNPALNAQAALSQAREHQLASASELPLGSRPAP--------QPPVPRPEHC-EG 127
           D  + K +  L   + +   R+      S+ P GSR  P        +PP  R EHC  G
Sbjct: 862 DPHIPKHSAQLPHSSRMPSRRDWVQCPKSQTP-GSRSRPAIESSDSGEPPT-RDEHCGSG 919

Query: 128 AAAGLKAAQGPPAPAVPPNTDVMACTQTALLQKLTWASAELGSSTSLETSI 178
             AG+K+   PP    PP   V      +LL + ++  +   SST  ET +
Sbjct: 920 PEAGVKSPSPPP----PPGRSV------SLLARPSYDYSPAPSSTKSETRV 960


>gi|119395716 forkhead box C1 [Homo sapiens]
          Length = 553

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)

Query: 102 ASASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAPAVPP 145
           +S+S L  GS P    P  RP   +GA     +A  PPAP+ PP
Sbjct: 262 SSSSSLSSGSSPPGSLPSARPLSLDGA----DSAPPPPAPSAPP 301


>gi|56549696 E1A binding protein p400 [Homo sapiens]
          Length = 3122

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 20/60 (33%), Positives = 25/60 (41%)

Query: 86   ALNAQAALSQAREHQLASASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAPAVPP 145
            A   +A   Q +  Q A A   P   +P P P  P P   +  AAG +   GPPA    P
Sbjct: 2486 AKEKKALADQQKAQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQP 2545


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.129    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,554,639
Number of Sequences: 37866
Number of extensions: 439521
Number of successful extensions: 4907
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 241
Number of HSP's that attempted gapping in prelim test: 4116
Number of HSP's gapped (non-prelim): 1002
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.