Guide to the Human Genome
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Name: TUBGCP3 Sequence: fasta or formatted (907aa) NCBI GI: 5453660
Description:

tubulin, gamma complex associated protein 3

Referenced in:

Spindle, M phase, and Meiosis
Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         64           2
 C cysteine            1.5         14           2
 D aspartate           5.6         51           2
 E glutamate           6.0         54           5
 F phenylalanine       3.7         34           2
 G glycine             5.0         45           2
 H histidine           3.2         29           1
 I isoleucine          4.5         41           2
 K lysine              4.5         41           3
 L leucine            12.8        116           3
 M methionine          2.1         19           1
 N asparagine          3.0         27           2
 P proline             3.4         31           1
 Q glutamine           6.2         56           2
 R arginine            7.6         69           2
 S serine              8.3         75           2
 T threonine           5.4         49           2
 V valine              5.4         49           1
 W tryptophan          1.2         11           1
 Y tyrosine            3.5         32           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin, gamma complex associated protein 3 
TUBGCP2               0.102   tubulin, gamma complex associated protein 2 
TUBGCP4               0.039   tubulin, gamma complex associated protein 4 
TUBGCP6               0.036   tubulin, gamma complex associated protein 6 
TUBGCP5               0.031   tubulin, gamma complex associated protein 5 isoform...
TUBGCP5               0.031   tubulin, gamma complex associated protein 5 isoform...
CSRNP2                0.006   TGF-beta induced apoptosis protein 12 
KIAA1407              0.006   hypothetical protein LOC57577 
EIF3A                 0.004   eukaryotic translation initiation factor 3, subunit 1...
RNF139                0.004   ring finger protein 139 
INTS12                0.004   integrator complex subunit 12 
INTS12                0.004   integrator complex subunit 12 
FAM186A               0.004   family with sequence similarity 186, member A [Homo...
LAMA4                 0.004   laminin, alpha 4 isoform 2 precursor 
LAMA4                 0.004   laminin, alpha 4 isoform 1 precursor 
LAMA4                 0.004   laminin, alpha 4 isoform 2 precursor 
RSPH3                 0.004   radial spoke 3 homolog 
BRD2                  0.004   bromodomain containing 2 
BRD2                  0.004   bromodomain containing 2 
CCPG1                 0.004   cell cycle progression 1 isoform 2 
CCPG1                 0.004   cell cycle progression 1 isoform 1 
GIGYF2                0.004   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.004   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.004   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.004   GRB10 interacting GYF protein 2 isoform b 
ABI1                  0.004   abl-interactor 1 isoform d 
ABI1                  0.004   abl-interactor 1 isoform c 
ABI1                  0.004   abl-interactor 1 isoform b 
TBC1D15               0.004   TBC1 domain family, member 15 isoform 2 
TBC1D15               0.004   TBC1 domain family, member 15 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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