Guide to the Human Genome
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Name: NFKBIZ Sequence: fasta or formatted (618aa) NCBI GI: 53832024
Description:

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta isoform b

Referenced in:

NF-kappaB Pathway
T cells

Other entries for this name:
alt prot [718aa] nuclear factor of kappa light polypeptide gene enhancer in B-cell...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         47           2
 C cysteine            1.8         11           1
 D aspartate           4.2         26           2
 E glutamate           5.5         34           2
 F phenylalanine       3.1         19           1
 G glycine             5.5         34           2
 H histidine           3.9         24           1
 I isoleucine          3.4         21           2
 K lysine              4.7         29           1
 L leucine             9.7         60           3
 M methionine          2.3         14           2
 N asparagine          5.8         36           1
 P proline             6.8         42           2
 Q glutamine          10.0         62           3
 R arginine            3.9         24           2
 S serine              8.7         54           3
 T threonine           3.7         23           2
 V valine              7.1         44           3
 W tryptophan          0.5          3           1
 Y tyrosine            1.8         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear factor of kappa light polypeptide gene enhan... 
NFKBIZ                1.000   nuclear factor of kappa light polypeptide gene enhan...
NFKBID                0.148   nuclear factor of kappa light polypeptide gene enhan...
BCL3                  0.072   B-cell CLL/lymphoma 3 
NFKB2                 0.062   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.062   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.062   nuclear factor of kappa light polypeptide gene enha...
NFKB1                 0.057   nuclear factor kappa-B, subunit 1 
NFKBIE                0.054   nuclear factor of kappa light polypeptide gene enhan...
NFKBIA                0.053   nuclear factor of kappa light polypeptide gene enhan...
ANK1                  0.047   ankyrin 1 isoform 9 
ANK1                  0.047   ankyrin 1 isoform 1 
ANK1                  0.047   ankyrin 1 isoform 3 
ANK1                  0.047   ankyrin 1 isoform 2 
ANK1                  0.047   ankyrin 1 isoform 4 
ANK2                  0.044   ankyrin 2 isoform 3 
ANK2                  0.044   ankyrin 2 isoform 2 
ANK2                  0.044   ankyrin 2 isoform 1 
ANK3                  0.043   ankyrin 3 isoform 1 
ANKRD6                0.042   ankyrin repeat domain 6 
ANKK1                 0.041   ankyrin repeat and kinase domain containing 1 
PSMD10                0.040   proteasome 26S non-ATPase subunit 10 isoform 1 
TNKS2                 0.039   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKRD28               0.038   ankyrin repeat domain 28 
RIPK4                 0.038   ankyrin repeat domain 3 
ANKRD52               0.036   ankyrin repeat domain 52 
TNKS                  0.036   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKDD1A               0.035   ankyrin repeat and death domain containing 1A 
DAPK1                 0.034   death-associated protein kinase 1 
PPP1R12C              0.034   protein phosphatase 1, regulatory subunit 12C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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