Guide to the Human Genome
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Name: NFKBID Sequence: fasta or formatted (313aa) NCBI GI: 41281709
Description:

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta

Referenced in:

NF-kappaB Pathway
T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.1         44           4
 C cysteine            0.6          2           1
 D aspartate           3.8         12           1
 E glutamate           5.1         16           2
 F phenylalanine       1.3          4           1
 G glycine             7.0         22           1
 H histidine           4.2         13           1
 I isoleucine          1.6          5           1
 K lysine              1.9          6           1
 L leucine            16.6         52           3
 M methionine          2.2          7           1
 N asparagine          3.8         12           1
 P proline             8.9         28           2
 Q glutamine           5.1         16           2
 R arginine            6.7         21           2
 S serine              3.8         12           2
 T threonine           3.8         12           1
 V valine              7.7         24           2
 W tryptophan          0.6          2           1
 Y tyrosine            1.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear factor of kappa light polypeptide gene enhan... 
NFKBIZ                0.304   nuclear factor of kappa light polypeptide gene enhan...
NFKBIZ                0.304   nuclear factor of kappa light polypeptide gene enhan...
BCL3                  0.136   B-cell CLL/lymphoma 3 
NFKB2                 0.128   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.128   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.128   nuclear factor of kappa light polypeptide gene enha...
NFKB1                 0.108   nuclear factor kappa-B, subunit 1 
NFKBIE                0.101   nuclear factor of kappa light polypeptide gene enhan...
ANKRD52               0.087   ankyrin repeat domain 52 
ANKRD44               0.082   ankyrin repeat domain 44 
NFKBIA                0.074   nuclear factor of kappa light polypeptide gene enhan...
ANKK1                 0.074   ankyrin repeat and kinase domain containing 1 
ANKRD28               0.074   ankyrin repeat domain 28 
ANK1                  0.074   ankyrin 1 isoform 9 
ANK1                  0.074   ankyrin 1 isoform 1 
ANK1                  0.074   ankyrin 1 isoform 3 
ANK1                  0.074   ankyrin 1 isoform 2 
ANK1                  0.074   ankyrin 1 isoform 4 
ANK3                  0.071   ankyrin 3 isoform 1 
ANKFY1                0.071   ankyrin repeat and FYVE domain containing 1 isoform...
PSMD10                0.067   proteasome 26S non-ATPase subunit 10 isoform 1 
ANKDD1A               0.067   ankyrin repeat and death domain containing 1A 
ANK2                  0.066   ankyrin 2 isoform 3 
ANK2                  0.066   ankyrin 2 isoform 2 
ANK2                  0.066   ankyrin 2 isoform 1 
DAPK1                 0.066   death-associated protein kinase 1 
ANKRD6                0.066   ankyrin repeat domain 6 
LOC441869             0.066   hypothetical protein LOC441869 
KIDINS220             0.062   kinase D-interacting substrate of 220 kDa 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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