Guide to the Human Genome
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Name: BCL3 Sequence: fasta or formatted (454aa) NCBI GI: 164664508
Description:

B-cell CLL/lymphoma 3

Referenced in:

B cells
NF-kappaB Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         52           2
 C cysteine            1.5          7           1
 D aspartate           4.8         22           1
 E glutamate           2.9         13           1
 F phenylalanine       1.5          7           2
 G glycine             7.7         35           2
 H histidine           2.9         13           1
 I isoleucine          2.0          9           1
 K lysine              1.1          5           1
 L leucine            13.2         60           3
 M methionine          2.6         12           2
 N asparagine          3.5         16           2
 P proline            13.9         63           2
 Q glutamine           2.6         12           2
 R arginine            7.5         34           2
 S serine              9.0         41           3
 T threonine           4.4         20           2
 V valine              5.7         26           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.5          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   B-cell CLL/lymphoma 3 
NFKBIE                0.161   nuclear factor of kappa light polypeptide gene enhan...
NFKB2                 0.139   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.139   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.139   nuclear factor of kappa light polypeptide gene enha...
NFKB1                 0.117   nuclear factor kappa-B, subunit 1 
NFKBIZ                0.099   nuclear factor of kappa light polypeptide gene enhan...
NFKBIZ                0.099   nuclear factor of kappa light polypeptide gene enhan...
NFKBIA                0.095   nuclear factor of kappa light polypeptide gene enhan...
NFKBID                0.091   nuclear factor of kappa light polypeptide gene enhan...
ANKRD52               0.089   ankyrin repeat domain 52 
ANK2                  0.086   ankyrin 2 isoform 3 
ANK2                  0.086   ankyrin 2 isoform 2 
ANK2                  0.086   ankyrin 2 isoform 1 
ANKRD28               0.085   ankyrin repeat domain 28 
ANK1                  0.084   ankyrin 1 isoform 9 
ANK1                  0.084   ankyrin 1 isoform 1 
ANK1                  0.084   ankyrin 1 isoform 3 
ANK1                  0.084   ankyrin 1 isoform 2 
ANK1                  0.084   ankyrin 1 isoform 4 
ANKRD6                0.084   ankyrin repeat domain 6 
RAI14                 0.083   retinoic acid induced 14 isoform b 
RAI14                 0.083   retinoic acid induced 14 isoform d 
RAI14                 0.083   retinoic acid induced 14 isoform c 
RAI14                 0.083   retinoic acid induced 14 isoform a 
RAI14                 0.083   retinoic acid induced 14 isoform a 
RAI14                 0.083   retinoic acid induced 14 isoform a 
ANKRD44               0.082   ankyrin repeat domain 44 
ANK3                  0.077   ankyrin 3 isoform 1 
ANKRD50               0.077   ankyrin repeat domain 50 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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