Guide to the Human Genome
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Name: ZNF215 Sequence: fasta or formatted (517aa) NCBI GI: 93004074
Description:

zinc finger protein 215

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         18           1
 C cysteine            3.1         16           1
 D aspartate           3.9         20           1
 E glutamate           8.9         46           3
 F phenylalanine       4.4         23           2
 G glycine             3.9         20           1
 H histidine           3.9         20           1
 I isoleucine          5.0         26           2
 K lysine             10.3         53           3
 L leucine             8.1         42           2
 M methionine          2.7         14           1
 N asparagine          5.6         29           2
 P proline             3.9         20           1
 Q glutamine           4.8         25           2
 R arginine            5.2         27           2
 S serine             10.4         54           3
 T threonine           4.4         23           2
 V valine              4.1         21           3
 W tryptophan          1.7          9           1
 Y tyrosine            2.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 215 
ZNF483                0.280   zinc finger protein 483 isoform a 
ZNF287                0.269   zinc finger protein 287 
ZNF274                0.220   zinc finger protein 274 isoform c 
ZNF274                0.220   zinc finger protein 274 isoform a 
ZNF274                0.220   zinc finger protein 274 isoform b 
ZNF167                0.218   zinc finger protein 167 isoform 1 
ZNF184                0.205   zinc finger protein 184 
ZFP90                 0.199   zinc finger protein 90 
ZNF582                0.192   zinc finger protein 582 
ZNF286A               0.189   zinc finger protein 286 
ZNF286A               0.189   zinc finger protein 286 
ZNF514                0.188   zinc finger protein 514 
ZNF829                0.187   zinc finger protein 829 
ZNF713                0.185   zinc finger protein 713 
ZNF624                0.184   zinc finger protein 624 
ZNF566                0.183   zinc finger protein 566 isoform 1 
ZNF566                0.183   zinc finger protein 566 isoform 1 
ZNF566                0.183   zinc finger protein 566 isoform 1 
ZNF566                0.183   zinc finger protein 566 isoform 2 
ZNF100                0.183   zinc finger protein 100 
ZNF595                0.183   zinc finger protein 595 
ZNF333                0.182   zinc finger protein 333 
ZNF10                 0.182   zinc finger protein 10 
DKFZp686E2433         0.181   hypothetical protein LOC345462 
ZNF570                0.181   zinc finger protein 570 
ZNF431                0.181   zinc finger protein 431 
ZNF302                0.179   zinc finger protein 302 
ZNF302                0.179   zinc finger protein 302 
ZNF665                0.179   zinc finger protein 665 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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