UPK3B 3293

Name: UPK3B	Sequence: fasta or formatted (320aa)		NCBI GI: 13399330
Description: uroplakin 3B isoform a		Referenced in: Kidney
Other entries for this name: alt prot [276aa] uroplakin 3B isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.3 33 3 C cysteine 1.9 6 1 D aspartate 4.1 13 1 E glutamate 2.8 9 1 F phenylalanine 1.9 6 1 G glycine 12.2 39 3 H histidine 5.0 16 1 I isoleucine 1.2 4 1 K lysine 0.6 2 1 L leucine 13.4 43 3 M methionine 2.2 7 1 N asparagine 1.2 4 1 P proline 13.4 43 3 Q glutamine 5.6 18 2 R arginine 5.0 16 2 S serine 5.3 17 2 T threonine 5.0 16 2 V valine 4.4 14 2 W tryptophan 2.8 9 1 Y tyrosine 1.6 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 uroplakin 3B isoform a UPK3B 0.403 uroplakin 3B isoform b UPLP 0.100 uroplakin-like protein OBSCN 0.020 obscurin, cytoskeletal calmodulin and titin-interac... UPK3A 0.018 uroplakin 3A precursor ZNF526 0.015 zinc finger protein 526 SOX21 0.014 SRY-box 21 ZFHX2 0.012 PREDICTED: zinc finger homeobox 2 ZFHX2 0.012 PREDICTED: zinc finger homeobox 2 ZFHX2 0.012 PREDICTED: zinc finger homeobox 2 SYN1 0.012 synapsin I isoform Ia SYN1 0.012 synapsin I isoform Ib ONECUT2 0.012 one cut domain, family member 2 TMEM132A 0.012 transmembrane protein 132A isoform a TMEM132A 0.012 transmembrane protein 132A isoform b LOC647055 0.012 PREDICTED: similar to hCG1790759 LOC647055 0.012 PREDICTED: similar to hCG1790759 KSR1 0.012 kinase suppressor of ras CHD3 0.012 chromodomain helicase DNA binding protein 3 isoform... TAF4 0.011 TBP-associated factor 4 MIA3 0.011 melanoma inhibitory activity family, member 3 [Homo... IRX5 0.011 iroquois homeobox protein 5 KIAA0430 0.011 limkain b1 TICAM1 0.011 toll-like receptor adaptor molecule 1 CREBBP 0.011 CREB binding protein isoform b CREBBP 0.011 CREB binding protein isoform a TBX1 0.011 T-box 1 isoform B TBX1 0.011 T-box 1 isoform C TBX1 0.011 T-box 1 isoform A ZMAT3 0.011 p53 target zinc finger protein isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.