Guide to the Human Genome
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Name: CORO2A Sequence: fasta or formatted (525aa) NCBI GI: 16554585
Description:

coronin, actin binding protein, 2A

Referenced in:

Cytoskeleton
WD Repeat Proteins

Other entries for this name:
alt mRNA [525aa] coronin, actin binding protein, 2A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         30           2
 C cysteine            1.7          9           1
 D aspartate           4.8         25           2
 E glutamate           6.9         36           2
 F phenylalanine       3.4         18           1
 G glycine             5.5         29           3
 H histidine           2.9         15           1
 I isoleucine          5.0         26           1
 K lysine              5.7         30           2
 L leucine            10.1         53           2
 M methionine          2.7         14           1
 N asparagine          4.2         22           2
 P proline             6.5         34           3
 Q glutamine           3.6         19           2
 R arginine            6.5         34           2
 S serine              8.4         44           3
 T threonine           5.1         27           2
 V valine              5.9         31           2
 W tryptophan          2.1         11           1
 Y tyrosine            3.4         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coronin, actin binding protein, 2A 
CORO2A                1.000   coronin, actin binding protein, 2A 
CORO2B                0.613   coronin, actin binding protein, 2B 
CORO1B                0.377   coronin, actin binding protein, 1B 
CORO1B                0.377   coronin, actin binding protein, 1B 
CORO1C                0.366   coronin, actin binding protein, 1C isoform 1 
CORO6                 0.356   coronin 6 
CORO1A                0.353   coronin, actin binding protein, 1A 
CORO7                 0.176   coronin 7 
TBL1X                 0.046   transducin beta-like 1X isoform b 
TBL1X                 0.046   transducin beta-like 1X isoform b 
TBL1X                 0.046   transducin beta-like 1X isoform a 
TBL1X                 0.046   transducin beta-like 1X isoform a 
TBL1Y                 0.045   transducin beta-like 1Y 
TBL1Y                 0.045   transducin beta-like 1Y 
TBL1Y                 0.045   transducin beta-like 1Y 
TBL1XR1               0.045   transducin (beta)-like 1 X-linked receptor 1 
WDR5B                 0.038   WD repeat domain 5B 
WDR5                  0.038   WD repeat domain 5 
WDR5                  0.038   WD repeat domain 5 
RBBP7                 0.037   retinoblastoma binding protein 7 
RBBP4                 0.036   retinoblastoma binding protein 4 isoform c 
RBBP4                 0.036   retinoblastoma binding protein 4 isoform b 
RBBP4                 0.036   retinoblastoma binding protein 4 isoform a 
TAF5L                 0.033   PCAF associated factor 65 beta isoform a 
WDR33                 0.032   WD repeat domain 33 isoform 1 
CIAO1                 0.030   WD repeat domain 39 
WDR38                 0.030   WD repeat domain 38 
PEX7                  0.029   peroxisomal biogenesis factor 7 
PRPF4                 0.029   PRP4 pre-mRNA processing factor 4 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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