DDB2 29916

Name: DDB2	Sequence: fasta or formatted (427aa)		NCBI GI: 4557515
Description: damage-specific DNA binding protein 2		Referenced in: DNases, Recombination, and DNA Repair WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 27 2 C cysteine 2.6 11 2 D aspartate 5.2 22 1 E glutamate 3.0 13 2 F phenylalanine 3.7 16 1 G glycine 6.8 29 2 H histidine 3.5 15 1 I isoleucine 5.2 22 1 K lysine 6.1 26 3 L leucine 9.4 40 2 M methionine 2.3 10 2 N asparagine 4.2 18 1 P proline 6.8 29 2 Q glutamine 4.0 17 2 R arginine 6.6 28 2 S serine 8.9 38 2 T threonine 5.6 24 2 V valine 5.2 22 2 W tryptophan 2.6 11 1 Y tyrosine 2.1 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 damage-specific DNA binding protein 2 ERCC8 0.043 excision repair cross-complementing rodent repair def... WDR76 0.035 WD repeat domain 76 WDR51B 0.033 WD repeat domain 51B KATNB1 0.030 katanin p80 subunit B 1 WDR61 0.030 WD repeat domain 61 WDR70 0.028 WD repeat domain 70 CORO7 0.024 coronin 7 WDR51A 0.024 WD repeat domain 51A isoform 2 WDR51A 0.024 WD repeat domain 51A isoform 1 WSB1 0.023 WD repeat and SOCS box-containing 1 isoform 1 WDR51A 0.022 WD repeat domain 51A isoform 3 CIAO1 0.022 WD repeat domain 39 PWP2 0.022 PWP2 periodic tryptophan protein homolog WDR38 0.021 WD repeat domain 38 SPAG16 0.021 sperm associated antigen 16 isoform 1 TAF5L 0.020 PCAF associated factor 65 beta isoform a DCAF5 0.020 WD repeat domain 22 TAF5 0.020 TBP-associated factor 5 TBL1XR1 0.020 transducin (beta)-like 1 X-linked receptor 1 TBL1X 0.020 transducin beta-like 1X isoform b TBL1X 0.020 transducin beta-like 1X isoform b TBL1X 0.020 transducin beta-like 1X isoform a TBL1X 0.020 transducin beta-like 1X isoform a WDR5 0.020 WD repeat domain 5 WDR5 0.020 WD repeat domain 5 WSB1 0.018 WD repeat and SOCS box-containing 1 isoform 2 TBL1Y 0.018 transducin beta-like 1Y TBL1Y 0.018 transducin beta-like 1Y TBL1Y 0.018 transducin beta-like 1Y Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.