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Search of human proteins with 5174607
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5174607 NGFI-A binding protein 2 [Homo sapiens]
(525 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5174607 NGFI-A binding protein 2 [Homo sapiens] 1056 0.0
gi|19923348 NGFI-A binding protein 1 [Homo sapiens] 323 2e-88
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 46 1e-04
gi|33286446 opioid growth factor receptor [Homo sapiens] 45 1e-04
gi|150378478 PR domain containing 8 [Homo sapiens] 45 2e-04
gi|150378439 PR domain containing 8 [Homo sapiens] 45 2e-04
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 44 4e-04
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 42 0.001
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 42 0.001
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 42 0.001
gi|154146231 DMRT-like family A2 [Homo sapiens] 42 0.001
gi|126352608 elastin isoform e precursor [Homo sapiens] 42 0.002
gi|126352446 elastin isoform d precursor [Homo sapiens] 42 0.002
gi|126352322 elastin isoform c precursor [Homo sapiens] 42 0.002
gi|126352700 elastin isoform b precursor [Homo sapiens] 42 0.002
gi|126352440 elastin isoform a precursor [Homo sapiens] 42 0.002
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 42 0.002
gi|11464969 paraneoplastic antigen MA2 [Homo sapiens] 42 0.002
gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens] 41 0.002
gi|4503657 forkhead box H1 [Homo sapiens] 41 0.003
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 41 0.003
gi|24432032 zinc finger protein 503 [Homo sapiens] 40 0.004
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 40 0.005
gi|53829370 neuralized homolog 4 isoform 1 [Homo sapiens] 40 0.005
gi|53829368 neuralized homolog 4 isoform 2 [Homo sapiens] 40 0.005
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 39 0.009
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.009
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.009
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 39 0.009
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 39 0.012
>gi|5174607 NGFI-A binding protein 2 [Homo sapiens]
Length = 525
Score = 1056 bits (2731), Expect = 0.0
Identities = 525/525 (100%), Positives = 525/525 (100%)
Query: 1 MHRAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYET 60
MHRAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYET
Sbjct: 1 MHRAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYET 60
Query: 61 FIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAV 120
FIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAV
Sbjct: 61 FIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAV 120
Query: 121 PVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAG 180
PVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAG
Sbjct: 121 PVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAG 180
Query: 181 DPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPE 240
DPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPE
Sbjct: 181 DPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPE 240
Query: 241 MVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQKEEEIRKYSI 300
MVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQKEEEIRKYSI
Sbjct: 241 MVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQKEEEIRKYSI 300
Query: 301 IYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVARESTYLSSL 360
IYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVARESTYLSSL
Sbjct: 301 IYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVARESTYLSSL 360
Query: 361 KGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEEDSASLSGESL 420
KGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEEDSASLSGESL
Sbjct: 361 KGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEEDSASLSGESL 420
Query: 421 DGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVSHDRVGRLSP 480
DGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVSHDRVGRLSP
Sbjct: 421 DGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVSHDRVGRLSP 480
Query: 481 CVPAKPPLAEFEEGLLDRCPAPGPHPALVEGRRSSVKVEAEASRQ 525
CVPAKPPLAEFEEGLLDRCPAPGPHPALVEGRRSSVKVEAEASRQ
Sbjct: 481 CVPAKPPLAEFEEGLLDRCPAPGPHPALVEGRRSSVKVEAEASRQ 525
>gi|19923348 NGFI-A binding protein 1 [Homo sapiens]
Length = 487
Score = 323 bits (829), Expect = 2e-88
Identities = 184/362 (50%), Positives = 234/362 (64%), Gaps = 37/362 (10%)
Query: 33 AMALPRTLGELQLYRVLQRANLLSYYETFIQQGGDDVQQLCEAGEEEFLEIMALVGMATK 92
A ALPRTLGELQLYR+LQ+ANLLSY++ FIQQGGDDVQQLCEAGEEEFLEIMALVGMA+K
Sbjct: 2 AAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMASK 61
Query: 93 PLHVRRLQKALREWATNPGLFSQPVPAVPVSSIPLFKISETAGTRKGSMSNGHGSPGEKA 152
PLHVRRLQKALR+W TNPGLF+QP+ ++PVSSIP++K+ E + T G + + E++
Sbjct: 62 PLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSY----ERS 117
Query: 153 GSARSFSPKSP--------LELGEKLSPLPGG---PGAGDPRIWPGRSTPESDVGAGGEE 201
+AR K P LG+ S + G G+ R+W G ES+
Sbjct: 118 SNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSL-SPA 176
Query: 202 EAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPEMVRMVVESVERIFRSFPRGDA 261
+ GSP SP + L+ V E VER+ + P+ D
Sbjct: 177 DLGSPA-SPKESS--------------------EALDAAAALSVAECVERMAPTLPKSDL 215
Query: 262 GEVTSLLKLNKKLARSVGHIFEMDDNDSQKEEEIRKYSIIYGRFDSKRREGKQLSLHELT 321
EV LLK NKKLA+ +GHIFEM+D+D KEEEIRKYS IYGRFDSKR++GK L+LHELT
Sbjct: 216 NEVKELLKTNKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELT 275
Query: 322 INEAAAQFCMRDNTLLLRRVELFSLSRQVARESTYLSSLKGSRLHPEELGGPPLKKLKQE 381
+NEAAAQ C++DN LL RR ELF+L+RQ++RE TY + + ++ E K++K E
Sbjct: 276 VNEAAAQLCVKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVE 335
Query: 382 VG 383
G
Sbjct: 336 DG 337
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 45.8 bits (107), Expect = 1e-04
Identities = 38/106 (35%), Positives = 40/106 (37%), Gaps = 11/106 (10%)
Query: 139 GSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDP-RIWPGRSTPESDVGA 197
G M HG PG G R P P G+ PG P G P R PG G
Sbjct: 649 GPMPGPHGGPGGPVGP-RLLGPPPPPRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGR 707
Query: 198 GGEEEAGSPPFSPP--------AGGGVPEGTGA-GGLAAGGTGGGP 234
GG PP PP +GGG P G G GG GG G P
Sbjct: 708 GGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRP 753
Score = 32.3 bits (72), Expect = 1.1
Identities = 22/63 (34%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 175 GGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGG---GVPEGTGAGGLAAGGTG 231
GGPG G + G P G G +G P P GG G G GG GG G
Sbjct: 739 GGPGGG--MVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGG 796
Query: 232 GGP 234
P
Sbjct: 797 HRP 799
Score = 30.0 bits (66), Expect = 5.4
Identities = 29/100 (29%), Positives = 34/100 (34%), Gaps = 12/100 (12%)
Query: 135 GTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDPRIWPGRSTPESD 194
G G NG G PG P PGG G G+ P
Sbjct: 728 GRSGGGPPNGRGGPGGGMVGGGGHRPHEG----------PGG-GMGNSSGHRPHEGPGGG 776
Query: 195 VGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGP 234
+G+G G P S GGG G GG +GG+G P
Sbjct: 777 MGSGHRPHEG-PGGSMGGGGGHRPHEGPGGGISGGSGHRP 815
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 45.4 bits (106), Expect = 1e-04
Identities = 41/134 (30%), Positives = 51/134 (38%), Gaps = 13/134 (9%)
Query: 116 PVPAVPVSSIPLFKISETAGTRKGSMSNGHGS------PGEK-AGSARSFSPKSPLELGE 168
P PA P P SET G R + + PG + AG A +SP E
Sbjct: 524 PSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESP---SE 580
Query: 169 KLSPLPGGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSP---PAGGGVPEGTGAGGL 225
P P GP +P P + G G+E A SP +P PAG E +
Sbjct: 581 TPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSE 640
Query: 226 AAGGTGGGPDRLEP 239
G + GP R EP
Sbjct: 641 TPGPSPAGPTRDEP 654
Score = 43.5 bits (101), Expect = 5e-04
Identities = 42/132 (31%), Positives = 49/132 (37%), Gaps = 13/132 (9%)
Query: 105 EWATNPGLFSQPVPAVPVSSIPLFKISETAGTRKGSMSNGHG--SPGEK-----AGSARS 157
E A +P P PA P P SET G R + SP E AG R
Sbjct: 533 EPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRD 592
Query: 158 FSPKSPLELGEKLSPLPGGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSP---PAGG 214
+SP E P P GP +P P + G G+E A SP +P PAG
Sbjct: 593 EPAESP---SETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGP 649
Query: 215 GVPEGTGAGGLA 226
E AG A
Sbjct: 650 TRDEPAKAGEAA 661
Score = 42.0 bits (97), Expect = 0.001
Identities = 37/130 (28%), Positives = 47/130 (36%), Gaps = 11/130 (8%)
Query: 139 GSMSNGHGSPGEKAGSARSFSPK--SPLELGEKLSPLPGGPGAGDPRIWPGRSTPESDVG 196
G GH G + + PK +P E P P GP +P P + G
Sbjct: 489 GHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAG 548
Query: 197 AGGEEEAGSPPFSP---PAGGGVPEGTGAGGLAAGGTGGGPDRLEPEMVRMVVESVERIF 253
G+E A SP +P PAG E + G + GP R EP ES
Sbjct: 549 PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEP------AESPSETP 602
Query: 254 RSFPRGDAGE 263
P G AG+
Sbjct: 603 GPRPAGPAGD 612
Score = 29.6 bits (65), Expect = 7.1
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 10/133 (7%)
Query: 367 PEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEEDSASLSGESLDGHLQA 426
PE L KK K E+ + P + PGP+S + +L + +LS SL Q
Sbjct: 374 PEPLSPKESKKRKLELSRREQPPTE---PGPQSASEVEKIALNLEGCALSQGSLRTGTQE 430
Query: 427 VGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVSHDRVGRL----SPCV 482
VG P A P P + + ++ +DEG + V+ L SP
Sbjct: 431 VGG---QDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAP 487
Query: 483 PAKPPLAEFEEGL 495
P E G+
Sbjct: 488 SGHPKAGHSENGV 500
>gi|150378478 PR domain containing 8 [Homo sapiens]
Length = 689
Score = 44.7 bits (104), Expect = 2e-04
Identities = 38/137 (27%), Positives = 52/137 (37%), Gaps = 31/137 (22%)
Query: 133 TAGTRKGSMSNGHGSPGEKAGS---------------ARSFSPKSPLELGEK---LSPLP 174
+AG+ G G G+ G G ARSFS SPL LG+K L P
Sbjct: 468 SAGSTSGGGGTGAGAAGGAGGGQGAASDERKSAFSQPARSFSQLSPLVLGQKLGALEPCH 527
Query: 175 GGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGV-------------PEGTG 221
G G R++P + P + G + G P GGG+ P+ +
Sbjct: 528 PADGVGPTRLYPAAADPLAVKLQGAADLNGGCGSLPSGGGGLPKQSPFLYATAFWPKSSA 587
Query: 222 AGGLAAGGTGGGPDRLE 238
A AA GP +L+
Sbjct: 588 AAAAAAAAAAAGPLQLQ 604
Score = 36.6 bits (83), Expect = 0.058
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 23/133 (17%)
Query: 109 NPGLFSQPVPAVPVSSIPLF----KISETAGTRKGSMSNGHGSPGEK-----AGSARSFS 159
N LF+ P P + F K + A ++ ++G G E G + + +
Sbjct: 367 NGRLFAPPSPETGEAKRSAFVEVKKAARAASLQEEGTADGAGVASEDQDAGGGGGSSTPA 426
Query: 160 PKSPLELGEKLSPLPGGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEG 219
SP+ + L+P PGGP P R GG GS S P G
Sbjct: 427 AASPVGAEKLLAPRPGGP-------LPSRLE-------GGSPARGSAFTSVPQLGSAGST 472
Query: 220 TGAGGLAAGGTGG 232
+G GG AG GG
Sbjct: 473 SGGGGTGAGAAGG 485
>gi|150378439 PR domain containing 8 [Homo sapiens]
Length = 689
Score = 44.7 bits (104), Expect = 2e-04
Identities = 38/137 (27%), Positives = 52/137 (37%), Gaps = 31/137 (22%)
Query: 133 TAGTRKGSMSNGHGSPGEKAGS---------------ARSFSPKSPLELGEK---LSPLP 174
+AG+ G G G+ G G ARSFS SPL LG+K L P
Sbjct: 468 SAGSTSGGGGTGAGAAGGAGGGQGAASDERKSAFSQPARSFSQLSPLVLGQKLGALEPCH 527
Query: 175 GGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGV-------------PEGTG 221
G G R++P + P + G + G P GGG+ P+ +
Sbjct: 528 PADGVGPTRLYPAAADPLAVKLQGAADLNGGCGSLPSGGGGLPKQSPFLYATAFWPKSSA 587
Query: 222 AGGLAAGGTGGGPDRLE 238
A AA GP +L+
Sbjct: 588 AAAAAAAAAAAGPLQLQ 604
Score = 36.6 bits (83), Expect = 0.058
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 23/133 (17%)
Query: 109 NPGLFSQPVPAVPVSSIPLF----KISETAGTRKGSMSNGHGSPGEK-----AGSARSFS 159
N LF+ P P + F K + A ++ ++G G E G + + +
Sbjct: 367 NGRLFAPPSPETGEAKRSAFVEVKKAARAASLQEEGTADGAGVASEDQDAGGGGGSSTPA 426
Query: 160 PKSPLELGEKLSPLPGGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEG 219
SP+ + L+P PGGP P R GG GS S P G
Sbjct: 427 AASPVGAEKLLAPRPGGP-------LPSRLE-------GGSPARGSAFTSVPQLGSAGST 472
Query: 220 TGAGGLAAGGTGG 232
+G GG AG GG
Sbjct: 473 SGGGGTGAGAAGG 485
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 43.9 bits (102), Expect = 4e-04
Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 3/126 (2%)
Query: 133 TAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDPRIWPGRSTPE 192
T + S + PG + +A S +E+G PGG GA + G+ E
Sbjct: 87 TVSSEISSAAESRKKPGHYSEAAAEADMSSDVEVGCSALRSPGGLGAAQLKENNGKGYAE 146
Query: 193 SDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPEMVRMVVESVERI 252
S AG A GG G G A GG+G G D++ E + R+
Sbjct: 147 SGSAAGTTTSASGSGLGSLHGG---SGGSGGSAALGGSGSGADQVRRYRTAFTREQIARL 203
Query: 253 FRSFPR 258
+ F R
Sbjct: 204 EKEFYR 209
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 42.4 bits (98), Expect = 0.001
Identities = 46/157 (29%), Positives = 59/157 (37%), Gaps = 23/157 (14%)
Query: 77 EEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPVSSIPLFKISETAGT 136
++E+L +MA +G A P V AT P L S P PA P ++ P + T +
Sbjct: 310 DKEYLSLMAELGEAPVPASVGSTSGP----ATTP-LASAPRPAAPANNPPPPSLMSTTQS 364
Query: 137 RKGSMSNG-----------HGSPGEKAGSARSF-SPKSPLELGEKLSPLPGGPGAGDPRI 184
R M++G G PG G SF P L G P+ P G P
Sbjct: 365 RPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPN-GPPPP 423
Query: 185 WPGRSTPESDVGAGGEEEAGSPPF-----SPPAGGGV 216
W P + G G PP S P G GV
Sbjct: 424 WMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGV 460
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 42.4 bits (98), Expect = 0.001
Identities = 46/157 (29%), Positives = 59/157 (37%), Gaps = 23/157 (14%)
Query: 77 EEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPVSSIPLFKISETAGT 136
++E+L +MA +G A P V AT P L S P PA P ++ P + T +
Sbjct: 310 DKEYLSLMAELGEAPVPASVGSTSGP----ATTP-LASAPRPAAPANNPPPPSLMSTTQS 364
Query: 137 RKGSMSNG-----------HGSPGEKAGSARSF-SPKSPLELGEKLSPLPGGPGAGDPRI 184
R M++G G PG G SF P L G P+ P G P
Sbjct: 365 RPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPN-GPPPP 423
Query: 185 WPGRSTPESDVGAGGEEEAGSPPF-----SPPAGGGV 216
W P + G G PP S P G GV
Sbjct: 424 WMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGV 460
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 42.4 bits (98), Expect = 0.001
Identities = 46/157 (29%), Positives = 59/157 (37%), Gaps = 23/157 (14%)
Query: 77 EEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPVSSIPLFKISETAGT 136
++E+L +MA +G A P V AT P L S P PA P ++ P + T +
Sbjct: 310 DKEYLSLMAELGEAPVPASVGSTSGP----ATTP-LASAPRPAAPANNPPPPSLMSTTQS 364
Query: 137 RKGSMSNG-----------HGSPGEKAGSARSF-SPKSPLELGEKLSPLPGGPGAGDPRI 184
R M++G G PG G SF P L G P+ P G P
Sbjct: 365 RPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPN-GPPPP 423
Query: 185 WPGRSTPESDVGAGGEEEAGSPPF-----SPPAGGGV 216
W P + G G PP S P G GV
Sbjct: 424 WMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGV 460
>gi|154146231 DMRT-like family A2 [Homo sapiens]
Length = 542
Score = 42.0 bits (97), Expect = 0.001
Identities = 40/119 (33%), Positives = 49/119 (41%), Gaps = 18/119 (15%)
Query: 134 AGTRKGSMSNGHGSPGEKAGSAR-SFSPKSPLELGEKLSPLPG-----GPGAGDPRIWPG 187
AG G+ G+ G +A + PK+ L+ G SPLP P D PG
Sbjct: 170 AGAPAGTGGGAAGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPPVKPLSPDGADSG--PG 227
Query: 188 RSTPESDVGAG-----GEEEAGSP--PFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEP 239
S+PE G+G GE +GSP S AGG P G GG GG P P
Sbjct: 228 TSSPEVRPGSGSENGDGESFSGSPLARASKEAGGSCPGSAGPGG---GGEEDSPGSASP 283
Score = 31.2 bits (69), Expect = 2.4
Identities = 39/154 (25%), Positives = 55/154 (35%), Gaps = 25/154 (16%)
Query: 110 PGLFSQPVPAVPVSSIPLFKIS-ETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGE 168
PG S+ S PL + S E G+ GS G G + GSA +S E +
Sbjct: 235 PGSGSENGDGESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSESGSEADK 294
Query: 169 ---KLSPLPGGPGAGDP----------RIWPGRSTPESDV---GAGGEEEAGSPPFSPPA 212
+ +P PG G P R++PG ++ G GG+
Sbjct: 295 EEGEAAPAPGLGGGSGPRQRTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAIEQVLNHH 354
Query: 213 GGGVPEGTG--------AGGLAAGGTGGGPDRLE 238
GG+ G G A G AA P R++
Sbjct: 355 RGGLAAGLGPAAPPDKAAVGAAAAADDAWPSRVD 388
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/131 (29%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 110 PGLFSQPVPAVPVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEK 169
PG+ VP VP +IP GT + + + K G+A P P G
Sbjct: 275 PGVGGAGVPGVP-GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGP-GFGPG 332
Query: 170 LSPLPGG-------PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGA 222
+ +PG PGAG P + PG P + V EA + + A G G G
Sbjct: 333 VVGVPGAGVPGVGVPGAGIPVV-PGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGV 391
Query: 223 GGLAAGGTGGG 233
GG+ G G G
Sbjct: 392 GGIPTYGVGAG 402
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/131 (29%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 110 PGLFSQPVPAVPVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEK 169
PG+ VP VP +IP GT + + + K G+A P P G
Sbjct: 280 PGVGGAGVPGVP-GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGP-GFGPG 337
Query: 170 LSPLPGG-------PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGA 222
+ +PG PGAG P + PG P + V EA + + A G G G
Sbjct: 338 VVGVPGAGVPGVGVPGAGIPVV-PGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGV 396
Query: 223 GGLAAGGTGGG 233
GG+ G G G
Sbjct: 397 GGIPTYGVGAG 407
Score = 30.4 bits (67), Expect = 4.1
Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 14/106 (13%)
Query: 135 GTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDPRIWPGRSTPESD 194
G G++ G PG K P P+ G + L G GA +PG P
Sbjct: 45 GAGLGALGGGALGPGGK--------PLKPVPGGLAGAGLGAGLGAFPAVTFPGALVP--- 93
Query: 195 VGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPE 240
GG +A + + AG G+ G GGL P + P+
Sbjct: 94 ---GGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQ 136
Score = 29.6 bits (65), Expect = 7.1
Identities = 35/136 (25%), Positives = 46/136 (33%), Gaps = 22/136 (16%)
Query: 111 GLFSQPVPAVPVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKL 170
GL + P P + +P A + G G G S +P P +
Sbjct: 78 GLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVP----GAV 133
Query: 171 SPLPGG-------PGAGDPRIWPGRSTPES-----DVGAGGEEEAGSPPFSPPAGGGVPE 218
P PG PG G P ++PG P + V G AG P +P GG
Sbjct: 134 VPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAF-- 191
Query: 219 GTGAGGLAAGGTGGGP 234
G+ G GGP
Sbjct: 192 ----AGIPGVGPFGGP 203
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/131 (29%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 110 PGLFSQPVPAVPVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEK 169
PG+ VP VP +IP GT + + + K G+A P P G
Sbjct: 280 PGVGGAGVPGVP-GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGP-GFGPG 337
Query: 170 LSPLPGG-------PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGA 222
+ +PG PGAG P + PG P + V EA + + A G G G
Sbjct: 338 VVGVPGAGVPGVGVPGAGIPVV-PGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGV 396
Query: 223 GGLAAGGTGGG 233
GG+ G G G
Sbjct: 397 GGIPTYGVGAG 407
Score = 30.4 bits (67), Expect = 4.1
Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 14/106 (13%)
Query: 135 GTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDPRIWPGRSTPESD 194
G G++ G PG K P P+ G + L G GA +PG P
Sbjct: 45 GAGLGALGGGALGPGGK--------PLKPVPGGLAGAGLGAGLGAFPAVTFPGALVP--- 93
Query: 195 VGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPE 240
GG +A + + AG G+ G GGL P + P+
Sbjct: 94 ---GGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQ 136
Score = 29.6 bits (65), Expect = 7.1
Identities = 35/136 (25%), Positives = 46/136 (33%), Gaps = 22/136 (16%)
Query: 111 GLFSQPVPAVPVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKL 170
GL + P P + +P A + G G G S +P P +
Sbjct: 78 GLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVP----GAV 133
Query: 171 SPLPGG-------PGAGDPRIWPGRSTPES-----DVGAGGEEEAGSPPFSPPAGGGVPE 218
P PG PG G P ++PG P + V G AG P +P GG
Sbjct: 134 VPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAF-- 191
Query: 219 GTGAGGLAAGGTGGGP 234
G+ G GGP
Sbjct: 192 ----AGIPGVGPFGGP 203
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/131 (29%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 110 PGLFSQPVPAVPVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEK 169
PG+ VP VP +IP GT + + + K G+A P P G
Sbjct: 265 PGVGGAGVPGVP-GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGP-GFGPG 322
Query: 170 LSPLPGG-------PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGA 222
+ +PG PGAG P + PG P + V EA + + A G G G
Sbjct: 323 VVGVPGAGVPGVGVPGAGIPVV-PGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGV 381
Query: 223 GGLAAGGTGGG 233
GG+ G G G
Sbjct: 382 GGIPTYGVGAG 392
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/131 (29%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 110 PGLFSQPVPAVPVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEK 169
PG+ VP VP +IP GT + + + K G+A P P G
Sbjct: 275 PGVGGAGVPGVP-GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGP-GFGPG 332
Query: 170 LSPLPGG-------PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGA 222
+ +PG PGAG P + PG P + V EA + + A G G G
Sbjct: 333 VVGVPGAGVPGVGVPGAGIPVV-PGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGV 391
Query: 223 GGLAAGGTGGG 233
GG+ G G G
Sbjct: 392 GGIPTYGVGAG 402
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 41.6 bits (96), Expect = 0.002
Identities = 28/69 (40%), Positives = 30/69 (43%), Gaps = 17/69 (24%)
Query: 175 GGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPA----GGGVPEGTGAGGLAAGGT 230
GGP G P P + G G G PP PP GGG P G G GG +AGG
Sbjct: 7 GGPPPGPP--------PPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGP 58
Query: 231 -----GGGP 234
GGGP
Sbjct: 59 SQPPGGGGP 67
>gi|11464969 paraneoplastic antigen MA2 [Homo sapiens]
Length = 364
Score = 41.6 bits (96), Expect = 0.002
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 238 EPEMVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQKEEEIRK 297
E E + +E I + +P +A + L + + A + HI + D+ EE +
Sbjct: 177 EEESFEVWLEQATEIVKEWPVTEAEKKRWLAESLRGPALDLMHIVQADNPSISVEECLEA 236
Query: 298 YSIIYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVARESTYL 357
+ ++G +S+R + E + + +R TLL R VE ++ R++A +
Sbjct: 237 FKQVFGSLESRRTAQVRYLKTYQEEGEKVSAYVLRLETLLRRAVEKRAIPRRIADQVRLE 296
Query: 358 SSLKGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEEDSASLSG 417
+ G+ L+ ++ L++LK Q PPP + R EE+ AS
Sbjct: 297 QVMAGATLN--QMLWCRLRELKD----------QGPPPSFLELMKVIREE-EEEEASFEN 343
Query: 418 ESLD 421
ES++
Sbjct: 344 ESIE 347
>gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens]
Length = 572
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/51 (41%), Positives = 23/51 (45%)
Query: 186 PGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDR 236
P S S G GG G+ P PA GGVP G G GG G G +R
Sbjct: 16 PDSSAGGSSAGGGGGSAGGAAPSEGPAVGGVPGGAGGGGGVVGAGSGEDNR 66
Score = 33.9 bits (76), Expect = 0.37
Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 12/92 (13%)
Query: 142 SNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDPRIWPGRSTPESDVGAGGEE 201
S G S G GSA +P G + +PGG G G + G + E + + GE
Sbjct: 19 SAGGSSAGGGGGSAGGAAPSE----GPAVGGVPGGAGGGGGVV--GAGSGEDNRSSAGE- 71
Query: 202 EAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGG 233
P S AGG V GGL G G
Sbjct: 72 -----PGSAGAGGDVNGTAAVGGLVVSAQGVG 98
>gi|4503657 forkhead box H1 [Homo sapiens]
Length = 365
Score = 40.8 bits (94), Expect = 0.003
Identities = 43/140 (30%), Positives = 52/140 (37%), Gaps = 20/140 (14%)
Query: 119 AVPVSSIPL--FKISETAGTRKGSMSNGHGSPGEKAGSA-------RSFSPKSPLELGEK 169
AV VS IP ++ TA R+ G+ + G R SP P G
Sbjct: 109 AVDVSLIPAEALRLQNTALCRRWQNGGARGAFAKDLGPYVLHGRPYRPPSPPPPPSEGFS 168
Query: 170 LSPLPGGPGAGDPRIWPGRSTPESDVGAG----GEEEAGSPPFSPPAGG-----GVPEGT 220
+ L GG G G P WPG + S V AG GEE +PP +P T
Sbjct: 169 IKSLLGGSGEGAP--WPGLAPQSSPVPAGTGNSGEEAVPTPPLPSSERPLWPLCPLPGPT 226
Query: 221 GAGGLAAGGTGGGPDRLEPE 240
G G GP L PE
Sbjct: 227 RVEGETVQGGAIGPSTLSPE 246
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Query: 145 HGSPGEKAGSARSFSPKSPLELGEKLSP-------LPGGPGAGDPRIWPGRSTPESDVGA 197
HG PG K + + P GE+ SP PG PG P+ PG P+ D G
Sbjct: 355 HGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGV 414
Query: 198 GGEEEAGSP-PFSPPAGGGVPEGTGAGG 224
GG G P P P G+P G G
Sbjct: 415 GG--PPGLPGPVGPAGAKGMPGHNGEAG 440
Score = 36.2 bits (82), Expect = 0.075
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 137 RKGSMSNGH-GSPGEKA--GSARSFSPKSPLELGEK-LSPLPGGPGAGDPRIWPGRSTPE 192
+KG M G G PGE+ G P P +G++ + +PG PG R +PG P
Sbjct: 187 QKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGP- 245
Query: 193 SDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGL-AAGGTGGGP 234
+G G + G P P G G P GA G GT G P
Sbjct: 246 --IGPPGPQ--GPPGERGPEGIGKPGAAGAPGQPGIPGTKGLP 284
Score = 33.1 bits (74), Expect = 0.64
Identities = 21/61 (34%), Positives = 21/61 (34%)
Query: 174 PGGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGG 233
PG PG PR PG S P G G G P P G G GL G
Sbjct: 62 PGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERG 121
Query: 234 P 234
P
Sbjct: 122 P 122
Score = 33.1 bits (74), Expect = 0.64
Identities = 29/108 (26%), Positives = 35/108 (32%), Gaps = 19/108 (17%)
Query: 146 GSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDPRIWP---GRSTPESDVGAGGEEE 202
G+PG + +P P G+K G PG R P G + P G G E
Sbjct: 165 GAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGVGKRGE 224
Query: 203 AGSP----------------PFSPPAGGGVPEGTGAGGLAAGGTGGGP 234
G P P PP G P G G+ G G P
Sbjct: 225 NGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAP 272
Score = 30.0 bits (66), Expect = 5.4
Identities = 34/116 (29%), Positives = 40/116 (34%), Gaps = 15/116 (12%)
Query: 110 PGLFSQPVPAVPVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEK 169
PGL P P P + + + AG R G PG + P P G+
Sbjct: 418 PGL---PGPVGPAGAKGMPGHNGEAGPR-----GAPGIPGTRGPIGPPGIPGFPGSKGDP 469
Query: 170 LSPLPGGP------GAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEG 219
SP P GP G P PG P G G PP PP +PEG
Sbjct: 470 GSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPP-GPPGQAVMPEG 524
>gi|24432032 zinc finger protein 503 [Homo sapiens]
Length = 646
Score = 40.4 bits (93), Expect = 0.004
Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 11/122 (9%)
Query: 113 FSQPVPAVPVSSIPL-FKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLS 171
+ QP+P+ PVS I L K S A + G P SP S L
Sbjct: 92 YLQPLPSTPVSPIELDAKKSPLALLAQTCSQIGKPDP----------SPSSKLSSVASNG 141
Query: 172 PLPGGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTG 231
GG G G +S P G E+++ P+S P G G GG GG G
Sbjct: 142 GGAGGAGGGAAGDKDTKSGPLKLSDIGVEDKSSFKPYSKPGSDKKEPGGGGGGGGGGGGG 201
Query: 232 GG 233
GG
Sbjct: 202 GG 203
Score = 30.4 bits (67), Expect = 4.1
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 32/121 (26%)
Query: 131 SETAGTRKGSMSNGHGSP--GEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDPRIWPGR 188
SE +G R S + +P G + SA + SP G LS G P D +
Sbjct: 207 SEKSGFRVPSATCQPFTPRTGSPSSSASACSP------GGMLSSAGGAPEGKDDK----- 255
Query: 189 STPESDVGAGGEEEAGSPPFSPP---------AGGGV-------PEGTGAGGLAAGGTGG 232
++DVG GG+ G+ P GGG+ P+G G GG A G G
Sbjct: 256 --KDTDVGGGGKGTGGASAEGGPTGLAHGRISCGGGINVDVNQHPDG-GPGGKALGSDCG 312
Query: 233 G 233
G
Sbjct: 313 G 313
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 40.0 bits (92), Expect = 0.005
Identities = 45/135 (33%), Positives = 53/135 (39%), Gaps = 9/135 (6%)
Query: 107 ATNPGLFSQPV-PAVPVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLE 165
A P L P PA PVS P ++S A G +G SP K G A + S + L
Sbjct: 88 AEPPALSPAPASPARPVSPAPGRRLSLWA-VPPGPPLSGGLSPDPKPGGAPTSSRRPLLS 146
Query: 166 LGEKLSPLPGGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGL 225
P P G G PG S+P G G +PP PPA T +G
Sbjct: 147 SPSWGGPEPEGRAGGGI---PGSSSPHP--GTGSRRLKVAPP--PPAPKPCKTVTTSGAK 199
Query: 226 AAGGTGGGPDRLEPE 240
A GG G G PE
Sbjct: 200 AGGGKGAGSRLSWPE 214
Score = 33.5 bits (75), Expect = 0.49
Identities = 47/163 (28%), Positives = 58/163 (35%), Gaps = 28/163 (17%)
Query: 101 KALREWATNPG------LFSQPVPA-VPVSSI-PLFKISETAGT----RKGSMSNGHGSP 148
+ L WA PG L P P P SS PL G R G G SP
Sbjct: 110 RRLSLWAVPPGPPLSGGLSPDPKPGGAPTSSRRPLLSSPSWGGPEPEGRAGGGIPGSSSP 169
Query: 149 GEKAGSARSF------SPKSPLELGEKLSPLPGGPGAGDPRIWP-GRSTP-----ESDVG 196
GS R +PK + + GG GAG WP P +S G
Sbjct: 170 HPGTGSRRLKVAPPPPAPKPCKTVTTSGAKAGGGKGAGSRLSWPESEGKPRVKGSKSSAG 229
Query: 197 AGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEP 239
G A + + AGGG + +GG+ AG G +L P
Sbjct: 230 TGASVSAAAT--AAAAGGGGSTASTSGGVGAG--AGARGKLSP 268
Score = 31.2 bits (69), Expect = 2.4
Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 15/112 (13%)
Query: 139 GSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGD--PRIWPGRSTPESDVG 196
GS ++ G G AG+ SP+ S L GP AG P P +P + V
Sbjct: 247 GSTASTSGGVGAGAGARGKLSPRKGKSKTLDNSDLHPGPPAGSPPPLTLPPTPSPATAVT 306
Query: 197 AGGEEEAGSPP---FSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPEMVRMV 245
A + G P PP A GL G GG + +M++ +
Sbjct: 307 AASAQPPGPAPPITLEPP----------APGLKRGREGGRASTRDRKMLKFI 348
>gi|53829370 neuralized homolog 4 isoform 1 [Homo sapiens]
Length = 1562
Score = 40.0 bits (92), Expect = 0.005
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 196 GAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPEMVRMV 245
G+GG +G P P GGG P G+G+G + GG G G + L P R+V
Sbjct: 4 GSGGSGGSGGGPGPGPGGGGGPSGSGSGPGSNGGLGSGGE-LHPRTGRLV 52
>gi|53829368 neuralized homolog 4 isoform 2 [Homo sapiens]
Length = 1560
Score = 40.0 bits (92), Expect = 0.005
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 196 GAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPEMVRMV 245
G+GG +G P P GGG P G+G+G + GG G G + L P R+V
Sbjct: 4 GSGGSGGSGGGPGPGPGGGGGPSGSGSGPGSNGGLGSGGE-LHPRTGRLV 52
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 39.3 bits (90), Expect = 0.009
Identities = 49/195 (25%), Positives = 72/195 (36%), Gaps = 50/195 (25%)
Query: 114 SQPVPAVPVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPL 173
S P+P VP+ P T +G G G P P P + PL
Sbjct: 339 SGPLPPVPLGIAP------PPPTPRGPPPPGRGGP-----------PPPPPPATGRSGPL 381
Query: 174 PGGP-GAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPA---GGGVPEGTGAG------ 223
P P GAG P + P P +G +PP PPA GG+ G G G
Sbjct: 382 PPPPPGAGGPPMPPPPPPPPPPPSSG---NGPAPPPLPPALVPAGGLAPGGGRGALLDQI 438
Query: 224 --GLAAGGTGGGPD--RLEPEMVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVG 279
G+ T G P+ L+P P+ G V +L+ + +K +R++
Sbjct: 439 RQGIQLNKTPGAPESSALQPP----------------PQSSEGLVGALMHVMQKRSRAIH 482
Query: 280 HIFEMDDNDSQKEEE 294
E +D ++E+
Sbjct: 483 SSDEGEDQAGDEDED 497
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 39.3 bits (90), Expect = 0.009
Identities = 44/148 (29%), Positives = 58/148 (39%), Gaps = 22/148 (14%)
Query: 116 PVPAVPVSSIPLFKIS--ETAGTRKGSMSN-----GHGSPGEKAGSARSFSPKSPLELGE 168
P P P S P +S + AG + S G+ S G + G+A S P + L
Sbjct: 609 PGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS-GPEGGAAASPPPDAELAACH 667
Query: 169 KLS----PLP-----GGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEG 219
+ P P G PGA P WP + P S G E P + PA G + G
Sbjct: 668 PAAWSRGPAPPLAFRGAPGA--PLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPG 725
Query: 220 TG---AGGLAAGGTGGGPDRLEPEMVRM 244
+GG AA G G G P+ R+
Sbjct: 726 PSPGTSGGKAAAGAGAGASSRSPKQARL 753
Score = 31.6 bits (70), Expect = 1.9
Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 25/107 (23%)
Query: 148 PGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPP 207
PG G + + P E +P PGA DP PG S ++ GAG + SP
Sbjct: 697 PGSADGLCTIYETEGP----ESATP---APGALDPGPSPGTSGGKAAAGAGAGASSRSP- 748
Query: 208 FSPPAGGGVPEGT----------------GAGGLAAGGTGGGPDRLE 238
G +P G A AAGG+GGGP E
Sbjct: 749 -KQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 794
Score = 30.4 bits (67), Expect = 4.1
Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 26/85 (30%)
Query: 393 PPPGPESYV------------PPYRPSLEEDSASLSGESLDGHLQAVGSCPR-------- 432
P PGP++ V PP PS S++LSG L GH + S P
Sbjct: 590 PTPGPDTSVSGPRLTLALAPGPPPPPS-RSPSSTLSGPDLAGHSSSATSTPEELRGYDSG 648
Query: 433 -----LTPPPADLPLALPAHGLWSR 452
PP D LA WSR
Sbjct: 649 PEGGAAASPPPDAELAACHPAAWSR 673
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 39.3 bits (90), Expect = 0.009
Identities = 44/148 (29%), Positives = 58/148 (39%), Gaps = 22/148 (14%)
Query: 116 PVPAVPVSSIPLFKIS--ETAGTRKGSMSN-----GHGSPGEKAGSARSFSPKSPLELGE 168
P P P S P +S + AG + S G+ S G + G+A S P + L
Sbjct: 878 PGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS-GPEGGAAASPPPDAELAACH 936
Query: 169 KLS----PLP-----GGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEG 219
+ P P G PGA P WP + P S G E P + PA G + G
Sbjct: 937 PAAWSRGPAPPLAFRGAPGA--PLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPG 994
Query: 220 TG---AGGLAAGGTGGGPDRLEPEMVRM 244
+GG AA G G G P+ R+
Sbjct: 995 PSPGTSGGKAAAGAGAGASSRSPKQARL 1022
Score = 31.6 bits (70), Expect = 1.9
Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 25/107 (23%)
Query: 148 PGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPP 207
PG G + + P E +P PGA DP PG S ++ GAG + SP
Sbjct: 966 PGSADGLCTIYETEGP----ESATP---APGALDPGPSPGTSGGKAAAGAGAGASSRSP- 1017
Query: 208 FSPPAGGGVPEGT----------------GAGGLAAGGTGGGPDRLE 238
G +P G A AAGG+GGGP E
Sbjct: 1018 -KQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 1063
Score = 30.4 bits (67), Expect = 4.1
Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 26/85 (30%)
Query: 393 PPPGPESYV------------PPYRPSLEEDSASLSGESLDGHLQAVGSCPR-------- 432
P PGP++ V PP PS S++LSG L GH + S P
Sbjct: 859 PTPGPDTSVSGPRLTLALAPGPPPPPS-RSPSSTLSGPDLAGHSSSATSTPEELRGYDSG 917
Query: 433 -----LTPPPADLPLALPAHGLWSR 452
PP D LA WSR
Sbjct: 918 PEGGAAASPPPDAELAACHPAAWSR 942
Score = 29.6 bits (65), Expect = 7.1
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Query: 367 PEELGGPPLKKLKQEVGEQSHPEIQQPPP-GPESYVPPYRPSLEEDSASLSGESLDGHLQ 425
P L PPL+ + +PPP P + P +L AS G++
Sbjct: 758 PPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA 817
Query: 426 AVGSCPRLTPPPADLP-LALP 445
++ P TPPP P LA P
Sbjct: 818 SLPMSPLATPPPQAPPVLAAP 838
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 39.3 bits (90), Expect = 0.009
Identities = 44/148 (29%), Positives = 58/148 (39%), Gaps = 22/148 (14%)
Query: 116 PVPAVPVSSIPLFKIS--ETAGTRKGSMSN-----GHGSPGEKAGSARSFSPKSPLELGE 168
P P P S P +S + AG + S G+ S G + G+A S P + L
Sbjct: 570 PGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS-GPEGGAAASPPPDAELAACH 628
Query: 169 KLS----PLP-----GGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEG 219
+ P P G PGA P WP + P S G E P + PA G + G
Sbjct: 629 PAAWSRGPAPPLAFRGAPGA--PLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPG 686
Query: 220 TG---AGGLAAGGTGGGPDRLEPEMVRM 244
+GG AA G G G P+ R+
Sbjct: 687 PSPGTSGGKAAAGAGAGASSRSPKQARL 714
Score = 31.6 bits (70), Expect = 1.9
Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 25/107 (23%)
Query: 148 PGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPP 207
PG G + + P E +P PGA DP PG S ++ GAG + SP
Sbjct: 658 PGSADGLCTIYETEGP----ESATP---APGALDPGPSPGTSGGKAAAGAGAGASSRSP- 709
Query: 208 FSPPAGGGVPEGT----------------GAGGLAAGGTGGGPDRLE 238
G +P G A AAGG+GGGP E
Sbjct: 710 -KQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 755
Score = 30.4 bits (67), Expect = 4.1
Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 26/85 (30%)
Query: 393 PPPGPESYV------------PPYRPSLEEDSASLSGESLDGHLQAVGSCPR-------- 432
P PGP++ V PP PS S++LSG L GH + S P
Sbjct: 551 PTPGPDTSVSGPRLTLALAPGPPPPPS-RSPSSTLSGPDLAGHSSSATSTPEELRGYDSG 609
Query: 433 -----LTPPPADLPLALPAHGLWSR 452
PP D LA WSR
Sbjct: 610 PEGGAAASPPPDAELAACHPAAWSR 634
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 38.9 bits (89), Expect = 0.012
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 128 FKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGG--------PGA 179
F++ T+ G MS G G G GS+R+ P+ G +PGG PG
Sbjct: 167 FEMQSRKTTQSGQMS-GEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGG 225
Query: 180 GDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVP 217
P G++ P +G G PP PP G +P
Sbjct: 226 PPPPFPAGQTPPRPPLGPPGPP---GPPGPPPPGQVLP 260
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.134 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,231,952
Number of Sequences: 37866
Number of extensions: 1640550
Number of successful extensions: 11653
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 583
Number of HSP's that attempted gapping in prelim test: 8480
Number of HSP's gapped (non-prelim): 3010
length of query: 525
length of database: 18,247,518
effective HSP length: 107
effective length of query: 418
effective length of database: 14,195,856
effective search space: 5933867808
effective search space used: 5933867808
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.