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Search of human proteins with 5174513
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5174513 mothers against decapentaplegic homolog 3 isoform 1
[Homo sapiens]
(425 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5174513 mothers against decapentaplegic homolog 3 isoform 1 [... 899 0.0
gi|209693426 Sma- and Mad-related protein 2 isoform 2 [Homo sapi... 825 0.0
gi|51173730 Sma- and Mad-related protein 2 isoform 1 [Homo sapiens] 809 0.0
gi|5174511 Sma- and Mad-related protein 2 isoform 1 [Homo sapiens] 809 0.0
gi|223029442 mothers against decapentaplegic homolog 3 isoform 3... 763 0.0
gi|223029440 mothers against decapentaplegic homolog 3 isoform 2... 680 0.0
gi|47778931 SMAD, mothers against DPP homolog 5 [Homo sapiens] 563 e-160
gi|47778929 SMAD, mothers against DPP homolog 5 [Homo sapiens] 563 e-160
gi|47778925 SMAD, mothers against DPP homolog 5 [Homo sapiens] 563 e-160
gi|51173727 Sma- and Mad-related protein 1 [Homo sapiens] 555 e-158
gi|5174509 Sma- and Mad-related protein 1 [Homo sapiens] 555 e-158
gi|5174519 SMAD family member 9 isoform b [Homo sapiens] 555 e-158
gi|187828357 SMAD family member 9 isoform a [Homo sapiens] 548 e-156
gi|223029444 mothers against decapentaplegic homolog 3 isoform 4... 487 e-137
gi|4885457 mothers against decapentaplegic homolog 4 [Homo sapiens] 272 4e-73
gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens] 139 4e-33
gi|5174517 SMAD family member 7 [Homo sapiens] 127 3e-29
gi|218749837 SMAD family member 6 isoform 2 [Homo sapiens] 101 1e-21
gi|146134388 YLP motif containing 1 [Homo sapiens] 35 0.17
gi|239757414 PREDICTED: hypothetical protein XP_002345432 [Homo ... 34 0.29
gi|110611908 mitogen-activated protein kinase kinase kinase kina... 33 0.64
gi|6005810 mitogen-activated protein kinase kinase kinase kinase... 33 0.64
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 33 0.64
gi|217416343 fibrosin-like 1 [Homo sapiens] 32 0.84
gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens] 32 1.1
gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens] 32 1.1
gi|157168329 formin 1 [Homo sapiens] 31 1.9
gi|154689780 son of sevenless homolog 2 [Homo sapiens] 31 1.9
gi|34452173 integrin alpha X precursor [Homo sapiens] 31 1.9
gi|58219024 hypothetical protein LOC352999 [Homo sapiens] 31 2.4
>gi|5174513 mothers against decapentaplegic homolog 3 isoform 1
[Homo sapiens]
Length = 425
Score = 899 bits (2324), Expect = 0.0
Identities = 425/425 (100%), Positives = 425/425 (100%)
Query: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNV 60
MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNV
Sbjct: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNV 60
Query: 61 NTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDEV 120
NTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDEV
Sbjct: 61 NTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDEV 120
Query: 121 CVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETP 180
CVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETP
Sbjct: 121 CVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETP 180
Query: 181 PPGYLSEDGETSDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYEL 240
PPGYLSEDGETSDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYEL
Sbjct: 181 PPGYLSEDGETSDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYEL 240
Query: 241 NQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG 300
NQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG
Sbjct: 241 NQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG 300
Query: 301 GEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGF 360
GEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGF
Sbjct: 301 GEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGF 360
Query: 361 EAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIR 420
EAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIR
Sbjct: 361 EAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIR 420
Query: 421 CSSVS 425
CSSVS
Sbjct: 421 CSSVS 425
>gi|209693426 Sma- and Mad-related protein 2 isoform 2 [Homo
sapiens]
Length = 437
Score = 825 bits (2130), Expect = 0.0
Identities = 392/437 (89%), Positives = 411/437 (94%), Gaps = 12/437 (2%)
Query: 1 MSSILPFTPPIVKRLLGWKK----------GEQNGQEEKWCEKAVKSLVKKLKKTGQLDE 50
MSSILPFTPP+VKRLLGWKK GEQNGQEEKWCEKAVKSLVKKLKKTG+LDE
Sbjct: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
Query: 51 LEKAITTQNVNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCE 110
LEKAITTQN NTKC+TIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHEL+A+E CE
Sbjct: 61 LEKAITTQNCNTKCVTIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELKAIENCE 120
Query: 111 FAFNMKKDEVCVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGI 170
+AFN+KKDEVCVNPYHYQRVETPVLPPVLVPRHTEI E PPLDDY+HSIPENTNFPAGI
Sbjct: 121 YAFNLKKDEVCVNPYHYQRVETPVLPPVLVPRHTEILTELPPLDDYTHSIPENTNFPAGI 180
Query: 171 EPQSN-IPETPPPGYLSEDGETSDHQMNHSMDAGSP-NLSPNPMSPAHNNLDLQPVTYCE 228
EPQSN IPETPPPGY+SEDGETSD Q+N SMD GSP LSP +SP +++LDLQPVTY E
Sbjct: 181 EPQSNYIPETPPPGYISEDGETSDQQLNQSMDTGSPAELSPTTLSPVNHSLDLQPVTYSE 240
Query: 229 PAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRR 288
PAFWCSI+YYELNQRVGETFHASQPS+TVDGFTDPSNSERFCLGLLSNVNRNA VE+TRR
Sbjct: 241 PAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSERFCLGLLSNVNRNATVEMTRR 300
Query: 289 HIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEF 348
HIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEF
Sbjct: 301 HIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEF 360
Query: 349 AALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLD 408
AALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLD
Sbjct: 361 AALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLD 420
Query: 409 KVLTQMGSPSIRCSSVS 425
KVLTQMGSPS+RCSS+S
Sbjct: 421 KVLTQMGSPSVRCSSMS 437
>gi|51173730 Sma- and Mad-related protein 2 isoform 1 [Homo sapiens]
Length = 467
Score = 809 bits (2089), Expect = 0.0
Identities = 392/467 (83%), Positives = 411/467 (88%), Gaps = 42/467 (8%)
Query: 1 MSSILPFTPPIVKRLLGWKK----------GEQNGQEEKWCEKAVKSLVKKLKKTGQLDE 50
MSSILPFTPP+VKRLLGWKK GEQNGQEEKWCEKAVKSLVKKLKKTG+LDE
Sbjct: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
Query: 51 LEKAITTQNVNTKCITIP------------------------------RSLDGRLQVSHR 80
LEKAITTQN NTKC+TIP RSLDGRLQVSHR
Sbjct: 61 LEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHR 120
Query: 81 KGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDEVCVNPYHYQRVETPVLPPVLV 140
KGLPHVIYCRLWRWPDLHSHHEL+A+E CE+AFN+KKDEVCVNPYHYQRVETPVLPPVLV
Sbjct: 121 KGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLV 180
Query: 141 PRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSN-IPETPPPGYLSEDGETSDHQMNHS 199
PRHTEI E PPLDDY+HSIPENTNFPAGIEPQSN IPETPPPGY+SEDGETSD Q+N S
Sbjct: 181 PRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQS 240
Query: 200 MDAGSP-NLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVD 258
MD GSP LSP +SP +++LDLQPVTY EPAFWCSI+YYELNQRVGETFHASQPS+TVD
Sbjct: 241 MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVD 300
Query: 259 GFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP 318
GFTDPSNSERFCLGLLSNVNRNA VE+TRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP
Sbjct: 301 GFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP 360
Query: 319 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK 378
NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK
Sbjct: 361 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK 420
Query: 379 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPS+RCSS+S
Sbjct: 421 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
>gi|5174511 Sma- and Mad-related protein 2 isoform 1 [Homo sapiens]
Length = 467
Score = 809 bits (2089), Expect = 0.0
Identities = 392/467 (83%), Positives = 411/467 (88%), Gaps = 42/467 (8%)
Query: 1 MSSILPFTPPIVKRLLGWKK----------GEQNGQEEKWCEKAVKSLVKKLKKTGQLDE 50
MSSILPFTPP+VKRLLGWKK GEQNGQEEKWCEKAVKSLVKKLKKTG+LDE
Sbjct: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
Query: 51 LEKAITTQNVNTKCITIP------------------------------RSLDGRLQVSHR 80
LEKAITTQN NTKC+TIP RSLDGRLQVSHR
Sbjct: 61 LEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHR 120
Query: 81 KGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDEVCVNPYHYQRVETPVLPPVLV 140
KGLPHVIYCRLWRWPDLHSHHEL+A+E CE+AFN+KKDEVCVNPYHYQRVETPVLPPVLV
Sbjct: 121 KGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLV 180
Query: 141 PRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSN-IPETPPPGYLSEDGETSDHQMNHS 199
PRHTEI E PPLDDY+HSIPENTNFPAGIEPQSN IPETPPPGY+SEDGETSD Q+N S
Sbjct: 181 PRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQS 240
Query: 200 MDAGSP-NLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVD 258
MD GSP LSP +SP +++LDLQPVTY EPAFWCSI+YYELNQRVGETFHASQPS+TVD
Sbjct: 241 MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVD 300
Query: 259 GFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP 318
GFTDPSNSERFCLGLLSNVNRNA VE+TRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP
Sbjct: 301 GFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP 360
Query: 319 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK 378
NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK
Sbjct: 361 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK 420
Query: 379 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPS+RCSS+S
Sbjct: 421 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
>gi|223029442 mothers against decapentaplegic homolog 3 isoform 3
[Homo sapiens]
Length = 381
Score = 763 bits (1971), Expect = 0.0
Identities = 359/366 (98%), Positives = 361/366 (98%)
Query: 60 VNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDE 119
V+ K + RSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDE
Sbjct: 16 VHRKAWWMGRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDE 75
Query: 120 VCVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPET 179
VCVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPET
Sbjct: 76 VCVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPET 135
Query: 180 PPPGYLSEDGETSDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYE 239
PPPGYLSEDGETSDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYE
Sbjct: 136 PPPGYLSEDGETSDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYE 195
Query: 240 LNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYI 299
LNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYI
Sbjct: 196 LNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYI 255
Query: 300 GGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQG 359
GGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQG
Sbjct: 256 GGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQG 315
Query: 360 FEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSI 419
FEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSI
Sbjct: 316 FEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSI 375
Query: 420 RCSSVS 425
RCSSVS
Sbjct: 376 RCSSVS 381
>gi|223029440 mothers against decapentaplegic homolog 3 isoform 2
[Homo sapiens]
Length = 320
Score = 680 bits (1755), Expect = 0.0
Identities = 320/320 (100%), Positives = 320/320 (100%)
Query: 106 MELCEFAFNMKKDEVCVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTN 165
MELCEFAFNMKKDEVCVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTN
Sbjct: 1 MELCEFAFNMKKDEVCVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTN 60
Query: 166 FPAGIEPQSNIPETPPPGYLSEDGETSDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQPVT 225
FPAGIEPQSNIPETPPPGYLSEDGETSDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQPVT
Sbjct: 61 FPAGIEPQSNIPETPPPGYLSEDGETSDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQPVT 120
Query: 226 YCEPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVEL 285
YCEPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVEL
Sbjct: 121 YCEPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVEL 180
Query: 286 TRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNN 345
TRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNN
Sbjct: 181 TRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNN 240
Query: 346 QEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQ 405
QEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQ
Sbjct: 241 QEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQ 300
Query: 406 WLDKVLTQMGSPSIRCSSVS 425
WLDKVLTQMGSPSIRCSSVS
Sbjct: 301 WLDKVLTQMGSPSIRCSSVS 320
>gi|47778931 SMAD, mothers against DPP homolog 5 [Homo sapiens]
Length = 465
Score = 563 bits (1451), Expect = e-160
Identities = 284/468 (60%), Positives = 336/468 (71%), Gaps = 49/468 (10%)
Query: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKT-GQLDELEKAITTQN 59
M+S+ FT P VKRLLGWK+G++ EEKW EKAV +LVKKLKK G ++ELEKA+++
Sbjct: 4 MASLFSFTSPAVKRLLGWKQGDE---EEKWAEKAVDALVKKLKKKKGAMEELEKALSSPG 60
Query: 60 VNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDE 119
+KC+TIPRSLDGRLQVSHRKGLPHVIYCR+WRWPDL SHHEL+ +++CEF F K+ E
Sbjct: 61 QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKE 120
Query: 120 VCVNPYHYQRVETPVLPPVLVPRHTE------IPAEFPPLDDYSHSIPENTNFPAGIEPQ 173
VC+NPYHY+RVE+PVLPPVLVPRH E + +F L +P+N FP
Sbjct: 121 VCINPYHYKRVESPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFPDSFHQP 180
Query: 174 SNIP-----------------------------------ETPPPGYLSEDGETSDHQMNH 198
+N P +TPPP Y+ D + +
Sbjct: 181 NNTPFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDN-SQ 239
Query: 199 SMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVD 258
MD S N+ P M P+ ++ D+QPV Y EP WCSI YYELN RVGE FHAS S+ VD
Sbjct: 240 PMDT-SNNMIPQIM-PSISSRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVD 297
Query: 259 GFTDPSNSE-RFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQS 317
GFTDPSN++ RFCLGLLSNVNRN+ +E TRRHIG+GV LYY+GGEV+AECLSDS+IFVQS
Sbjct: 298 GFTDPSNNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQS 357
Query: 318 PNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFV 377
NCN +G+HP TVCKIP C+LKIFNNQEFA LLAQSVN GFEAVY+LT+MCTIRMSFV
Sbjct: 358 RNCNFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFV 417
Query: 378 KGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
KGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVLTQMGSP SSVS
Sbjct: 418 KGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS 465
>gi|47778929 SMAD, mothers against DPP homolog 5 [Homo sapiens]
Length = 465
Score = 563 bits (1451), Expect = e-160
Identities = 284/468 (60%), Positives = 336/468 (71%), Gaps = 49/468 (10%)
Query: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKT-GQLDELEKAITTQN 59
M+S+ FT P VKRLLGWK+G++ EEKW EKAV +LVKKLKK G ++ELEKA+++
Sbjct: 4 MASLFSFTSPAVKRLLGWKQGDE---EEKWAEKAVDALVKKLKKKKGAMEELEKALSSPG 60
Query: 60 VNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDE 119
+KC+TIPRSLDGRLQVSHRKGLPHVIYCR+WRWPDL SHHEL+ +++CEF F K+ E
Sbjct: 61 QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKE 120
Query: 120 VCVNPYHYQRVETPVLPPVLVPRHTE------IPAEFPPLDDYSHSIPENTNFPAGIEPQ 173
VC+NPYHY+RVE+PVLPPVLVPRH E + +F L +P+N FP
Sbjct: 121 VCINPYHYKRVESPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFPDSFHQP 180
Query: 174 SNIP-----------------------------------ETPPPGYLSEDGETSDHQMNH 198
+N P +TPPP Y+ D + +
Sbjct: 181 NNTPFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDN-SQ 239
Query: 199 SMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVD 258
MD S N+ P M P+ ++ D+QPV Y EP WCSI YYELN RVGE FHAS S+ VD
Sbjct: 240 PMDT-SNNMIPQIM-PSISSRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVD 297
Query: 259 GFTDPSNSE-RFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQS 317
GFTDPSN++ RFCLGLLSNVNRN+ +E TRRHIG+GV LYY+GGEV+AECLSDS+IFVQS
Sbjct: 298 GFTDPSNNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQS 357
Query: 318 PNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFV 377
NCN +G+HP TVCKIP C+LKIFNNQEFA LLAQSVN GFEAVY+LT+MCTIRMSFV
Sbjct: 358 RNCNFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFV 417
Query: 378 KGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
KGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVLTQMGSP SSVS
Sbjct: 418 KGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS 465
>gi|47778925 SMAD, mothers against DPP homolog 5 [Homo sapiens]
Length = 465
Score = 563 bits (1451), Expect = e-160
Identities = 284/468 (60%), Positives = 336/468 (71%), Gaps = 49/468 (10%)
Query: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKT-GQLDELEKAITTQN 59
M+S+ FT P VKRLLGWK+G++ EEKW EKAV +LVKKLKK G ++ELEKA+++
Sbjct: 4 MASLFSFTSPAVKRLLGWKQGDE---EEKWAEKAVDALVKKLKKKKGAMEELEKALSSPG 60
Query: 60 VNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDE 119
+KC+TIPRSLDGRLQVSHRKGLPHVIYCR+WRWPDL SHHEL+ +++CEF F K+ E
Sbjct: 61 QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKE 120
Query: 120 VCVNPYHYQRVETPVLPPVLVPRHTE------IPAEFPPLDDYSHSIPENTNFPAGIEPQ 173
VC+NPYHY+RVE+PVLPPVLVPRH E + +F L +P+N FP
Sbjct: 121 VCINPYHYKRVESPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFPDSFHQP 180
Query: 174 SNIP-----------------------------------ETPPPGYLSEDGETSDHQMNH 198
+N P +TPPP Y+ D + +
Sbjct: 181 NNTPFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDN-SQ 239
Query: 199 SMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVD 258
MD S N+ P M P+ ++ D+QPV Y EP WCSI YYELN RVGE FHAS S+ VD
Sbjct: 240 PMDT-SNNMIPQIM-PSISSRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVD 297
Query: 259 GFTDPSNSE-RFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQS 317
GFTDPSN++ RFCLGLLSNVNRN+ +E TRRHIG+GV LYY+GGEV+AECLSDS+IFVQS
Sbjct: 298 GFTDPSNNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQS 357
Query: 318 PNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFV 377
NCN +G+HP TVCKIP C+LKIFNNQEFA LLAQSVN GFEAVY+LT+MCTIRMSFV
Sbjct: 358 RNCNFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFV 417
Query: 378 KGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
KGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVLTQMGSP SSVS
Sbjct: 418 KGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS 465
>gi|51173727 Sma- and Mad-related protein 1 [Homo sapiens]
Length = 465
Score = 555 bits (1431), Expect = e-158
Identities = 286/471 (60%), Positives = 333/471 (70%), Gaps = 54/471 (11%)
Query: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKT-GQLDELEKAITTQN 59
++S+ FT P VKRLLGWK+G++ EEKW EKAV +LVKKLKK G ++ELEKA++
Sbjct: 3 VTSLFSFTSPAVKRLLGWKQGDE---EEKWAEKAVDALVKKLKKKKGAMEELEKALSCPG 59
Query: 60 VNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDE 119
+ C+TIPRSLDGRLQVSHRKGLPHVIYCR+WRWPDL SHHEL+ +E CEF F K+ E
Sbjct: 60 QPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKE 119
Query: 120 VCVNPYHYQRVETPVLPPVLVPRHTE------IPAEFPPLDDYSHSIPENTNFPAGIE-- 171
VC+NPYHY+RVE+PVLPPVLVPRH+E + A+F L +P N FP +
Sbjct: 120 VCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQP 179
Query: 172 --------PQSNIP---------------------------ETPPPGYLS-EDGETSDHQ 195
P S+ P +TPPP YL ED T D
Sbjct: 180 NSHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDG- 238
Query: 196 MNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSM 255
+ MD N+ P+ N D+Q V Y EP WCSI YYELN RVGE FHAS S+
Sbjct: 239 -SQPMDT---NMMAPPLPSEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSV 294
Query: 256 TVDGFTDPSNSE-RFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIF 314
VDGFTDPSN++ RFCLGLLSNVNRN+ +E TRRHIG+GV LYY+GGEV+AECLSDS+IF
Sbjct: 295 LVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIF 354
Query: 315 VQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRM 374
VQS NCN +G+HP TVCKIP GC+LKIFNNQEFA LLAQSVN GFE VY+LT+MCTIRM
Sbjct: 355 VQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRM 414
Query: 375 SFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
SFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVLTQMGSP SSVS
Sbjct: 415 SFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 465
>gi|5174509 Sma- and Mad-related protein 1 [Homo sapiens]
Length = 465
Score = 555 bits (1431), Expect = e-158
Identities = 286/471 (60%), Positives = 333/471 (70%), Gaps = 54/471 (11%)
Query: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKT-GQLDELEKAITTQN 59
++S+ FT P VKRLLGWK+G++ EEKW EKAV +LVKKLKK G ++ELEKA++
Sbjct: 3 VTSLFSFTSPAVKRLLGWKQGDE---EEKWAEKAVDALVKKLKKKKGAMEELEKALSCPG 59
Query: 60 VNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDE 119
+ C+TIPRSLDGRLQVSHRKGLPHVIYCR+WRWPDL SHHEL+ +E CEF F K+ E
Sbjct: 60 QPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKE 119
Query: 120 VCVNPYHYQRVETPVLPPVLVPRHTE------IPAEFPPLDDYSHSIPENTNFPAGIE-- 171
VC+NPYHY+RVE+PVLPPVLVPRH+E + A+F L +P N FP +
Sbjct: 120 VCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQP 179
Query: 172 --------PQSNIP---------------------------ETPPPGYLS-EDGETSDHQ 195
P S+ P +TPPP YL ED T D
Sbjct: 180 NSHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDG- 238
Query: 196 MNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSM 255
+ MD N+ P+ N D+Q V Y EP WCSI YYELN RVGE FHAS S+
Sbjct: 239 -SQPMDT---NMMAPPLPSEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSV 294
Query: 256 TVDGFTDPSNSE-RFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIF 314
VDGFTDPSN++ RFCLGLLSNVNRN+ +E TRRHIG+GV LYY+GGEV+AECLSDS+IF
Sbjct: 295 LVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIF 354
Query: 315 VQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRM 374
VQS NCN +G+HP TVCKIP GC+LKIFNNQEFA LLAQSVN GFE VY+LT+MCTIRM
Sbjct: 355 VQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRM 414
Query: 375 SFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
SFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVLTQMGSP SSVS
Sbjct: 415 SFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 465
>gi|5174519 SMAD family member 9 isoform b [Homo sapiens]
Length = 430
Score = 555 bits (1429), Expect = e-158
Identities = 277/436 (63%), Positives = 331/436 (75%), Gaps = 23/436 (5%)
Query: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKT-GQLDELEKAITTQN 59
+SS+ FT P VKRLLGWK+G++ EEKW EKAV SLVKKLKK G +DELE+A++
Sbjct: 7 ISSLFSFTSPAVKRLLGWKQGDE---EEKWAEKAVDSLVKKLKKKKGAMDELERALSCPG 63
Query: 60 VNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDE 119
+KC+TIPRSLDGRLQVSHRKGLPHVIYCR+WRWPDL SHHEL+ +E CEF F K+ E
Sbjct: 64 QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKE 123
Query: 120 VCVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYS----HS---IPENTNFPAGIE- 171
VC+NPYHY+RVETPVLPPVLVPRH+E + L + HS +P N +P +
Sbjct: 124 VCINPYHYRRVETPVLPPVLVPRHSEYNPQLSLLAKFRSASLHSEPLMPHNATYPDSFQQ 183
Query: 172 -PQSNIPETPPPGYLSEDGETSDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPA 230
P S +P +P + S ++ GSP+ P SP + + D +PV Y EP
Sbjct: 184 PPCSALPPSPSHAF-----SQSPCTASYPHSPGSPS---EPESP-YQHSDFRPVCYEEPQ 234
Query: 231 FWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSE-RFCLGLLSNVNRNAAVELTRRH 289
WCS++YYELN RVGETF AS S+ +DGFTDPSN+ RFCLGLLSNVNRN+ +E TRRH
Sbjct: 235 HWCSVAYYELNNRVGETFQASSRSVLIDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRH 294
Query: 290 IGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFA 349
IG+GV LYY+GGEV+AEC+SDS+IFVQS NCN ++G+HPATVCKIP GC+LK+FNNQ FA
Sbjct: 295 IGKGVHLYYVGGEVYAECVSDSSIFVQSRNCNYQHGFHPATVCKIPSGCSLKVFNNQLFA 354
Query: 350 ALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDK 409
LLAQSV+ GFE VY+LT+MCTIRMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDK
Sbjct: 355 QLLAQSVHHGFEVVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDK 414
Query: 410 VLTQMGSPSIRCSSVS 425
VLTQMGSP SSVS
Sbjct: 415 VLTQMGSPHNPISSVS 430
>gi|187828357 SMAD family member 9 isoform a [Homo sapiens]
Length = 467
Score = 548 bits (1411), Expect = e-156
Identities = 281/465 (60%), Positives = 335/465 (72%), Gaps = 44/465 (9%)
Query: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKT-GQLDELEKAITTQN 59
+SS+ FT P VKRLLGWK+G++ EEKW EKAV SLVKKLKK G +DELE+A++
Sbjct: 7 ISSLFSFTSPAVKRLLGWKQGDE---EEKWAEKAVDSLVKKLKKKKGAMDELERALSCPG 63
Query: 60 VNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDE 119
+KC+TIPRSLDGRLQVSHRKGLPHVIYCR+WRWPDL SHHEL+ +E CEF F K+ E
Sbjct: 64 QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKE 123
Query: 120 VCVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYS----HS---IPENTNFPAGIE- 171
VC+NPYHY+RVETPVLPPVLVPRH+E + L + HS +P N +P +
Sbjct: 124 VCINPYHYRRVETPVLPPVLVPRHSEYNPQLSLLAKFRSASLHSEPLMPHNATYPDSFQQ 183
Query: 172 -PQSNIPETPP---------------PGYLSEDGETSDHQMN------HSMDAGSPNLSP 209
P S +P +P PG SE H ++ H+ +A S S
Sbjct: 184 PPCSALPPSPSHAFSQSPCTASYPHSPGSPSEPESPYQHSVDTPPLPYHATEA-SETQSG 242
Query: 210 NPMSPAHN--------NLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVDGFT 261
P+ + N D +PV Y EP WCS++YYELN RVGETF AS S+ +DGFT
Sbjct: 243 QPVDATADRHVVLSIPNGDFRPVCYEEPQHWCSVAYYELNNRVGETFQASSRSVLIDGFT 302
Query: 262 DPSNSE-RFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNC 320
DPSN+ RFCLGLLSNVNRN+ +E TRRHIG+GV LYY+GGEV+AEC+SDS+IFVQS NC
Sbjct: 303 DPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECVSDSSIFVQSRNC 362
Query: 321 NQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGW 380
N ++G+HPATVCKIP GC+LK+FNNQ FA LLAQSV+ GFE VY+LT+MCTIRMSFVKGW
Sbjct: 363 NYQHGFHPATVCKIPSGCSLKVFNNQLFAQLLAQSVHHGFEVVYELTKMCTIRMSFVKGW 422
Query: 381 GAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
GAEY RQ VTSTPCWIE+HL+GPLQWLDKVLTQMGSP SSVS
Sbjct: 423 GAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 467
>gi|223029444 mothers against decapentaplegic homolog 3 isoform 4
[Homo sapiens]
Length = 230
Score = 487 bits (1253), Expect = e-137
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 196 MNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSM 255
MNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSM
Sbjct: 1 MNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSM 60
Query: 256 TVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFV 315
TVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFV
Sbjct: 61 TVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFV 120
Query: 316 QSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMS 375
QSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMS
Sbjct: 121 QSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMS 180
Query: 376 FVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
FVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS
Sbjct: 181 FVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 230
>gi|4885457 mothers against decapentaplegic homolog 4 [Homo sapiens]
Length = 552
Score = 272 bits (696), Expect = 4e-73
Identities = 189/518 (36%), Positives = 253/518 (48%), Gaps = 128/518 (24%)
Query: 23 QNGQEEKWCEKAVKSLVKKLK-KTGQLDELEKAITTQNVN-TKCITIPRSLDGRLQVSHR 80
Q G+ E + ++A++SLVKKLK K +LD L AITT + +KC+TI R+LDGRLQV+ R
Sbjct: 28 QGGESETFAKRAIESLVKKLKEKKDELDSLITAITTNGAHPSKCVTIQRTLDGRLQVAGR 87
Query: 81 KGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDEVCVNPYHYQRVETPVLPPVLV 140
KG PHVIY RLWRWPDLH +EL+ ++ C++AF++K D VCVNPYHY+RV +P + +
Sbjct: 88 KGFPHVIYARLWRWPDLHK-NELKHVKYCQYAFDLKCDSVCVNPYHYERVVSPGIDLSGL 146
Query: 141 PRHTEIPAEFPPLDDYSHSI-------------------PEN------------------ 163
+ P+ D+Y H P N
Sbjct: 147 TLQSNAPSSMMVKDEYVHDFEGQPSLSTEGHSIQTIQHPPSNRASTETYSTPALLAPSES 206
Query: 164 ---------------TNFPAGI------EPQSNIPETPPPGYLSEDGETSD----HQMNH 198
T+ PA I E I P PG ++G T H +
Sbjct: 207 NATSTANFPNIPVASTSQPASILGGSHSEGLLQIASGPQPGQ-QQNGFTGQPATYHHNST 265
Query: 199 SMDAGSPNLSPNPMSPAHNNLDLQ----------------------PVTYCEPA--FWCS 234
+ GS P P H N LQ P PA +WCS
Sbjct: 266 TTWTGSRTAPYTPNLPHHQNGHLQHHPPMPPHPGHYWPVHNELAFQPPISNHPAPEYWCS 325
Query: 235 ISYYELNQRVGETFH--ASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGR 292
I+Y+E++ +VGETF +S P +TVDG+ DPS +RFCLG LSNV+R A+E R HIG+
Sbjct: 326 IAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGK 385
Query: 293 GVRLYYIG-GEVFAECLSDSAIFVQSPNCNQRYGWHPA-TVCKIPPGCNLKIFN------ 344
GV+L G G+V+ CLSD A+FVQS ++ G P V KI P +K+F+
Sbjct: 386 GVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHR 445
Query: 345 --NQEFAALLAQSVNQGFE--------------------------AVYQLTRMCTIRMSF 376
Q+ A A + Q V L R+C +RMSF
Sbjct: 446 QMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAPAISLSAAAGIGVDDLRRLCILRMSF 505
Query: 377 VKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQM 414
VKGWG +Y RQ++ TPCWIE+HL+ LQ LD+VL M
Sbjct: 506 VKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTM 543
>gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens]
Length = 496
Score = 139 bits (351), Expect = 4e-33
Identities = 114/371 (30%), Positives = 174/371 (46%), Gaps = 57/371 (15%)
Query: 37 SLVKKLKKTGQLDELEKAITTQN-VNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWP 95
SL+K+LK+ LD L +A+ ++ V C+ +PR+ L++ + P ++ RL+RWP
Sbjct: 178 SLLKRLKERS-LDTLLEAVESRGGVPGGCVLVPRA---DLRLGGQPAPPQLLLGRLFRWP 233
Query: 96 DLHSHHELRAMELCE-FAFNMKKDEVCVNPYHYQRVETPVLPPVLVPRHTEIPA--EFPP 152
DL EL+ + C FA VC NPYH+ R+ P PP P ++ + E+ P
Sbjct: 234 DLQHAVELKPLCGCHSFAAAADGPTVCCNPYHFSRLCGPESPP---PPYSRLSPRDEYKP 290
Query: 153 LDDYSHSIPENTNFPAGIEPQSNIPETPPPGYLSEDGETSDHQMNHSMDAGSPNLSPNPM 212
LD + ++T E +++ P GE SD M SP+
Sbjct: 291 LD-----LSDSTLSYTETEATNSLITAP--------GEFSDASM-----------SPDAT 326
Query: 213 SPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLG 272
P+H WCS++Y+E RVG + ++++ F D FCLG
Sbjct: 327 KPSH---------------WCSVAYWEHRTRVGRLYAVYDQAVSI--FYDLPQGSGFCLG 369
Query: 273 LLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVC 332
L+ R+ +V TR IG G+ L V+A + IFV SP + G V
Sbjct: 370 QLNLEQRSESVRRTRSKIGFGILLSKEPDGVWAYNRGEHPIFVNSPTLDAP-GGRALVVR 428
Query: 333 KIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTST 392
K+PPG ++K+F + E + L + Y ++R+SF KGWG Y RQ +TS
Sbjct: 429 KVPPGYSIKVF-DFERSGLQHAPEPDAADGPYDPN---SVRISFAKGWGPCYSRQFITSC 484
Query: 393 PCWIELHLNGP 403
PCW+E+ LN P
Sbjct: 485 PCWLEILLNNP 495
>gi|5174517 SMAD family member 7 [Homo sapiens]
Length = 426
Score = 127 bits (318), Expect = 3e-29
Identities = 108/377 (28%), Positives = 177/377 (46%), Gaps = 62/377 (16%)
Query: 37 SLVKKLKKTGQLDELEKAITTQN-VNTKCITIPRSLDGRL-----------QVSHRKGLP 84
S++KKLK+ QL+ L +A+ ++ T C+ +P LD RL Q LP
Sbjct: 98 SVLKKLKER-QLELLLQAVESRGGTRTACLLLPGRLDCRLGPGAPAGAQPAQPPSSYSLP 156
Query: 85 HVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDEVCVNPYHYQRVETPVLPPVLVPRHT 144
++ C+++RWPDL E++ + CE + + VC NP+H R+ PP P ++
Sbjct: 157 -LLLCKVFRWPDLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRLCELESPP---PPYS 212
Query: 145 EIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETPPPGYLSEDGETSDHQMNHSMDAGS 204
P +F ++P ++ P+ P ET G+
Sbjct: 213 RYPMDF-------------------LKPTADCPDAVP-----SSAET----------GGT 238
Query: 205 PNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPS 264
L+P +S + L L+P + + WC ++Y+E RVG + +PS+ D F D
Sbjct: 239 NYLAPGGLS--DSQLLLEP---GDRSHWCVVAYWEEKTRVGRLYCVQEPSL--DIFYDLP 291
Query: 265 NSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRY 324
FCLG L++ N++ V+ R IG G++L V+ S IF++S +
Sbjct: 292 QGNGFCLGQLNSDNKSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPD 351
Query: 325 GWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEY 384
V K+ PG ++K F+ ++ +L Q N E + Q T+++SFVKGWG Y
Sbjct: 352 S-RTLLVHKVFPGFSIKAFDYEKAYSL--QRPND-HEFMQQPWTGFTVQISFVKGWGQCY 407
Query: 385 RRQTVTSTPCWIELHLN 401
RQ ++S PCW+E+ N
Sbjct: 408 TRQFISSCPCWLEVIFN 424
>gi|218749837 SMAD family member 6 isoform 2 [Homo sapiens]
Length = 235
Score = 101 bits (252), Expect = 1e-21
Identities = 74/235 (31%), Positives = 115/235 (48%), Gaps = 21/235 (8%)
Query: 178 ETPPPGY--LSEDGE-----TSDHQMNHSMDAGSPNL--SPNPMSPAHNNLDLQPVTYCE 228
++PPP Y LS E SD ++++ + +L +P S A + D +
Sbjct: 12 KSPPPPYSRLSPRDEYKPLDLSDSTLSYTETEATNSLITAPGEFSDASMSPDAT-----K 66
Query: 229 PAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRR 288
P+ WCS++Y+E RVG + ++++ F D FCLG L+ R+ +V TR
Sbjct: 67 PSHWCSVAYWEHRTRVGRLYAVYDQAVSI--FYDLPQGSGFCLGQLNLEQRSESVRRTRS 124
Query: 289 HIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEF 348
IG G+ L V+A + IFV SP + G V K+PPG ++K+F+ +
Sbjct: 125 KIGFGILLSKEPDGVWAYNRGEHPIFVNSPTLDAP-GGRALVVRKVPPGYSIKVFDFERS 183
Query: 349 AALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGP 403
A + + Y ++R+SF KGWG Y RQ +TS PCW+E+ LN P
Sbjct: 184 GLQHAPEPDAA-DGPYDPN---SVRISFAKGWGPCYSRQFITSCPCWLEILLNNP 234
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 34.7 bits (78), Expect = 0.17
Identities = 19/50 (38%), Positives = 22/50 (44%)
Query: 136 PPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETPPPGYL 185
PP LVP E P E PP+ S+ P + P P S P T YL
Sbjct: 135 PPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYL 184
Score = 29.6 bits (65), Expect = 5.4
Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 6/103 (5%)
Query: 128 QRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETPPPGYLSE 187
Q++ + VL P H P PP + + P +P P P +
Sbjct: 65 QQMHQKQMQCVLQPHHLPPPPLPPP------PVMPGGGYGDWQPPPPPMPPPPGPALSYQ 118
Query: 188 DGETSDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPA 230
+ HQM H G P L P + + + P +Y P+
Sbjct: 119 KQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPS 161
>gi|239757414 PREDICTED: hypothetical protein XP_002345432 [Homo
sapiens]
Length = 176
Score = 33.9 bits (76), Expect = 0.29
Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 121 CVNPYHYQRVETPVLPPVLVPR---HTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIP 177
C P+ +R T LPP L P H+ P P + P+ PA + PQ P
Sbjct: 75 CTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGGPCQGSARFSPD----PAAVRPQ---P 127
Query: 178 ETPPPGYLSEDGETSDHQMNHSMDAGSPNLSPNP 211
P P S D + ++ G+P SP P
Sbjct: 128 RGPQPDSGSARQVPPDSRGAQALHRGAPLASPAP 161
>gi|110611908 mitogen-activated protein kinase kinase kinase kinase
1 isoform 1 [Homo sapiens]
Length = 821
Score = 32.7 bits (73), Expect = 0.64
Identities = 45/202 (22%), Positives = 73/202 (36%), Gaps = 30/202 (14%)
Query: 35 VKSLVKKLKKTGQLDELEKAITTQNVNTKCITIPRSLDGRLQVSHRK---GLPHVIYCRL 91
+ L+ KLK G K + ++ + +P ++ R++ +HR G+P CR
Sbjct: 284 ILDLLDKLKNPG------KGPSIGDIEDEEPELPPAIPRRIRSTHRSSSLGIPDADCCR- 336
Query: 92 WRWPDLHSHHELRAMELCEFAFNMKKDEVCVNPYHYQRVETPVLPPVLVPRHTEIPAEFP 151
H E R + E P + R++ P PR +
Sbjct: 337 -------RHMEFRKLRGMETR----------PPANTARLQPPRDLRSSSPRKQLSESSDD 379
Query: 152 PLDDYSHSIP-ENTNFPAGIEPQSNIPETPPPGYLSEDGETSDHQMNHSMDAGSPNLSPN 210
DD P E+T P +P+ P PG + +DG+ S + PN SP
Sbjct: 380 DYDDVDIPTPAEDTPPPLPPKPKFRSPSDEGPGSMGDDGQLSPGVLVRCASGPPPN-SPR 438
Query: 211 PMSPAHNNLDLQPVTYCEPAFW 232
P P + + EP+ W
Sbjct: 439 P-GPPPSTSSPHLTAHSEPSLW 459
>gi|6005810 mitogen-activated protein kinase kinase kinase kinase 1
isoform 2 [Homo sapiens]
Length = 833
Score = 32.7 bits (73), Expect = 0.64
Identities = 45/202 (22%), Positives = 73/202 (36%), Gaps = 30/202 (14%)
Query: 35 VKSLVKKLKKTGQLDELEKAITTQNVNTKCITIPRSLDGRLQVSHRK---GLPHVIYCRL 91
+ L+ KLK G K + ++ + +P ++ R++ +HR G+P CR
Sbjct: 284 ILDLLDKLKNPG------KGPSIGDIEDEEPELPPAIPRRIRSTHRSSSLGIPDADCCR- 336
Query: 92 WRWPDLHSHHELRAMELCEFAFNMKKDEVCVNPYHYQRVETPVLPPVLVPRHTEIPAEFP 151
H E R + E P + R++ P PR +
Sbjct: 337 -------RHMEFRKLRGMETR----------PPANTARLQPPRDLRSSSPRKQLSESSDD 379
Query: 152 PLDDYSHSIP-ENTNFPAGIEPQSNIPETPPPGYLSEDGETSDHQMNHSMDAGSPNLSPN 210
DD P E+T P +P+ P PG + +DG+ S + PN SP
Sbjct: 380 DYDDVDIPTPAEDTPPPLPPKPKFRSPSDEGPGSMGDDGQLSPGVLVRCASGPPPN-SPR 438
Query: 211 PMSPAHNNLDLQPVTYCEPAFW 232
P P + + EP+ W
Sbjct: 439 P-GPPPSTSSPHLTAHSEPSLW 459
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 32.7 bits (73), Expect = 0.64
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 15/99 (15%)
Query: 131 ETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSN--IPETPPPGYLSED 188
E P LPP +P T IP+ PP P ++ P +P+ +PE P G S
Sbjct: 1525 EPPGLPPASLPESTPIPSSSPP--------PLSSPLPEAPQPKEEPPVPEAPSSGPPSSS 1576
Query: 189 GE-----TSDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQ 222
E T + S G +S + AHN L+
Sbjct: 1577 LELLASLTPEAFSLDSSLRGKQRMSKHNFLQAHNGQGLR 1615
>gi|217416343 fibrosin-like 1 [Homo sapiens]
Length = 1045
Score = 32.3 bits (72), Expect = 0.84
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 124 PYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYS-------HSIPENTNFPAGIEPQSNI 176
P+ + P P L+P H +PA +S H + +++ P G+ ++
Sbjct: 294 PHRHTPQPPPPQPRGLLPTH--VPASLGAFAGHSQAAANGLHGLSRSSSAPLGLGKHVSL 351
Query: 177 PETPPPGYLSEDG----ETSDHQMNHSMDAGSPNLSPNPMSPA 215
P +LS + HQ++ +M A P L P P PA
Sbjct: 352 SPHGPGPHLSTSHLALRSQAQHQLHAAMFAAPPTLPPPPALPA 394
>gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens]
Length = 922
Score = 32.0 bits (71), Expect = 1.1
Identities = 22/90 (24%), Positives = 32/90 (35%), Gaps = 13/90 (14%)
Query: 136 PPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETPPPGYLSEDGETSDHQ 195
PP H +P PP ++ P N AG+ P +N+ PPP Y T +
Sbjct: 167 PPSTYNPHKPVPYPIPPCRPHATIAPSAYN-NAGLVPLANVIAPPPPPYTPNPVGTENED 225
Query: 196 MNHSMDAGSPNLSPNPMSPAHNNLDLQPVT 225
++ NP P N P +
Sbjct: 226 LS------------NPSKPIQNQTFSTPAS 243
>gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens]
Length = 944
Score = 32.0 bits (71), Expect = 1.1
Identities = 22/90 (24%), Positives = 32/90 (35%), Gaps = 13/90 (14%)
Query: 136 PPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETPPPGYLSEDGETSDHQ 195
PP H +P PP ++ P N AG+ P +N+ PPP Y T +
Sbjct: 189 PPSTYNPHKPVPYPIPPCRPHATIAPSAYN-NAGLVPLANVIAPPPPPYTPNPVGTENED 247
Query: 196 MNHSMDAGSPNLSPNPMSPAHNNLDLQPVT 225
++ NP P N P +
Sbjct: 248 LS------------NPSKPIQNQTFSTPAS 265
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 31.2 bits (69), Expect = 1.9
Identities = 34/136 (25%), Positives = 45/136 (33%), Gaps = 24/136 (17%)
Query: 133 PVLPPVLVPRHTEIPAEFPPLDDYSHS-IPENTNFPAGIEPQSNIPETPPPGYLSEDGET 191
P PP L P + P PP +S P N P P + PPPG G +
Sbjct: 684 PPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPGLFFGLGSS 743
Query: 192 SDHQMNHSMDAGSPNLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHAS 251
S S P PA ++P +P +W I + +Q T
Sbjct: 744 S---------------SQCPRKPA-----IEPSCPMKPLYWTRIQISDRSQNATPTL--- 780
Query: 252 QPSMTVDGFTDPSNSE 267
S+ DPS E
Sbjct: 781 WDSLEEPDIRDPSEFE 796
>gi|154689780 son of sevenless homolog 2 [Homo sapiens]
Length = 1332
Score = 31.2 bits (69), Expect = 1.9
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Query: 136 PPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETPPPGYLSEDGETSDHQ 195
PP + PR P P + + + + P P+ +P+TPPP L +H
Sbjct: 1172 PPAIPPRQPPPPKVKPRVPVPTGAFDGPLHSPPPPPPRDPLPDTPPPVPL----RPPEHF 1227
Query: 196 MNHSMDAGSPNLSPNPMSPAHNNLD-LQPVTYC 227
+N NL P P+ H + D L+ ++ C
Sbjct: 1228 INCPF-----NLQPPPLGHLHRDSDWLRDISTC 1255
>gi|34452173 integrin alpha X precursor [Homo sapiens]
Length = 1163
Score = 31.2 bits (69), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 385 RRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSS 423
+R S W+ + LN W+D ++ +PS+RCSS
Sbjct: 962 QRDLPVSINFWVPVELNQEAVWMDVEVSHPQNPSLRCSS 1000
>gi|58219024 hypothetical protein LOC352999 [Homo sapiens]
Length = 330
Score = 30.8 bits (68), Expect = 2.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 165 NFPAGIEPQSNIPETPPPGYLSEDGETSDHQMNHSM 200
+F A + SN+ ET PP + G+ SD+++ +SM
Sbjct: 14 SFSASLAGTSNLSETEPPLWKESPGQLSDYRVENSM 49
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,473,267
Number of Sequences: 37866
Number of extensions: 1015736
Number of successful extensions: 2969
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 2867
Number of HSP's gapped (non-prelim): 88
length of query: 425
length of database: 18,247,518
effective HSP length: 105
effective length of query: 320
effective length of database: 14,271,588
effective search space: 4566908160
effective search space used: 4566908160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.