Guide to the Human Genome
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Name: CD2BP2 Sequence: fasta or formatted (341aa) NCBI GI: 5174409
Description:

CD2 antigen (cytoplasmic tail) binding protein 2

Referenced in:

T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         20           2
 C cysteine            0.6          2           1
 D aspartate           8.8         30           4
 E glutamate          10.6         36           3
 F phenylalanine       2.9         10           1
 G glycine            11.7         40           3
 H histidine           0.9          3           1
 I isoleucine          2.3          8           2
 K lysine              4.4         15           3
 L leucine             9.4         32           3
 M methionine          2.3          8           1
 N asparagine          2.3          8           1
 P proline             6.7         23           3
 Q glutamine           5.0         17           1
 R arginine            6.7         23           2
 S serine              6.5         22           2
 T threonine           4.4         15           1
 V valine              4.4         15           1
 W tryptophan          1.5          5           1
 Y tyrosine            2.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD2 antigen (cytoplasmic tail) binding protein 2 [Hom... 
NCL                   0.022   nucleolin 
ANK3                  0.016   ankyrin 3 isoform 1 
SPARCL1               0.016   SPARC-like 1 
SPARCL1               0.016   SPARC-like 1 
GTF2F1                0.015   general transcription factor IIF, polypeptide 1, 74...
LOC645321             0.012   PREDICTED: hypothetical protein 
FAM21C                0.012   hypothetical protein LOC253725 
NPM1                  0.012   nucleophosmin 1 isoform 3 
NPM1                  0.012   nucleophosmin 1 isoform 1 
LOC730429             0.012   PREDICTED: similar to ubiquitin protein ligase E3 c...
LOC730429             0.012   PREDICTED: similar to ubiquitin protein ligase E3 c...
UBR5                  0.012   ubiquitin protein ligase E3 component n-recognin 5 [...
TMEM119               0.012   transmembrane protein 119 
FAM21A                0.012   hypothetical protein LOC387680 
FAM21B                0.012   hypothetical protein LOC55747 
C7orf51               0.012   hypothetical protein FLJ37538 
HDAC5                 0.010   histone deacetylase 5 isoform 3 
HDAC5                 0.010   histone deacetylase 5 isoform 1 
ZRANB2                0.010   zinc finger protein 265 isoform 1 
ZRANB2                0.010   zinc finger protein 265 isoform 2 
GPIHBP1               0.010   glycosylphosphatidylinositol anchored high density l...
PRDM2                 0.010   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.010   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.010   retinoblastoma protein-binding zinc finger protein i...
EIF5B                 0.010   eukaryotic translation initiation factor 5B 
GPATCH3               0.010   G patch domain containing 3 
CENPB                 0.010   centromere protein B 
LOC100292392          0.010   PREDICTED: hypothetical protein 
LOC100287377          0.010   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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