ZMAT5 31829

Name: ZMAT5	Sequence: fasta or formatted (170aa)		NCBI GI: 51173755
Description: zinc finger, matrin type 5		Referenced in: Capping and Splicing
Other entries for this name: alt mRNA [170aa] zinc finger, matrin type 5
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 10 3 C cysteine 2.9 5 1 D aspartate 5.9 10 1 E glutamate 7.6 13 3 F phenylalanine 4.1 7 1 G glycine 5.3 9 2 H histidine 2.9 5 1 I isoleucine 1.8 3 1 K lysine 5.9 10 2 L leucine 11.2 19 2 M methionine 1.8 3 1 N asparagine 2.9 5 1 P proline 8.8 15 3 Q glutamine 5.9 10 1 R arginine 10.0 17 2 S serine 5.9 10 2 T threonine 1.8 3 2 V valine 3.5 6 1 W tryptophan 3.5 6 1 Y tyrosine 2.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 zinc finger, matrin type 5 ZMAT5 1.000 zinc finger, matrin type 5 ZFP36 0.038 zinc finger protein 36, C3H type, homolog SF3A2 0.026 splicing factor 3a, subunit 2 ZC3H13 0.026 zinc finger CCCH-type containing 13 MYH14 0.023 myosin, heavy chain 14 isoform 1 MYH14 0.023 myosin, heavy chain 14 isoform 2 MYH14 0.023 myosin, heavy chain 14 isoform 3 ZGPAT 0.023 zinc finger, CCCH-type with G patch domain isoform ... ZGPAT 0.023 zinc finger, CCCH-type with G patch domain isoform ... ZGPAT 0.023 zinc finger, CCCH-type with G patch domain isoform ... BAI1 0.023 brain-specific angiogenesis inhibitor 1 precursor [... DHX57 0.023 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 ZC3H4 0.023 zinc finger CCCH-type containing 4 ZC3H15 0.023 erythropoietin 4 immediate early response ZC3H18 0.020 zinc finger CCCH-type containing 18 PPP1R10 0.020 protein phosphatase 1, regulatory subunit 10 PXK 0.020 PX domain containing serine/threonine kinase HDAC7 0.018 histone deacetylase 7 isoform d HDAC7 0.018 histone deacetylase 7 isoform a SNRPC 0.018 small nuclear ribonucleoprotein polypeptide C BAI3 0.018 brain-specific angiogenesis inhibitor 3 ZNF236 0.018 zinc finger protein 236 HCLS1 0.018 hematopoietic cell-specific Lyn substrate 1 ZFP36L2 0.015 zinc finger protein 36, C3H type-like 2 RBM26 0.015 RNA binding motif protein 26 WASL 0.015 Wiskott-Aldrich syndrome gene-like protein LOC729417 0.015 PREDICTED: hypothetical protein LOC729417 0.015 PREDICTED: hypothetical protein LOC729417 0.015 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.