ZGPAT 3280

Name: ZGPAT	Sequence: fasta or formatted (511aa)		NCBI GI: 133925791
Description: zinc finger, CCCH-type with G patch domain isoform c		Referenced in: RNA-binding Proteins Zinc Finger Proteins
Other entries for this name: alt prot [531aa] zinc finger, CCCH-type with G patch domain isoform a alt mRNA [511aa] zinc finger, CCCH-type with G patch domain isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.5 59 3 C cysteine 1.4 7 1 D aspartate 5.3 27 1 E glutamate 10.2 52 4 F phenylalanine 2.5 13 2 G glycine 9.6 49 2 H histidine 2.2 11 1 I isoleucine 1.8 9 1 K lysine 4.9 25 2 L leucine 9.8 50 3 M methionine 1.0 5 1 N asparagine 1.4 7 1 P proline 4.1 21 2 Q glutamine 6.1 31 2 R arginine 7.6 39 2 S serine 8.0 41 2 T threonine 4.5 23 1 V valine 5.3 27 2 W tryptophan 0.6 3 1 Y tyrosine 2.3 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 zinc finger, CCCH-type with G patch domain isoform ... ZGPAT 1.000 zinc finger, CCCH-type with G patch domain isoform ... ZGPAT 0.989 zinc finger, CCCH-type with G patch domain isoform ... TFIP11 0.030 tuftelin interacting protein 11 TFIP11 0.030 tuftelin interacting protein 11 SMNDC1 0.022 survival motor neuron domain containing 1 RBM10 0.016 RNA binding motif protein 10 isoform 1 RBM10 0.016 RNA binding motif protein 10 isoform 2 GPATCH2 0.015 G patch domain containing 2 FTSJD2 0.014 FtsJ methyltransferase domain containing 2 GPATCH8 0.014 G patch domain containing 8 HNRNPU 0.013 heterogeneous nuclear ribonucleoprotein U isoform b ... HNRNPU 0.013 heterogeneous nuclear ribonucleoprotein U isoform a ... MYH7B 0.013 myosin, heavy polypeptide 7B, cardiac muscle, beta ... CGREF1 0.013 cell growth regulator with EF-hand domain 1 SON 0.013 SON DNA-binding protein isoform F CCDC13 0.013 coiled-coil domain containing 13 DDRGK1 0.012 DDRGK domain containing 1 NEFM 0.012 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.012 neurofilament, medium polypeptide 150kDa isoform 2 ... IQSEC3 0.012 IQ motif and Sec7 domain 3 AEBP2 0.012 AE binding protein 2 isoform b AEBP2 0.012 AE binding protein 2 isoform a RILP 0.012 Rab interacting lysosomal protein PPM1E 0.011 protein phosphatase 1E SFRS4 0.011 splicing factor, arginine/serine-rich 4 LOC283685 0.011 PREDICTED: golgi autoantigen, golgin subfamily a-li... DEF6 0.011 differentially expressed in FDCP 6 homolog AKAP13 0.011 A-kinase anchor protein 13 isoform 1 AKAP13 0.011 A-kinase anchor protein 13 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.